RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 PSG3Q16557 428 aa9.73□□□□□ -0.85
HDAC7-230ENST00000552960 PIP4P2Q8N4L2 257 aa9.73□□□□□ -0.85
HDAC7-230ENST00000552960 RPEQ96AT9 228 aa9.73□□□□□ -0.85
HDAC7-230ENST00000552960 IFI27L1Q96BM0 104 aa9.73□□□□□ -0.85
HDAC7-230ENST00000552960 ABCA12Q86UK0 2595 aa9.73□□□□□ -0.85
HDAC7-230ENST00000552960 NPIPB5A8MRT5 1133 aa9.73□□□□□ -0.85
HDAC7-230ENST00000552960 AAMDCQ9H7C9 122 aa9.73□□□□□ -0.85
HDAC7-230ENST00000552960 PRSS1P07477 247 aa9.72□□□□□ -0.85
HDAC7-230ENST00000552960 FGF6P10767 208 aa9.72□□□□□ -0.85
HDAC7-230ENST00000552960 CREBBPQ92793 2442 aa9.72□□□□□ -0.85
HDAC7-230ENST00000552960 H3BRM9 83 aa9.72□□□□□ -0.85
HDAC7-230ENST00000552960 HBDP02042 147 aa9.72□□□□□ -0.85
HDAC7-230ENST00000552960 PPIFP30405 207 aaKnown RBP9.72□□□□□ -0.85
HDAC7-230ENST00000552960 MRPL51Q4U2R6 128 aaKnown RBP9.72□□□□□ -0.85
HDAC7-230ENST00000552960 MTURNQ8N3F0 131 aa9.72□□□□□ -0.85
HDAC7-230ENST00000552960 RNASE6Q93091 150 aaKnown RBP9.72□□□□□ -0.85
HDAC7-230ENST00000552960 ZNF462Q96JM2 2506 aa9.72□□□□□ -0.85
HDAC7-230ENST00000552960 IGHV1-3A0A0C4DH29 117 aa9.71□□□□□ -0.85
HDAC7-230ENST00000552960 NPYP01303 97 aa9.71□□□□□ -0.85
HDAC7-230ENST00000552960 SIGLEC15Q6ZMC9 328 aa9.71□□□□□ -0.85
HDAC7-230ENST00000552960 TMEM75Q8N9X5 138 aa9.71□□□□□ -0.85
HDAC7-230ENST00000552960 RNF125Q96EQ8 232 aa9.71□□□□□ -0.85
HDAC7-230ENST00000552960 SETD2Q9BYW2 2564 aaPredicted RBP9.71□□□□□ -0.85
HDAC7-230ENST00000552960 TEX48A0A1B0GUV7 120 aa9.71□□□□□ -0.86
HDAC7-230ENST00000552960 VSTM5A8MXK1 200 aa9.71□□□□□ -0.86
HDAC7-230ENST00000552960 TEX22C9J3V5 150 aa9.71□□□□□ -0.86
HDAC7-230ENST00000552960 ORM1P02763 201 aa9.71□□□□□ -0.86
HDAC7-230ENST00000552960 EVI2AP22794 236 aa9.71□□□□□ -0.86
HDAC7-230ENST00000552960 HES1Q14469 280 aa9.71□□□□□ -0.86
HDAC7-230ENST00000552960 FAM104BQ5XKR9 115 aa9.71□□□□□ -0.86
HDAC7-230ENST00000552960 MSRB1Q9NZV6 116 aa9.71□□□□□ -0.86
HDAC7-230ENST00000552960 K7EP34 96 aa9.71□□□□□ -0.86
HDAC7-230ENST00000552960 SH2D1AO60880 128 aa9.71□□□□□ -0.86
HDAC7-230ENST00000552960 HSD52Q0P140 79 aa9.71□□□□□ -0.86
HDAC7-230ENST00000552960 BOD1L2Q8IYS8 172 aa9.71□□□□□ -0.86
HDAC7-230ENST00000552960 PPIAL4CA0A0B4J2A2 164 aa9.7□□□□□ -0.86
HDAC7-230ENST00000552960 K7ERJ3 54 aa9.7□□□□□ -0.86
HDAC7-230ENST00000552960 PPIAL4GP0DN37 164 aa9.7□□□□□ -0.86
HDAC7-230ENST00000552960 APOBEC3AP31941 199 aaPredicted RBP9.7□□□□□ -0.86
HDAC7-230ENST00000552960 TMEM155Q4W5P6 130 aa9.7□□□□□ -0.86
HDAC7-230ENST00000552960 SHANK2-AS3Q9BTD1 123 aa9.7□□□□□ -0.86
HDAC7-230ENST00000552960 FABP2P12104 132 aa9.7□□□□□ -0.86
HDAC7-230ENST00000552960 AZU1P20160 251 aa9.7□□□□□ -0.86
HDAC7-230ENST00000552960 WFDC12Q8WWY7 111 aa9.7□□□□□ -0.86
HDAC7-230ENST00000552960 A0A1W2PPR1 153 aa9.69□□□□□ -0.86
HDAC7-230ENST00000552960 I3L2K1 104 aa9.69□□□□□ -0.86
HDAC7-230ENST00000552960 OVOL3O00110 214 aa9.69□□□□□ -0.86
HDAC7-230ENST00000552960 LGALS9BQ3B8N2 356 aa9.69□□□□□ -0.86
HDAC7-230ENST00000552960 LGALS9CQ6DKI2 356 aa9.69□□□□□ -0.86
HDAC7-230ENST00000552960 UFSP1Q6NVU6 142 aa9.69□□□□□ -0.86
HDAC7-230ENST00000552960 LINC00311Q8N616 119 aa9.69□□□□□ -0.86
HDAC7-230ENST00000552960 CLUHP3Q96NS8 147 aa9.69□□□□□ -0.86
HDAC7-230ENST00000552960 TMEM14CQ9P0S9 112 aa9.69□□□□□ -0.86
HDAC7-230ENST00000552960 CD3EP07766 207 aa9.69□□□□□ -0.86
HDAC7-230ENST00000552960 GNLYP22749 145 aa9.69□□□□□ -0.86
HDAC7-230ENST00000552960 ZNF491Q8N8L2 437 aa9.69□□□□□ -0.86
HDAC7-230ENST00000552960 NDUFS7O75251 213 aa9.69□□□□□ -0.86
HDAC7-230ENST00000552960 GAS8-AS1O95177 125 aa9.69□□□□□ -0.86
HDAC7-230ENST00000552960 FCER1GP30273 86 aa9.69□□□□□ -0.86
HDAC7-230ENST00000552960 SAMD5Q5TGI4 173 aa9.69□□□□□ -0.86
HDAC7-230ENST00000552960 NPFFR1Q9GZQ6 430 aa9.69□□□□□ -0.86
HDAC7-230ENST00000552960 AGRNO00468 2067 aa9.68□□□□□ -0.86
HDAC7-230ENST00000552960 DOPEY2Q9Y3R5 2298 aa9.68□□□□□ -0.86
HDAC7-230ENST00000552960 A0A1W2PPM0 123 aa9.68□□□□□ -0.86
HDAC7-230ENST00000552960 HLA-DMBP28068 263 aa9.68□□□□□ -0.86
HDAC7-230ENST00000552960 ONECUT1Q9UBC0 465 aa9.68□□□□□ -0.86
HDAC7-230ENST00000552960 SMIM13P0DJ93 91 aa9.68□□□□□ -0.86
HDAC7-230ENST00000552960 GATA1P15976 413 aaPredicted RBP9.68□□□□□ -0.86
HDAC7-230ENST00000552960 LEPP41159 167 aa9.68□□□□□ -0.86
HDAC7-230ENST00000552960 FXYD2P54710 66 aa9.68□□□□□ -0.86
HDAC7-230ENST00000552960 GTSCR1Q86UQ5 136 aa9.68□□□□□ -0.86
HDAC7-230ENST00000552960 OR9G4Q8NGQ1 327 aa9.68□□□□□ -0.86
HDAC7-230ENST00000552960 NHP2Q9NX24 153 aaKnown RBP9.68□□□□□ -0.86
HDAC7-230ENST00000552960 CHTOPQ9Y3Y2 248 aaKnown RBP9.68□□□□□ -0.86
HDAC7-230ENST00000552960 IGKV2D-26A0A0A0MRZ7 120 aa9.67□□□□□ -0.86
HDAC7-230ENST00000552960 A0A1B0GW15 77 aa9.67□□□□□ -0.86
HDAC7-230ENST00000552960 K7EIM0 57 aa9.67□□□□□ -0.86
HDAC7-230ENST00000552960 EGR2P11161 476 aaPredicted RBP9.67□□□□□ -0.86
HDAC7-230ENST00000552960 Q6AWC8 147 aa9.67□□□□□ -0.86
HDAC7-230ENST00000552960 H3BRN7 92 aa9.67□□□□□ -0.86
HDAC7-230ENST00000552960 BUB1B-PAK6H3BSN5 160 aa9.67□□□□□ -0.86
HDAC7-230ENST00000552960 DLX6P56179 175 aa9.67□□□□□ -0.86
HDAC7-230ENST00000552960 ADAMTSL5Q6ZMM2 481 aa9.67□□□□□ -0.86
HDAC7-230ENST00000552960 OR4X2Q8NGF9 303 aa9.67□□□□□ -0.86
HDAC7-230ENST00000552960 NBPF19A0A087WUL8 3843 aa9.67□□□□□ -0.86
HDAC7-230ENST00000552960 C19orf84I3L1E1 186 aa9.67□□□□□ -0.86
HDAC7-230ENST00000552960 TIMM23O14925 209 aa9.67□□□□□ -0.86
HDAC7-230ENST00000552960 TMEM160Q9NX00 188 aa9.67□□□□□ -0.86
HDAC7-230ENST00000552960 C16orf54Q6UWD8 224 aa9.66□□□□□ -0.86
HDAC7-230ENST00000552960 FOXC2Q99958 501 aa9.66□□□□□ -0.86
HDAC7-230ENST00000552960 VGLL1Q99990 258 aa9.66□□□□□ -0.86
HDAC7-230ENST00000552960 TSSC4Q9Y5U2 329 aaPredicted RBP9.66□□□□□ -0.86
HDAC7-230ENST00000552960 SONP18583 2426 aaKnown RBP9.66□□□□□ -0.86
HDAC7-230ENST00000552960 IGHV3OR16-13A0A075B7E8 117 aa9.66□□□□□ -0.86
HDAC7-230ENST00000552960 IGHV3-74A0A0B4J1X5 117 aa9.66□□□□□ -0.86
HDAC7-230ENST00000552960 PRB1P04280 392 aa9.65□□□□□ -0.86
HDAC7-230ENST00000552960 CRYGBP07316 175 aa9.65□□□□□ -0.86
HDAC7-230ENST00000552960 ZNF80P51504 273 aaPredicted RBP9.65□□□□□ -0.86
HDAC7-230ENST00000552960 NCBP2LA6PVI3 153 aaKnown RBP9.65□□□□□ -0.86
HDAC7-230ENST00000552960 HOXB4P17483 251 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms