RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 TMEM256Q8N2U0 113 aa14.32□□□□□ -0.12
SS18-218ENST00000581021 A0A1W2PPV4 95 aa14.31□□□□□ -0.12
SS18-218ENST00000581021 KLLNB2CW77 178 aa14.31□□□□□ -0.12
SS18-218ENST00000581021 ARL14EPLP0DKL9 152 aa14.31□□□□□ -0.12
SS18-218ENST00000581021 CDC34P49427 236 aaPredicted RBP14.31□□□□□ -0.12
SS18-218ENST00000581021 Q8TAT8 98 aa14.31□□□□□ -0.12
SS18-218ENST00000581021 RAB24Q969Q5 203 aa14.31□□□□□ -0.12
SS18-218ENST00000581021 DEFB131BA0A096LNP1 70 aa14.3□□□□□ -0.12
SS18-218ENST00000581021 TRAV12-3A0A0B4J271 114 aa14.3□□□□□ -0.12
SS18-218ENST00000581021 IGLL5B9A064 214 aa14.3□□□□□ -0.12
SS18-218ENST00000581021 STAG3L2P0CL84 134 aa14.3□□□□□ -0.12
SS18-218ENST00000581021 STAG3L3P0CL85 134 aa14.3□□□□□ -0.12
SS18-218ENST00000581021 HTN1P15515 57 aa14.3□□□□□ -0.12
SS18-218ENST00000581021 CD300CQ08708 224 aa14.3□□□□□ -0.12
SS18-218ENST00000581021 BTN1A1Q13410 526 aa14.3□□□□□ -0.12
SS18-218ENST00000581021 PQLC2Q6ZP29 291 aa14.3□□□□□ -0.12
SS18-218ENST00000581021 Q6ZQT7 251 aa14.3□□□□□ -0.12
SS18-218ENST00000581021 LYPD1Q8N2G4 141 aa14.3□□□□□ -0.12
SS18-218ENST00000581021 ZFAND2AQ8N6M9 145 aa14.3□□□□□ -0.12
SS18-218ENST00000581021 RNASE8Q8TDE3 154 aaKnown RBP14.3□□□□□ -0.12
SS18-218ENST00000581021 APLNQ9ULZ1 77 aa14.3□□□□□ -0.12
SS18-218ENST00000581021 KMT2AQ03164 3969 aa14.3□□□□□ -0.12
SS18-218ENST00000581021 H7BYZ3 331 aa14.29□□□□□ -0.12
SS18-218ENST00000581021 CRISP2P16562 243 aa14.29□□□□□ -0.12
SS18-218ENST00000581021 SERF2P84101 59 aa14.29□□□□□ -0.12
SS18-218ENST00000581021 ZNF726P1Q15940 193 aa14.29□□□□□ -0.12
SS18-218ENST00000581021 LINC00477Q96M19 166 aa14.29□□□□□ -0.12
SS18-218ENST00000581021 C20orf144Q9BQM9 153 aa14.29□□□□□ -0.12
SS18-218ENST00000581021 NIPSNAP3BQ9BS92 247 aa14.29□□□□□ -0.12
SS18-218ENST00000581021 BORCS7-ASMTA0A0B4J1R7 106 aa14.28□□□□□ -0.12
SS18-218ENST00000581021 LY6G6CO95867 125 aa14.28□□□□□ -0.12
SS18-218ENST00000581021 GNPNAT1Q96EK6 184 aaPredicted RBP14.28□□□□□ -0.12
SS18-218ENST00000581021 OTORQ9NRC9 128 aa14.28□□□□□ -0.12
SS18-218ENST00000581021 ZNF492Q9P255 531 aa14.28□□□□□ -0.12
SS18-218ENST00000581021 IGHV4-4A0A075B6R2 117 aa14.27□□□□□ -0.13
SS18-218ENST00000581021 C7orf71A4D174 169 aa14.27□□□□□ -0.13
SS18-218ENST00000581021 DIRC3C9JPN6 131 aa14.27□□□□□ -0.13
SS18-218ENST00000581021 HYLS1Q96M11 299 aa14.27□□□□□ -0.13
SS18-218ENST00000581021 TEX48A0A1B0GUV7 120 aa14.26□□□□□ -0.13
SS18-218ENST00000581021 ZNF324O75467 553 aaPredicted RBP14.26□□□□□ -0.13
SS18-218ENST00000581021 MBP02144 154 aa14.26□□□□□ -0.13
SS18-218ENST00000581021 SLC25A5P05141 298 aaKnown RBP14.26□□□□□ -0.13
SS18-218ENST00000581021 GCHFRP30047 84 aa14.26□□□□□ -0.13
SS18-218ENST00000581021 ZNF138P52744 262 aa14.26□□□□□ -0.13
SS18-218ENST00000581021 TMEM78Q5T7P6 136 aa14.26□□□□□ -0.13
SS18-218ENST00000581021 KCNRGQ8N5I3 272 aa14.26□□□□□ -0.13
SS18-218ENST00000581021 SUN5Q8TC36 379 aa14.26□□□□□ -0.13
SS18-218ENST00000581021 TMEM263Q8WUH6 116 aaKnown RBP14.26□□□□□ -0.13
SS18-218ENST00000581021 C16orf74Q96GX8 76 aa14.26□□□□□ -0.13
SS18-218ENST00000581021 RBAKDNA6NC62 111 aa14.25□□□□□ -0.13
SS18-218ENST00000581021 PGPA6NDG6 321 aa14.25□□□□□ -0.13
SS18-218ENST00000581021 TAAR5O14804 337 aa14.25□□□□□ -0.13
SS18-218ENST00000581021 RNASE4P34096 147 aaKnown RBP14.25□□□□□ -0.13
SS18-218ENST00000581021 GNG5P63218 68 aa14.25□□□□□ -0.13
SS18-218ENST00000581021 ZNF345Q14585 488 aa14.25□□□□□ -0.13
SS18-218ENST00000581021 LYRM9A8MSI8 78 aa14.24□□□□□ -0.13
SS18-218ENST00000581021 CSN1S1P47710 185 aa14.24□□□□□ -0.13
SS18-218ENST00000581021 DAD1P61803 113 aa14.24□□□□□ -0.13
SS18-218ENST00000581021 ST6GAL2Q96JF0 529 aa14.24□□□□□ -0.13
SS18-218ENST00000581021 ACTR3CQ9C0K3 210 aaPredicted RBP14.24□□□□□ -0.13
SS18-218ENST00000581021 RPH3ALQ9UNE2 315 aa14.24□□□□□ -0.13
SS18-218ENST00000581021 HMSDA8MTL9 139 aa14.23□□□□□ -0.13
SS18-218ENST00000581021 NMBP08949 121 aa14.23□□□□□ -0.13
SS18-218ENST00000581021 DEFB130BP0DP73 79 aa14.23□□□□□ -0.13
SS18-218ENST00000581021 DEFB130AP0DP74 79 aa14.23□□□□□ -0.13
SS18-218ENST00000581021 HTN3P15516 51 aa14.23□□□□□ -0.13
SS18-218ENST00000581021 Q6ZNX1 250 aa14.23□□□□□ -0.13
SS18-218ENST00000581021 ZNF493Q6ZR52 646 aa14.23□□□□□ -0.13
SS18-218ENST00000581021 NOP10Q9NPE3 64 aaKnown RBP14.23□□□□□ -0.13
SS18-218ENST00000581021 TRAV8-1A0A0A6YYK1 113 aa14.22□□□□□ -0.13
SS18-218ENST00000581021 GGTLC3B5MD39 225 aa14.22□□□□□ -0.13
SS18-218ENST00000581021 GPX1P07203 203 aa14.22□□□□□ -0.13
SS18-218ENST00000581021 TCTAP57738 103 aa14.22□□□□□ -0.13
SS18-218ENST00000581021 LGALS9CQ6DKI2 356 aa14.22□□□□□ -0.13
SS18-218ENST00000581021 GOLT1AQ6ZVE7 132 aa14.22□□□□□ -0.13
SS18-218ENST00000581021 RXFP4Q8TDU9 374 aa14.22□□□□□ -0.13
SS18-218ENST00000581021 ARPC5LQ9BPX5 153 aa14.22□□□□□ -0.13
SS18-218ENST00000581021 PYGO2Q9BRQ0 406 aa14.22□□□□□ -0.13
SS18-218ENST00000581021 DNAH6Q9C0G6 4158 aa14.21□□□□□ -0.13
SS18-218ENST00000581021 CXorf1O96002 111 aa14.21□□□□□ -0.13
SS18-218ENST00000581021 C11orf72Q8NBR9 251 aa14.21□□□□□ -0.13
SS18-218ENST00000581021 TVP23CQ96ET8 276 aa14.21□□□□□ -0.13
SS18-218ENST00000581021 TMPRSS5Q9H3S3 457 aa14.21□□□□□ -0.13
SS18-218ENST00000581021 TIMM8BQ9Y5J9 83 aaPredicted RBP14.21□□□□□ -0.13
SS18-218ENST00000581021 TRBV7-9A0A0J9YWB2 115 aa14.2□□□□□ -0.14
SS18-218ENST00000581021 CTXND1A0A1B0GTU2 59 aa14.2□□□□□ -0.14
SS18-218ENST00000581021 LINC00612Q8N6U2 182 aa14.2□□□□□ -0.14
SS18-218ENST00000581021 CMTM2Q8TAZ6 248 aa14.2□□□□□ -0.14
SS18-218ENST00000581021 LINC00467Q9BRT7 94 aa14.2□□□□□ -0.14
SS18-218ENST00000581021 TP53TG3Q9ULZ0 132 aa14.2□□□□□ -0.14
SS18-218ENST00000581021 BCL2L11O43521 198 aa14.19□□□□□ -0.14
SS18-218ENST00000581021 FHITP49789 147 aa14.19□□□□□ -0.14
SS18-218ENST00000581021 FGF8P55075 233 aaPredicted RBP14.19□□□□□ -0.14
SS18-218ENST00000581021 AKR1C8PQ5T2L2 129 aa14.19□□□□□ -0.14
SS18-218ENST00000581021 CCDC28AQ8IWP9 274 aa14.19□□□□□ -0.14
SS18-218ENST00000581021 FAM74A1Q5RGS3 127 aa14.18□□□□□ -0.14
SS18-218ENST00000581021 TMEM88Q6PEY1 159 aa14.18□□□□□ -0.14
SS18-218ENST00000581021 IQCF2Q8IXL9 164 aa14.18□□□□□ -0.14
SS18-218ENST00000581021 ARL6IP6Q8N6S5 226 aa14.18□□□□□ -0.14
SS18-218ENST00000581021 TMED6Q8WW62 240 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms