RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 HOXA5P20719 270 aa9.46□□□□□ -0.9
SNRPA1-204ENST00000558020 RNASE4P34096 147 aaKnown RBP9.46□□□□□ -0.9
SNRPA1-204ENST00000558020 IL15RAQ13261 267 aa9.46□□□□□ -0.9
SNRPA1-204ENST00000558020 TMEM78Q5T7P6 136 aa9.46□□□□□ -0.9
SNRPA1-204ENST00000558020 LINC00299Q6ZSB3 139 aa9.46□□□□□ -0.9
SNRPA1-204ENST00000558020 EIF4E3Q8N5X7 224 aaKnown RBP9.46□□□□□ -0.9
SNRPA1-204ENST00000558020 BLNKQ8WV28 456 aa9.46□□□□□ -0.9
SNRPA1-204ENST00000558020 LINC00467Q9BRT7 94 aa9.46□□□□□ -0.9
SNRPA1-204ENST00000558020 UPK3BQ9BT76 320 aa9.46□□□□□ -0.9
SNRPA1-204ENST00000558020 KCNIP2Q9NS61 270 aa9.46□□□□□ -0.9
SNRPA1-204ENST00000558020 KLLNB2CW77 178 aa9.45□□□□□ -0.9
SNRPA1-204ENST00000558020 M0R3E3 92 aa9.45□□□□□ -0.9
SNRPA1-204ENST00000558020 ERCC8Q13216 396 aa9.45□□□□□ -0.9
SNRPA1-204ENST00000558020 ESRGQ1W209 222 aa9.45□□□□□ -0.9
SNRPA1-204ENST00000558020 ANXA2RQ3ZCQ2 193 aa9.45□□□□□ -0.9
SNRPA1-204ENST00000558020 C9orf47Q6ZRZ4 202 aa9.45□□□□□ -0.9
SNRPA1-204ENST00000558020 Q6ZTI0 123 aa9.45□□□□□ -0.9
SNRPA1-204ENST00000558020 C18orf15Q96N68 181 aa9.45□□□□□ -0.9
SNRPA1-204ENST00000558020 NPCDR1Q9BY65 106 aa9.45□□□□□ -0.9
SNRPA1-204ENST00000558020 AGPAT4-IT1Q9H0P7 198 aa9.45□□□□□ -0.9
SNRPA1-204ENST00000558020 Q9H3A6 140 aa9.45□□□□□ -0.9
SNRPA1-204ENST00000558020 TMPRSS5Q9H3S3 457 aa9.45□□□□□ -0.9
SNRPA1-204ENST00000558020 BATF3Q9NR55 127 aa9.45□□□□□ -0.9
SNRPA1-204ENST00000558020 GSN-AS1Q9NRJ2 163 aa9.45□□□□□ -0.9
SNRPA1-204ENST00000558020 TRGV1A0A0A0MS02 117 aa9.44□□□□□ -0.9
SNRPA1-204ENST00000558020 E5RGE8 158 aa9.44□□□□□ -0.9
SNRPA1-204ENST00000558020 RGS13O14921 159 aa9.44□□□□□ -0.9
SNRPA1-204ENST00000558020 ZNF324O75467 553 aaPredicted RBP9.44□□□□□ -0.9
SNRPA1-204ENST00000558020 CDK2AP2O75956 126 aa9.44□□□□□ -0.9
SNRPA1-204ENST00000558020 NDUFB4O95168 129 aa9.44□□□□□ -0.9
SNRPA1-204ENST00000558020 NBEAP1P0C6P0 100 aa9.44□□□□□ -0.9
SNRPA1-204ENST00000558020 CYCSP99999 105 aaKnown RBP9.44□□□□□ -0.9
SNRPA1-204ENST00000558020 ICAM4Q14773 271 aa9.44□□□□□ -0.9
SNRPA1-204ENST00000558020 EXOC3-AS1Q8N2X6 119 aa9.44□□□□□ -0.9
SNRPA1-204ENST00000558020 S100ZQ8WXG8 99 aa9.44□□□□□ -0.9
SNRPA1-204ENST00000558020 FUT9Q9Y231 359 aa9.44□□□□□ -0.9
SNRPA1-204ENST00000558020 MRPS16Q9Y3D3 137 aaKnown RBP9.44□□□□□ -0.9
SNRPA1-204ENST00000558020 A6NHS1 94 aa9.43□□□□□ -0.9
SNRPA1-204ENST00000558020 PYYP10082 97 aa9.43□□□□□ -0.9
SNRPA1-204ENST00000558020 CRISP2P16562 243 aa9.43□□□□□ -0.9
SNRPA1-204ENST00000558020 CSN1S1P47710 185 aa9.43□□□□□ -0.9
SNRPA1-204ENST00000558020 NHLH2Q02577 135 aa9.43□□□□□ -0.9
SNRPA1-204ENST00000558020 CD300CQ08708 224 aa9.43□□□□□ -0.9
SNRPA1-204ENST00000558020 SLAQ13239 276 aa9.43□□□□□ -0.9
SNRPA1-204ENST00000558020 OR5C1Q8NGR4 320 aa9.43□□□□□ -0.9
SNRPA1-204ENST00000558020 FAM19A4Q96LR4 140 aa9.43□□□□□ -0.9
SNRPA1-204ENST00000558020 OR51M1Q9H341 326 aa9.43□□□□□ -0.9
SNRPA1-204ENST00000558020 C17orf112F2Z3M2 114 aa9.42□□□□□ -0.9
SNRPA1-204ENST00000558020 BTN1A1Q13410 526 aa9.42□□□□□ -0.9
SNRPA1-204ENST00000558020 ASAH1Q13510 395 aa9.42□□□□□ -0.9
SNRPA1-204ENST00000558020 IBA57Q5T440 356 aaKnown RBP9.42□□□□□ -0.9
SNRPA1-204ENST00000558020 FAM122CQ6P4D5 195 aa9.42□□□□□ -0.9
SNRPA1-204ENST00000558020 C11orf72Q8NBR9 251 aa9.42□□□□□ -0.9
SNRPA1-204ENST00000558020 THAP6Q8TBB0 222 aa9.42□□□□□ -0.9
SNRPA1-204ENST00000558020 ENKURQ8TC29 256 aa9.42□□□□□ -0.9
SNRPA1-204ENST00000558020 ARPC5LQ9BPX5 153 aa9.42□□□□□ -0.9
SNRPA1-204ENST00000558020 MRPL32Q9BYC8 188 aaKnown RBP9.42□□□□□ -0.9
SNRPA1-204ENST00000558020 NMES1Q9C002 83 aa9.42□□□□□ -0.9
SNRPA1-204ENST00000558020 TRBV7-9A0A0J9YWB2 115 aa9.41□□□□□ -0.9
SNRPA1-204ENST00000558020 PAX4O43316 350 aa9.41□□□□□ -0.9
SNRPA1-204ENST00000558020 SPINK4O60575 86 aa9.41□□□□□ -0.9
SNRPA1-204ENST00000558020 ZNF138P52744 262 aa9.41□□□□□ -0.9
SNRPA1-204ENST00000558020 TCL1AP56279 114 aa9.41□□□□□ -0.9
SNRPA1-204ENST00000558020 GCSAMLQ5JQS6 135 aa9.41□□□□□ -0.9
SNRPA1-204ENST00000558020 PAXXQ9BUH6 204 aa9.41□□□□□ -0.9
SNRPA1-204ENST00000558020 SLC25A2Q9BXI2 301 aa9.41□□□□□ -0.9
SNRPA1-204ENST00000558020 PTTG2Q9NZH5 202 aa9.41□□□□□ -0.9
SNRPA1-204ENST00000558020 ZNF492Q9P255 531 aa9.41□□□□□ -0.9
SNRPA1-204ENST00000558020 DNAH11Q96DT5 4516 aa9.41□□□□□ -0.9
SNRPA1-204ENST00000558020 IGHV1OR15-1A0A075B7D0 117 aa9.4□□□□□ -0.9
SNRPA1-204ENST00000558020 A0A096LPF7 62 aa9.4□□□□□ -0.9
SNRPA1-204ENST00000558020 MIR17HGQ75NE6 70 aa9.4□□□□□ -0.9
SNRPA1-204ENST00000558020 SPATA12Q7Z6I5 190 aa9.4□□□□□ -0.9
SNRPA1-204ENST00000558020 LYPD1Q8N2G4 141 aa9.4□□□□□ -0.9
SNRPA1-204ENST00000558020 VSIG2Q96IQ7 327 aa9.4□□□□□ -0.9
SNRPA1-204ENST00000558020 ST6GAL2Q96JF0 529 aa9.4□□□□□ -0.9
SNRPA1-204ENST00000558020 FAM167A-AS1Q96KT0 104 aa9.4□□□□□ -0.9
SNRPA1-204ENST00000558020 VGLL1Q99990 258 aa9.4□□□□□ -0.9
SNRPA1-204ENST00000558020 PRO0255Q9UI72 69 aa9.4□□□□□ -0.9
SNRPA1-204ENST00000558020 KLF12Q9Y4X4 402 aa9.4□□□□□ -0.9
SNRPA1-204ENST00000558020 ICOSQ9Y6W8 199 aa9.4□□□□□ -0.9
SNRPA1-204ENST00000558020 IGKV2-40A0A087WW87 121 aaPredicted RBP9.39□□□□□ -0.91
SNRPA1-204ENST00000558020 SIVA1O15304 175 aa9.39□□□□□ -0.91
SNRPA1-204ENST00000558020 OR7C2O60412 319 aa9.39□□□□□ -0.91
SNRPA1-204ENST00000558020 PRAF2O60831 178 aa9.39□□□□□ -0.91
SNRPA1-204ENST00000558020 IGKV2D-40P01614 121 aaPredicted RBP9.39□□□□□ -0.91
SNRPA1-204ENST00000558020 OR10J4P0C629 311 aa9.39□□□□□ -0.91
SNRPA1-204ENST00000558020 LRRC37A5PQ49AS3 106 aa9.39□□□□□ -0.91
SNRPA1-204ENST00000558020 ZFAND2AQ8N6M9 145 aa9.39□□□□□ -0.91
SNRPA1-204ENST00000558020 WDR61Q9GZS3 305 aaKnown RBP9.39□□□□□ -0.91
SNRPA1-204ENST00000558020 HHLA3Q9XRX5 114 aa9.39□□□□□ -0.91
SNRPA1-204ENST00000558020 DYNC1H1Q14204 4646 aaKnown RBP9.38□□□□□ -0.91
SNRPA1-204ENST00000558020 TRAV9-2A0A087WT02 112 aa9.38□□□□□ -0.91
SNRPA1-204ENST00000558020 RBAKDNA6NC62 111 aa9.38□□□□□ -0.91
SNRPA1-204ENST00000558020 EREGO14944 169 aa9.38□□□□□ -0.91
SNRPA1-204ENST00000558020 SIX6O95475 246 aa9.38□□□□□ -0.91
SNRPA1-204ENST00000558020 PET100P0DJ07 73 aa9.38□□□□□ -0.91
SNRPA1-204ENST00000558020 RANP62826 216 aaKnown RBP9.38□□□□□ -0.91
SNRPA1-204ENST00000558020 ZNF415Q09FC8 603 aa9.38□□□□□ -0.91
SNRPA1-204ENST00000558020 MRPL23Q16540 153 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms