RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 DHFRP00374 187 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 HPRT1P00492 218 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 HRASP01112 189 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 IFNA21P01568 189 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 IFNA17P01571 189 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 IGKV1-5P01602 117 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 CD74P04233 296 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 SERPINE2P07093 398 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 MIFP14174 115 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 HTN1P15515 57 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 NQO2P16083 231 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 GALP22466 123 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 DTYMKP23919 212 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 MYL9P24844 172 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 GNRHRP30968 328 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 HRH1P35367 487 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 OPRK1P41145 380 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 ETV6P41212 452 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 RND2P52198 227 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 TAS2R31P59538 309 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 LSM3P62310 102 aaKnown RBP1.55□□□□□ -2.16
SCFD1-219ENST00000556413 MEF2BQ02080 365 aaPredicted RBP1.55□□□□□ -2.16
SCFD1-219ENST00000556413 TPBGQ13641 420 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 USF2Q15853 346 aaPredicted RBP1.55□□□□□ -2.16
SCFD1-219ENST00000556413 SPINK13Q1W4C9 94 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 CNIH2Q6PI25 160 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 ZNF546Q86UE3 836 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 SNX29P2Q8IUI4 249 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 CDH26Q8IXH8 852 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 C10orf67Q8IYJ2 551 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 C1orf158Q8N1D5 194 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 MS4A15Q8N5U1 240 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 SLC35G3Q8N808 338 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 C15orf56Q8N910 161 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 VSTM2AQ8TAG5 236 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 DCANP1Q8TF63 244 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 TMEM230Q96A57 120 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 GPR146Q96CH1 333 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 ACY3Q96HD9 319 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 MYCBPQ99417 103 aaPredicted RBP1.55□□□□□ -2.16
SCFD1-219ENST00000556413 MGLLQ99685 303 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 HSD17B10Q99714 261 aaKnown RBP1.55□□□□□ -2.16
SCFD1-219ENST00000556413 C7orf50Q9BRJ6 194 aaKnown RBP1.55□□□□□ -2.16
SCFD1-219ENST00000556413 NXF2Q9GZY0 626 aaKnown RBP1.55□□□□□ -2.16
SCFD1-219ENST00000556413 DCSTAMPQ9H295 470 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 VSIRQ9H7M9 311 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 AUNIPQ9H7T9 357 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 IFT46Q9NQC8 304 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 RHBDL2Q9NX52 303 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 ZNF586Q9NXT0 402 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 LINC00588Q9Y4M8 146 aa1.55□□□□□ -2.16
SCFD1-219ENST00000556413 METTL21EPA6NDL7 271 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 H3BMM0 161 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 K7EMT4 169 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 PDCD5O14737 125 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 CASQ2O14958 399 aaPredicted RBP1.54□□□□□ -2.16
SCFD1-219ENST00000556413 ARL6IP5O75915 188 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 SNAPC5O75971 98 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 TMEM50AO95807 157 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 IGHV3-53P01767 116 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 IL4P05112 153 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 IAPPP10997 89 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 SDC2P34741 201 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 RPL13AP40429 203 aaKnown RBP1.54□□□□□ -2.16
SCFD1-219ENST00000556413 RORCP51449 518 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 AKR1C2P52895 323 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 TAS2R20P59543 309 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 DAD1P61803 113 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 ZNF90Q03938 601 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 FGL1Q08830 312 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 MLLT11Q13015 90 aaPredicted RBP1.54□□□□□ -2.16
SCFD1-219ENST00000556413 CATR1Q13166 79 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 OR5I1Q13606 314 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 NEDD8Q15843 81 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 LGALS9BQ3B8N2 356 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 OGFRL1Q5TC84 451 aaPredicted RBP1.54□□□□□ -2.16
SCFD1-219ENST00000556413 FAM78BQ5VT40 261 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 SFXN4Q6P4A7 337 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 IZUMO2Q6UXV1 221 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 SSX7Q7RTT5 188 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 H2BFWTQ7Z2G1 175 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 OR5H2Q8NGV7 314 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 OR2G3Q8NGZ4 309 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 OR1P1Q8NH06 330 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 ZNRF2Q8NHG8 242 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 COQ8AQ8NI60 647 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 RNASE11Q8TAA1 199 aaKnown RBP1.54□□□□□ -2.16
SCFD1-219ENST00000556413 LHFPL5Q8TAF8 219 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 DGCR14Q96DF8 476 aaKnown RBP1.54□□□□□ -2.16
SCFD1-219ENST00000556413 OR10C1Q96KK4 312 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 C18orf15Q96N68 181 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 METTL26Q96S19 204 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 TP53RKQ96S44 253 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 GINS3Q9BRX5 216 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 TMEM208Q9BTX3 173 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 ACOT13Q9NPJ3 140 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 TXNL4BQ9NX01 149 aaKnown RBP1.54□□□□□ -2.16
SCFD1-219ENST00000556413 NDUFB11Q9NX14 153 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 COMMD9Q9P000 198 aa1.54□□□□□ -2.16
SCFD1-219ENST00000556413 DOK5Q9P104 306 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms