RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 FA2HQ7L5A8 372 aa10.2□□□□□ -0.78
LDLR-203ENST00000535915 SVIPQ8NHG7 77 aa10.2□□□□□ -0.78
LDLR-203ENST00000535915 MEGF9Q9H1U4 602 aa10.2□□□□□ -0.78
LDLR-203ENST00000535915 GAGE12BA1L429 117 aa10.2□□□□□ -0.78
LDLR-203ENST00000535915 D6R8Y8 96 aa10.2□□□□□ -0.78
LDLR-203ENST00000535915 G3V318 75 aa10.2□□□□□ -0.78
LDLR-203ENST00000535915 ZNF80P51504 273 aaPredicted RBP10.2□□□□□ -0.78
LDLR-203ENST00000535915 COX8CQ7Z4L0 72 aa10.2□□□□□ -0.78
LDLR-203ENST00000535915 MCRIP2Q9BUT9 160 aaKnown RBP10.2□□□□□ -0.78
LDLR-203ENST00000535915 hDV102S1A0JD36 115 aa10.2□□□□□ -0.78
LDLR-203ENST00000535915 LINC01548A6NM66 108 aa10.2□□□□□ -0.78
LDLR-203ENST00000535915 NPFFO15130 113 aa10.2□□□□□ -0.78
LDLR-203ENST00000535915 GOSR1O95249 250 aa10.2□□□□□ -0.78
LDLR-203ENST00000535915 BMI1P35226 326 aa10.2□□□□□ -0.78
LDLR-203ENST00000535915 CLEC19AQ6UXS0 136 aa10.2□□□□□ -0.78
LDLR-203ENST00000535915 AMN1Q8IY45 258 aa10.2□□□□□ -0.78
LDLR-203ENST00000535915 PIP4P2Q8N4L2 257 aa10.2□□□□□ -0.78
LDLR-203ENST00000535915 ZFAND3Q9H8U3 227 aa10.2□□□□□ -0.78
LDLR-203ENST00000535915 IGHV3-66A0A0C4DH42 116 aa10.19□□□□□ -0.78
LDLR-203ENST00000535915 TAX1BP3O14907 124 aa10.19□□□□□ -0.78
LDLR-203ENST00000535915 UQCRFS1P47985 274 aa10.19□□□□□ -0.78
LDLR-203ENST00000535915 PET117Q6UWS5 81 aa10.19□□□□□ -0.78
LDLR-203ENST00000535915 ITLN2Q8WWU7 325 aaPredicted RBP10.19□□□□□ -0.78
LDLR-203ENST00000535915 CENPVL3A0A0U1RRI6 287 aa10.19□□□□□ -0.78
LDLR-203ENST00000535915 LOC389332A0A1B0GUA5 103 aa10.19□□□□□ -0.78
LDLR-203ENST00000535915 C19orf84I3L1E1 186 aa10.19□□□□□ -0.78
LDLR-203ENST00000535915 BUB3O43684 328 aa10.19□□□□□ -0.78
LDLR-203ENST00000535915 FAM104BQ5XKR9 115 aa10.19□□□□□ -0.78
LDLR-203ENST00000535915 ST20Q9HBF5 79 aa10.19□□□□□ -0.78
LDLR-203ENST00000535915 NUDT3O95989 172 aa10.18□□□□□ -0.78
LDLR-203ENST00000535915 IFI27P40305 119 aaPredicted RBP10.18□□□□□ -0.78
LDLR-203ENST00000535915 RAB9AP51151 201 aa10.18□□□□□ -0.78
LDLR-203ENST00000535915 FER1L6-AS1Q8NA97 138 aa10.18□□□□□ -0.78
LDLR-203ENST00000535915 CCDC140Q96MF4 163 aa10.18□□□□□ -0.78
LDLR-203ENST00000535915 ABCA2Q9BZC7 2435 aa10.18□□□□□ -0.78
LDLR-203ENST00000535915 IGHV3OR16-13A0A075B7E8 117 aa10.18□□□□□ -0.78
LDLR-203ENST00000535915 IGHV3-74A0A0B4J1X5 117 aa10.18□□□□□ -0.78
LDLR-203ENST00000535915 ERCC8Q13216 396 aa10.18□□□□□ -0.78
LDLR-203ENST00000535915 TWIST1Q15672 202 aa10.18□□□□□ -0.78
LDLR-203ENST00000535915 RNF182Q8N6D2 247 aa10.18□□□□□ -0.78
LDLR-203ENST00000535915 OR10AG1Q8NH19 301 aa10.18□□□□□ -0.78
LDLR-203ENST00000535915 PRELID3AQ96N28 172 aa10.18□□□□□ -0.78
LDLR-203ENST00000535915 ORM1P02763 201 aa10.17□□□□□ -0.78
LDLR-203ENST00000535915 ORMDL3Q8N138 153 aa10.17□□□□□ -0.78
LDLR-203ENST00000535915 EEF1AKMT3Q96AZ1 226 aa10.17□□□□□ -0.78
LDLR-203ENST00000535915 PRAC2D3DTV9 90 aa10.17□□□□□ -0.78
LDLR-203ENST00000535915 FAM106AQ4KMX7 169 aa10.17□□□□□ -0.78
LDLR-203ENST00000535915 TMEM219Q86XT9 240 aa10.17□□□□□ -0.78
LDLR-203ENST00000535915 PMCHL2Q9BQD1 86 aa10.17□□□□□ -0.78
LDLR-203ENST00000535915 TP73-AS1Q9UF72 201 aa10.17□□□□□ -0.78
LDLR-203ENST00000535915 IGHV3OR16-10A0A075B7F0 116 aa10.16□□□□□ -0.78
LDLR-203ENST00000535915 A0A087X0K7 114 aa10.16□□□□□ -0.78
LDLR-203ENST00000535915 KLK9Q2XQG4 91 aa10.16□□□□□ -0.78
LDLR-203ENST00000535915 MRPL51Q4U2R6 128 aaKnown RBP10.16□□□□□ -0.78
LDLR-203ENST00000535915 C5orf56Q8N8D9 126 aa10.16□□□□□ -0.78
LDLR-203ENST00000535915 ZNF747Q9BV97 191 aa10.16□□□□□ -0.78
LDLR-203ENST00000535915 SIGLEC8Q9NYZ4 499 aa10.16□□□□□ -0.78
LDLR-203ENST00000535915 KLK9Q9UKQ9 250 aa10.16□□□□□ -0.78
LDLR-203ENST00000535915 U3KQK5 164 aa10.16□□□□□ -0.78
LDLR-203ENST00000535915 IGHV3-49A0A0A0MS15 119 aa10.16□□□□□ -0.78
LDLR-203ENST00000535915 CLPSL1A2RUU4 121 aa10.16□□□□□ -0.78
LDLR-203ENST00000535915 PRSS47A8MTI9 375 aa10.16□□□□□ -0.78
LDLR-203ENST00000535915 FABP5P3A8MUU1 101 aa10.16□□□□□ -0.78
LDLR-203ENST00000535915 GNLYP22749 145 aa10.16□□□□□ -0.78
LDLR-203ENST00000535915 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.16□□□□□ -0.78
LDLR-203ENST00000535915 ZNF207O43670 478 aaKnown RBP10.15□□□□□ -0.78
LDLR-203ENST00000535915 SAP30O75446 220 aa10.15□□□□□ -0.78
LDLR-203ENST00000535915 DEFB125Q8N687 156 aa10.15□□□□□ -0.78
LDLR-203ENST00000535915 TRBV7-1A0A0A6YYK4 115 aa10.15□□□□□ -0.78
LDLR-203ENST00000535915 IGLC6P0CF74 106 aa10.15□□□□□ -0.78
LDLR-203ENST00000535915 CKS2P33552 79 aa10.15□□□□□ -0.78
LDLR-203ENST00000535915 LOXL1Q08397 574 aaPredicted RBP10.15□□□□□ -0.78
LDLR-203ENST00000535915 LINC01545Q5VT33 79 aa10.15□□□□□ -0.78
LDLR-203ENST00000535915 SLC50A1Q9BRV3 221 aa10.15□□□□□ -0.78
LDLR-203ENST00000535915 SPTAN1Q13813 2472 aaKnown RBP10.15□□□□□ -0.78
LDLR-203ENST00000535915 BVES-AS1Q5T3Y7 98 aa10.14□□□□□ -0.79
LDLR-203ENST00000535915 METTL26Q96S19 204 aa10.14□□□□□ -0.79
LDLR-203ENST00000535915 PRORYQ9H606 182 aa10.14□□□□□ -0.79
LDLR-203ENST00000535915 COL12A1Q99715 3063 aa10.14□□□□□ -0.79
LDLR-203ENST00000535915 MAP1AP78559 2803 aaPredicted RBP10.14□□□□□ -0.79
LDLR-203ENST00000535915 SMKR1H3BMG3 65 aa10.14□□□□□ -0.79
LDLR-203ENST00000535915 IGHV4-39P01824 125 aa10.14□□□□□ -0.79
LDLR-203ENST00000535915 SLC25A34Q6PIV7 304 aa10.14□□□□□ -0.79
LDLR-203ENST00000535915 C12orf54Q6X4T0 127 aa10.14□□□□□ -0.79
LDLR-203ENST00000535915 IL17RELQ6ZVW7 336 aa10.14□□□□□ -0.79
LDLR-203ENST00000535915 LINC00527Q9UJ94 153 aa10.14□□□□□ -0.79
LDLR-203ENST00000535915 SRSF2Q01130 221 aaKnown RBP10.14□□□□□ -0.79
LDLR-203ENST00000535915 ATP5G2Q06055 141 aa10.14□□□□□ -0.79
LDLR-203ENST00000535915 ZNF575Q86XF7 245 aa10.14□□□□□ -0.79
LDLR-203ENST00000535915 OR8A1Q8NGG7 326 aa10.14□□□□□ -0.79
LDLR-203ENST00000535915 A0A096LNJ9 63 aa10.13□□□□□ -0.79
LDLR-203ENST00000535915 RBAKDNA6NC62 111 aa10.13□□□□□ -0.79
LDLR-203ENST00000535915 MSRB1Q9NZV6 116 aa10.13□□□□□ -0.79
LDLR-203ENST00000535915 MOB4Q9Y3A3 225 aa10.13□□□□□ -0.79
LDLR-203ENST00000535915 TRAV41A0A0B4J266 112 aa10.13□□□□□ -0.79
LDLR-203ENST00000535915 NCR2O95944 276 aa10.13□□□□□ -0.79
LDLR-203ENST00000535915 NPYP01303 97 aa10.13□□□□□ -0.79
LDLR-203ENST00000535915 FXYD7P58549 80 aa10.13□□□□□ -0.79
LDLR-203ENST00000535915 BRD3OSQ6XYD6 125 aa10.13□□□□□ -0.79
LDLR-203ENST00000535915 SCRT2Q9NQ03 307 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms