RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 S100A7AQ86SG5 101 aa7.91□□□□□ -1.14
NPIPB3-210ENST00000542817 RNF182Q8N6D2 247 aa7.91□□□□□ -1.14
NPIPB3-210ENST00000542817 OR10D4PQ8NGN7 298 aa7.91□□□□□ -1.14
NPIPB3-210ENST00000542817 FAM213BQ8TBF2 198 aa7.91□□□□□ -1.14
NPIPB3-210ENST00000542817 HIST1H2BHQ93079 126 aa7.91□□□□□ -1.14
NPIPB3-210ENST00000542817 HIST1H2BNQ99877 126 aa7.91□□□□□ -1.14
NPIPB3-210ENST00000542817 HIST1H2BMQ99879 126 aa7.91□□□□□ -1.14
NPIPB3-210ENST00000542817 FAM110AQ9BQ89 295 aa7.91□□□□□ -1.14
NPIPB3-210ENST00000542817 AGRNO00468 2067 aa7.91□□□□□ -1.14
NPIPB3-210ENST00000542817 A0A1W2PPV4 95 aa7.9□□□□□ -1.14
NPIPB3-210ENST00000542817 OR4C46A6NHA9 309 aa7.9□□□□□ -1.14
NPIPB3-210ENST00000542817 ISLRO14498 428 aa7.9□□□□□ -1.14
NPIPB3-210ENST00000542817 OR7C2O60412 319 aa7.9□□□□□ -1.14
NPIPB3-210ENST00000542817 ZNF253O75346 499 aa7.9□□□□□ -1.14
NPIPB3-210ENST00000542817 GCHFRP30047 84 aa7.9□□□□□ -1.14
NPIPB3-210ENST00000542817 TAGLN2P37802 199 aaKnown RBP7.9□□□□□ -1.14
NPIPB3-210ENST00000542817 AKR1C3P42330 323 aa7.9□□□□□ -1.14
NPIPB3-210ENST00000542817 PQLC2Q6ZP29 291 aa7.9□□□□□ -1.14
NPIPB3-210ENST00000542817 APRG1Q8IVJ8 170 aa7.9□□□□□ -1.14
NPIPB3-210ENST00000542817 NDUFAF3Q9BU61 184 aa7.9□□□□□ -1.14
NPIPB3-210ENST00000542817 RNF24Q9Y225 148 aa7.9□□□□□ -1.14
NPIPB3-210ENST00000542817 TGP01266 2768 aa7.89□□□□□ -1.15
NPIPB3-210ENST00000542817 A0A1B0GV90 55 aa7.89□□□□□ -1.15
NPIPB3-210ENST00000542817 MAP1LC3B2A6NCE7 125 aa7.89□□□□□ -1.15
NPIPB3-210ENST00000542817 ZNF705FA8MVS1 300 aaPredicted RBP7.89□□□□□ -1.15
NPIPB3-210ENST00000542817 PRAC2D3DTV9 90 aa7.89□□□□□ -1.15
NPIPB3-210ENST00000542817 PHOX2AO14813 284 aa7.89□□□□□ -1.15
NPIPB3-210ENST00000542817 PSMB3P49720 205 aa7.89□□□□□ -1.15
NPIPB3-210ENST00000542817 TAS2R45P59539 299 aa7.89□□□□□ -1.15
NPIPB3-210ENST00000542817 DEFB131AP59861 70 aa7.89□□□□□ -1.15
NPIPB3-210ENST00000542817 UBE2L3P68036 154 aaKnown RBP7.89□□□□□ -1.15
NPIPB3-210ENST00000542817 PAFAH1B2P68402 229 aa7.89□□□□□ -1.15
NPIPB3-210ENST00000542817 PDE6HQ13956 83 aa7.89□□□□□ -1.15
NPIPB3-210ENST00000542817 ZNF674Q2M3X9 581 aa7.89□□□□□ -1.15
NPIPB3-210ENST00000542817 GDF5OSQ5U4N7 250 aa7.89□□□□□ -1.15
NPIPB3-210ENST00000542817 LINC00322Q6ZN03 302 aaPredicted RBP7.89□□□□□ -1.15
NPIPB3-210ENST00000542817 EXOC3-AS1Q8N2X6 119 aa7.89□□□□□ -1.15
NPIPB3-210ENST00000542817 DEFB125Q8N687 156 aa7.89□□□□□ -1.15
NPIPB3-210ENST00000542817 BLNKQ8WV28 456 aa7.89□□□□□ -1.15
NPIPB3-210ENST00000542817 PYGO2Q9BRQ0 406 aa7.89□□□□□ -1.15
NPIPB3-210ENST00000542817 MAP1LC3BQ9GZQ8 125 aa7.89□□□□□ -1.15
NPIPB3-210ENST00000542817 RBMY1BA6NDE4 496 aaKnown RBP7.88□□□□□ -1.15
NPIPB3-210ENST00000542817 RBMY1EA6NEQ0 496 aaKnown RBP7.88□□□□□ -1.15
NPIPB3-210ENST00000542817 A8MZ25 164 aa7.88□□□□□ -1.15
NPIPB3-210ENST00000542817 OR11H12B2RN74 326 aa7.88□□□□□ -1.15
NPIPB3-210ENST00000542817 F6UB75 175 aa7.88□□□□□ -1.15
NPIPB3-210ENST00000542817 M0R3E3 92 aa7.88□□□□□ -1.15
NPIPB3-210ENST00000542817 CXorf1O96002 111 aa7.88□□□□□ -1.15
NPIPB3-210ENST00000542817 RBMY1DP0C7P1 496 aaKnown RBP7.88□□□□□ -1.15
NPIPB3-210ENST00000542817 PSMG4Q5JS54 123 aa7.88□□□□□ -1.15
NPIPB3-210ENST00000542817 C16orf92Q96LL3 132 aa7.88□□□□□ -1.15
NPIPB3-210ENST00000542817 NIPSNAP3BQ9BS92 247 aa7.88□□□□□ -1.15
NPIPB3-210ENST00000542817 VAX2Q9UIW0 290 aa7.88□□□□□ -1.15
NPIPB3-210ENST00000542817 YTHDF2Q9Y5A9 579 aaKnown RBP7.88□□□□□ -1.15
NPIPB3-210ENST00000542817 DNAH7Q8WXX0 4024 aa7.88□□□□□ -1.15
NPIPB3-210ENST00000542817 KNCNA6PVL3 124 aa7.87□□□□□ -1.15
NPIPB3-210ENST00000542817 GGTLC3B5MD39 225 aa7.87□□□□□ -1.15
NPIPB3-210ENST00000542817 TRGC1P0CF51 173 aa7.87□□□□□ -1.15
NPIPB3-210ENST00000542817 IGHV4-30-4P0DP06 118 aa7.87□□□□□ -1.15
NPIPB3-210ENST00000542817 NUTF2P61970 127 aaKnown RBP7.87□□□□□ -1.15
NPIPB3-210ENST00000542817 PSG3Q16557 428 aa7.87□□□□□ -1.15
NPIPB3-210ENST00000542817 TMEM183AQ8IXX5 376 aa7.87□□□□□ -1.15
NPIPB3-210ENST00000542817 FAM210BQ96KR6 192 aa7.87□□□□□ -1.15
NPIPB3-210ENST00000542817 SRD5A3Q9H8P0 318 aa7.87□□□□□ -1.15
NPIPB3-210ENST00000542817 STAB2Q8WWQ8 2551 aa7.87□□□□□ -1.15
NPIPB3-210ENST00000542817 A0A1B0GV50 99 aa7.86□□□□□ -1.15
NPIPB3-210ENST00000542817 A8MTW9 85 aa7.86□□□□□ -1.15
NPIPB3-210ENST00000542817 TCAPO15273 167 aa7.86□□□□□ -1.15
NPIPB3-210ENST00000542817 CXCL1P09341 107 aa7.86□□□□□ -1.15
NPIPB3-210ENST00000542817 GIG44P09565 113 aaPredicted RBP7.86□□□□□ -1.15
NPIPB3-210ENST00000542817 RANP62826 216 aaKnown RBP7.86□□□□□ -1.15
NPIPB3-210ENST00000542817 ICAM4Q14773 271 aa7.86□□□□□ -1.15
NPIPB3-210ENST00000542817 GTSCR1Q86UQ5 136 aa7.86□□□□□ -1.15
NPIPB3-210ENST00000542817 SLC50A1Q9BRV3 221 aa7.86□□□□□ -1.15
NPIPB3-210ENST00000542817 Q9H3A6 140 aa7.86□□□□□ -1.15
NPIPB3-210ENST00000542817 TMEM167BQ9NRX6 74 aa7.86□□□□□ -1.15
NPIPB3-210ENST00000542817 A0A0J9YX75 114 aa7.85□□□□□ -1.15
NPIPB3-210ENST00000542817 LOC102723971A0A1B0GUV8 181 aa7.85□□□□□ -1.15
NPIPB3-210ENST00000542817 H3BMM0 161 aa7.85□□□□□ -1.15
NPIPB3-210ENST00000542817 TRGC2P03986 189 aa7.85□□□□□ -1.15
NPIPB3-210ENST00000542817 ZNF705DP0CH99 300 aaPredicted RBP7.85□□□□□ -1.15
NPIPB3-210ENST00000542817 ZNF705BP0CI00 300 aaPredicted RBP7.85□□□□□ -1.15
NPIPB3-210ENST00000542817 HLA-DRB4P13762 266 aa7.85□□□□□ -1.15
NPIPB3-210ENST00000542817 ID1P41134 155 aa7.85□□□□□ -1.15
NPIPB3-210ENST00000542817 SNRPD3P62318 126 aaKnown RBP7.85□□□□□ -1.15
NPIPB3-210ENST00000542817 PSG9Q00887 426 aa7.85□□□□□ -1.15
NPIPB3-210ENST00000542817 SAMD13Q5VXD3 122 aa7.85□□□□□ -1.15
NPIPB3-210ENST00000542817 AMTNQ6UX39 209 aa7.85□□□□□ -1.15
NPIPB3-210ENST00000542817 LYPD1Q8N2G4 141 aa7.85□□□□□ -1.15
NPIPB3-210ENST00000542817 BTF3L4Q96K17 158 aa7.85□□□□□ -1.15
NPIPB3-210ENST00000542817 PACRGQ96M98 296 aaPredicted RBP7.85□□□□□ -1.15
NPIPB3-210ENST00000542817 HIST1H2BLQ99880 126 aa7.85□□□□□ -1.15
NPIPB3-210ENST00000542817 HLA-DRB4X5D2U9 266 aa7.85□□□□□ -1.15
NPIPB3-210ENST00000542817 A0A1W2PRE2 83 aa7.84□□□□□ -1.15
NPIPB3-210ENST00000542817 CMC4P56277 68 aaPredicted RBP7.84□□□□□ -1.15
NPIPB3-210ENST00000542817 GAGE1Q13065 139 aa7.84□□□□□ -1.15
NPIPB3-210ENST00000542817 HAGHQ16775 308 aa7.84□□□□□ -1.15
NPIPB3-210ENST00000542817 ACTL10Q5JWF8 245 aa7.84□□□□□ -1.15
NPIPB3-210ENST00000542817 FOXI2Q6ZQN5 318 aa7.84□□□□□ -1.15
NPIPB3-210ENST00000542817 TRPT1Q86TN4 253 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms