RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 ERCC8Q13216 396 aa14.01□□□□□ -0.17
COMMD4-213ENST00000565834 BTN1A1Q13410 526 aa14.01□□□□□ -0.17
COMMD4-213ENST00000565834 C9orf66Q5T8R8 295 aa14.01□□□□□ -0.17
COMMD4-213ENST00000565834 NHLRC2Q8NBF2 726 aa14.01□□□□□ -0.17
COMMD4-213ENST00000565834 OR10J6PQ8NGY7 276 aa14.01□□□□□ -0.17
COMMD4-213ENST00000565834 SPATA3Q8NHX4 192 aa14.01□□□□□ -0.17
COMMD4-213ENST00000565834 IGLV2-8P01709 118 aa14.01□□□□□ -0.17
COMMD4-213ENST00000565834 DEFB1P60022 68 aa14.01□□□□□ -0.17
COMMD4-213ENST00000565834 TMEM78Q5T7P6 136 aa14.01□□□□□ -0.17
COMMD4-213ENST00000565834 C9orf47Q6ZRZ4 202 aa14.01□□□□□ -0.17
COMMD4-213ENST00000565834 OR8A1Q8NGG7 326 aa14.01□□□□□ -0.17
COMMD4-213ENST00000565834 SMIM12Q96EX1 92 aa14.01□□□□□ -0.17
COMMD4-213ENST00000565834 ZFP30Q9Y2G7 519 aa14.01□□□□□ -0.17
COMMD4-213ENST00000565834 ZNF256Q9Y2P7 627 aaPredicted RBP14.01□□□□□ -0.17
COMMD4-213ENST00000565834 F6UB75 175 aa14□□□□□ -0.17
COMMD4-213ENST00000565834 ZNF705DP0CH99 300 aaPredicted RBP14□□□□□ -0.17
COMMD4-213ENST00000565834 ZNF705BP0CI00 300 aaPredicted RBP14□□□□□ -0.17
COMMD4-213ENST00000565834 MGST1P10620 155 aaKnown RBP14□□□□□ -0.17
COMMD4-213ENST00000565834 ATRAIDQ6UW56 229 aa14□□□□□ -0.17
COMMD4-213ENST00000565834 Q8TAT8 98 aa14□□□□□ -0.17
COMMD4-213ENST00000565834 MCRIP2Q9BUT9 160 aaKnown RBP14□□□□□ -0.17
COMMD4-213ENST00000565834 NOTCH3Q9UM47 2321 aa13.99□□□□□ -0.17
COMMD4-213ENST00000565834 K7EN84 100 aa13.99□□□□□ -0.17
COMMD4-213ENST00000565834 HIST1H1AQ02539 215 aaPredicted RBP13.99□□□□□ -0.17
COMMD4-213ENST00000565834 RHEBQ15382 184 aa13.99□□□□□ -0.17
COMMD4-213ENST00000565834 WFDC9Q8NEX5 89 aa13.99□□□□□ -0.17
COMMD4-213ENST00000565834 AGPAT4-IT1Q9H0P7 198 aa13.99□□□□□ -0.17
COMMD4-213ENST00000565834 C7orf77A4D0Y5 90 aa13.98□□□□□ -0.17
COMMD4-213ENST00000565834 B4DEV8 164 aa13.98□□□□□ -0.17
COMMD4-213ENST00000565834 NPIPB6E9PJ23 425 aa13.98□□□□□ -0.17
COMMD4-213ENST00000565834 DEFB131AP59861 70 aa13.98□□□□□ -0.17
COMMD4-213ENST00000565834 SAPCD1Q5SSQ6 148 aa13.98□□□□□ -0.17
COMMD4-213ENST00000565834 TMEM183AQ8IXX5 376 aa13.98□□□□□ -0.17
COMMD4-213ENST00000565834 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.98□□□□□ -0.17
COMMD4-213ENST00000565834 ISOC2Q96AB3 205 aa13.98□□□□□ -0.17
COMMD4-213ENST00000565834 ASCL2Q99929 193 aa13.98□□□□□ -0.17
COMMD4-213ENST00000565834 NDFIP1Q9BT67 221 aa13.98□□□□□ -0.17
COMMD4-213ENST00000565834 MLST8Q9BVC4 326 aa13.98□□□□□ -0.17
COMMD4-213ENST00000565834 LOC105371267A0A1B0GV96 52 aa13.98□□□□□ -0.17
COMMD4-213ENST00000565834 ZNF138P52744 262 aa13.98□□□□□ -0.17
COMMD4-213ENST00000565834 OR5I1Q13606 314 aa13.98□□□□□ -0.17
COMMD4-213ENST00000565834 EBLN2Q6P2I7 272 aa13.98□□□□□ -0.17
COMMD4-213ENST00000565834 LINC00477Q96M19 166 aa13.98□□□□□ -0.17
COMMD4-213ENST00000565834 PRR25Q96S07 402 aa13.98□□□□□ -0.17
COMMD4-213ENST00000565834 MAP6D1Q9H9H5 199 aa13.98□□□□□ -0.17
COMMD4-213ENST00000565834 RPS10P5Q9NQ39 176 aa13.98□□□□□ -0.17
COMMD4-213ENST00000565834 GCGP01275 180 aa13.97□□□□□ -0.17
COMMD4-213ENST00000565834 FOXI2Q6ZQN5 318 aa13.97□□□□□ -0.17
COMMD4-213ENST00000565834 GPR61Q9BZJ8 451 aa13.97□□□□□ -0.17
COMMD4-213ENST00000565834 ZNF492Q9P255 531 aa13.97□□□□□ -0.17
COMMD4-213ENST00000565834 A0A0J9YX75 114 aa13.96□□□□□ -0.17
COMMD4-213ENST00000565834 BIN3Q9NQY0 253 aa13.96□□□□□ -0.17
COMMD4-213ENST00000565834 PPP1R14DQ9NXH3 145 aa13.96□□□□□ -0.17
COMMD4-213ENST00000565834 GDF5OSQ5U4N7 250 aa13.95□□□□□ -0.18
COMMD4-213ENST00000565834 PRR27Q6MZM9 219 aa13.95□□□□□ -0.18
COMMD4-213ENST00000565834 C8orf49Q96NF6 230 aa13.95□□□□□ -0.18
COMMD4-213ENST00000565834 SAV1Q9H4B6 383 aaPredicted RBP13.95□□□□□ -0.18
COMMD4-213ENST00000565834 AGRNO00468 2067 aa13.95□□□□□ -0.18
COMMD4-213ENST00000565834 TRRAPQ9Y4A5 3859 aa13.95□□□□□ -0.18
COMMD4-213ENST00000565834 MT-ND4LP03901 98 aa13.95□□□□□ -0.18
COMMD4-213ENST00000565834 ODF3L2Q3SX64 289 aa13.95□□□□□ -0.18
COMMD4-213ENST00000565834 RNF212Q495C1 297 aa13.95□□□□□ -0.18
COMMD4-213ENST00000565834 ZC2HC1AQ96GY0 325 aa13.95□□□□□ -0.18
COMMD4-213ENST00000565834 SFRP2Q96HF1 295 aa13.95□□□□□ -0.18
COMMD4-213ENST00000565834 DUSP14O95147 198 aaKnown RBP13.94□□□□□ -0.18
COMMD4-213ENST00000565834 CT45A10P0DMU9 189 aa13.94□□□□□ -0.18
COMMD4-213ENST00000565834 CMC4P56277 68 aaPredicted RBP13.94□□□□□ -0.18
COMMD4-213ENST00000565834 BEAN1Q3B7T3 259 aa13.94□□□□□ -0.18
COMMD4-213ENST00000565834 LENEPQ9Y5L5 61 aa13.94□□□□□ -0.18
COMMD4-213ENST00000565834 A0A087WWC5 75 aa13.93□□□□□ -0.18
COMMD4-213ENST00000565834 OR11H12B2RN74 326 aa13.93□□□□□ -0.18
COMMD4-213ENST00000565834 IGLL1P15814 213 aa13.93□□□□□ -0.18
COMMD4-213ENST00000565834 ERVFC1-1P60608 527 aa13.93□□□□□ -0.18
COMMD4-213ENST00000565834 COX8CQ7Z4L0 72 aa13.93□□□□□ -0.18
COMMD4-213ENST00000565834 MDFIQ99750 246 aa13.93□□□□□ -0.18
COMMD4-213ENST00000565834 KNCNA6PVL3 124 aa13.92□□□□□ -0.18
COMMD4-213ENST00000565834 SMUG1Q53HV7 270 aa13.92□□□□□ -0.18
COMMD4-213ENST00000565834 ACTL10Q5JWF8 245 aa13.92□□□□□ -0.18
COMMD4-213ENST00000565834 C15orf54Q8N8G6 183 aa13.92□□□□□ -0.18
COMMD4-213ENST00000565834 ANAPC16Q96DE5 110 aa13.92□□□□□ -0.18
COMMD4-213ENST00000565834 RNASE7Q9H1E1 156 aaKnown RBP13.92□□□□□ -0.18
COMMD4-213ENST00000565834 HLA-DRB4P13762 266 aa13.91□□□□□ -0.18
COMMD4-213ENST00000565834 ZNF124Q15973 351 aa13.91□□□□□ -0.18
COMMD4-213ENST00000565834 IBA57Q5T440 356 aaKnown RBP13.91□□□□□ -0.18
COMMD4-213ENST00000565834 APRG1Q8IVJ8 170 aa13.91□□□□□ -0.18
COMMD4-213ENST00000565834 OR4B1Q8NGF8 309 aa13.91□□□□□ -0.18
COMMD4-213ENST00000565834 OR10G8Q8NGN5 311 aa13.91□□□□□ -0.18
COMMD4-213ENST00000565834 CTDSP1Q9GZU7 261 aa13.91□□□□□ -0.18
COMMD4-213ENST00000565834 OSTCQ9NRP0 149 aa13.91□□□□□ -0.18
COMMD4-213ENST00000565834 HLA-DRB4X5D2U9 266 aa13.91□□□□□ -0.18
COMMD4-213ENST00000565834 TRBV7-9A0A0J9YWB2 115 aa13.91□□□□□ -0.18
COMMD4-213ENST00000565834 PPP1R2P9O14990 202 aa13.91□□□□□ -0.18
COMMD4-213ENST00000565834 FAM231DQ6ZW35 169 aa13.91□□□□□ -0.18
COMMD4-213ENST00000565834 FAM110AQ9BQ89 295 aa13.91□□□□□ -0.18
COMMD4-213ENST00000565834 H7BYZ3 331 aa13.9□□□□□ -0.18
COMMD4-213ENST00000565834 WIPF1O43516 503 aa13.9□□□□□ -0.18
COMMD4-213ENST00000565834 IGKV3-20P01619 116 aa13.9□□□□□ -0.18
COMMD4-213ENST00000565834 CD7P09564 240 aa13.9□□□□□ -0.18
COMMD4-213ENST00000565834 LINC00322Q6ZN03 302 aaPredicted RBP13.9□□□□□ -0.18
COMMD4-213ENST00000565834 DAZAP1Q96EP5 407 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms