RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 LSM5Q9Y4Y9 91 aaKnown RBP1.96□□□□□ -2.1
SCFD1-207ENST00000544052 DNAH1Q9P2D7 4330 aa1.96□□□□□ -2.1
SCFD1-207ENST00000544052 TENM3Q9P273 2699 aa1.96□□□□□ -2.1
SCFD1-207ENST00000544052 TRAV38-1A0A0B4J264 116 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 FAM236DA0A1B0GTK5 79 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 A6NIN4 97 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 ODF3BA8MYP8 253 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 INMT-MINDY4F8WBC2 141 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 ZNF737O75373 536 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 TTRP02766 147 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 OR13C7P0DN81 318 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 FAM236CP0DP71 79 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 PTHLHP12272 177 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 ORM2P19652 201 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 CCL1P22362 96 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 GADD45AP24522 165 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 GUCA1AP43080 201 aaPredicted RBP1.95□□□□□ -2.1
SCFD1-207ENST00000544052 RPL5P46777 297 aaKnown RBP1.95□□□□□ -2.1
SCFD1-207ENST00000544052 RAB13P51153 203 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 H2BFSP57053 126 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 CDK10Q15131 360 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 ZNF660Q6AZW8 331 aaPredicted RBP1.95□□□□□ -2.1
SCFD1-207ENST00000544052 OTOSQ8NHW6 89 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 CANT1Q8WVQ1 401 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 AQP3Q92482 292 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 SPTSSAQ969W0 71 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 CPNE2Q96FN4 548 aaPredicted RBP1.95□□□□□ -2.1
SCFD1-207ENST00000544052 RNASE7Q9H1E1 156 aaKnown RBP1.95□□□□□ -2.1
SCFD1-207ENST00000544052 HES4Q9HCC6 221 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 ENY2Q9NPA8 101 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 IDI2-AS1Q9NZ38 188 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 FAM32AQ9Y421 112 aaKnown RBP1.95□□□□□ -2.1
SCFD1-207ENST00000544052 PQLC2LA1A4F0 135 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 A6NED7 52 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 TMEM250H0YL14 139 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 H3BSH0 61 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 K7EIL1 84 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 NDUFA2O43678 99 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 HBZP02008 142 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 FGF6P10767 208 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 CAV3P56539 151 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 RAB5BP61020 215 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 EMX1Q04741 257 aaPredicted RBP1.95□□□□□ -2.1
SCFD1-207ENST00000544052 PMAIP1Q13794 54 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 ACOT6Q3I5F7 207 aaPredicted RBP1.95□□□□□ -2.1
SCFD1-207ENST00000544052 TRIQKQ629K1 86 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 EBLN2Q6P2I7 272 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 KRTAP5-5Q701N2 237 aaPredicted RBP1.95□□□□□ -2.1
SCFD1-207ENST00000544052 SMIM15Q7Z3B0 74 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 Q8N2B8 174 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 OR52L1Q8NGH7 329 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 OR5K1Q8NHB7 308 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 H1FXQ92522 213 aaKnown RBP1.95□□□□□ -2.1
SCFD1-207ENST00000544052 C12orf43Q96C57 262 aaKnown RBP1.95□□□□□ -2.1
SCFD1-207ENST00000544052 CARHSP1Q9Y2V2 147 aaKnown RBP1.95□□□□□ -2.1
SCFD1-207ENST00000544052 R4GN34 69 aa1.95□□□□□ -2.1
SCFD1-207ENST00000544052 IGKV1-9A0A0C4DH69 117 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 IGKV1-12A0A0C4DH73 117 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 ARRDC5A6NEK1 342 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 OR4C46A6NHA9 309 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 RFPL4AA6NLU0 287 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 C17orf98A8MV24 154 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 LEUTXA8MZ59 168 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 RFPL4AL1F8VTS6 287 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 M0R1W7 72 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 NDUFB3O43676 98 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 IGKV1D-12P01611 117 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 PIPP12273 146 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-207ENST00000544052 CD24P25063 80 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 PSMB3P49720 205 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 DAPP51397 102 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 SMIM11AP58511 58 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 LINC00313P59037 77 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 DEFA3P59666 94 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 BLCAPP62952 87 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 GNGT1P63211 74 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 HLA-DRB3P79483 266 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 EDDM3AQ14507 147 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 TMEM97Q5BJF2 176 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 RPL13AP3Q6NVV1 102 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 HAGHLQ6PII5 290 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-207ENST00000544052 ANGPTL5Q86XS5 388 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 OR10AC1Q8NH08 325 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 THEM6Q8WUY1 208 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 ACY3Q96HD9 319 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 RTL8AQ9BWD3 113 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 PBOV1Q9GZY1 135 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 GPR84Q9NQS5 396 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 HHLA2Q9UM44 414 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 BAIAP2Q9UQB8 552 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 MPC1Q9Y5U8 109 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 V9GYS6 101 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 PLECQ15149 4684 aaKnown RBP1.94□□□□□ -2.1
SCFD1-207ENST00000544052 TEX50A0A1B0GTY4 177 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 TCRBV3S1A0A5B6 114 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 FUOMA2VDF0 154 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 RIIAD1A6NNX1 92 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 H3BMM0 161 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 C15orf65H3BRN8 121 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 NOS1APO75052 506 aaPredicted RBP1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms