RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 TRAV8-1A0A0A6YYK1 113 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 A0A1B0GX51 115 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 C9JAW5 83 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 WISP1O95388 367 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 NCR2O95944 276 aa3.19□□□□□ -1.9
SOX6-217ENST00000533870 ANKRD36A6QL64 1941 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 CXCL5P42830 114 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 C9orf153Q5TBE3 101 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 C9orf47Q6ZRZ4 202 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 Q6ZUT4 128 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 C2orf91Q6ZV80 131 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 RITA1Q96K30 269 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 NDUFA12Q9UI09 145 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 COL11A1P12107 1806 aaPredicted RBP3.18□□□□□ -1.9
SOX6-217ENST00000533870 DOCK4Q8N1I0 1966 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 IGHV3-72A0A0B4J1Y9 119 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 LEPROTO15243 131 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 CRPP02741 224 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 GATA3P23771 443 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 UBE2D1P51668 147 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 ZNF580Q9UK33 172 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 MCM3APO60318 1980 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 CEP250Q9BV73 2442 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 EPOPA6NHQ4 379 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 UQCRQO14949 82 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 DSCR9P59020 149 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 ZNF784Q8NCA9 323 aaPredicted RBP3.18□□□□□ -1.9
SOX6-217ENST00000533870 LEAP2Q969E1 77 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 SPRR3Q9UBC9 169 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 PYGO1Q9Y3Y4 419 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 TRAV13-2A0A0B4J235 113 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 FAM90A27PA6NNH2 459 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 TRGV3P03979 118 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 FGF6P10767 208 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 PCP2Q8IVA1 136 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 TOMM6Q96B49 74 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 SHANK1Q9Y566 2161 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 ZDBF2Q9HCK1 2354 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 WNK2Q9Y3S1 2297 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 EFNA4P52798 201 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 RPL36AP83881 106 aaKnown RBP3.18□□□□□ -1.9
SOX6-217ENST00000533870 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 VMO1Q7Z5L0 202 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 SLC25A29Q8N8R3 303 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 C20orf203Q8NBC4 194 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 RPL36ALQ969Q0 106 aaKnown RBP3.18□□□□□ -1.9
SOX6-217ENST00000533870 PPDPFQ9H3Y8 114 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 ZSWIM8A7E2V4 1837 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 CACNA1IQ9P0X4 2223 aa3.18□□□□□ -1.9
SOX6-217ENST00000533870 BRCA1P38398 1863 aaKnown RBP3.18□□□□□ -1.9
SOX6-217ENST00000533870 TRBV30A0A0K0K1B3 111 aa3.17□□□□□ -1.9
SOX6-217ENST00000533870 SAP30O75446 220 aa3.17□□□□□ -1.9
SOX6-217ENST00000533870 CD28P10747 220 aa3.17□□□□□ -1.9
SOX6-217ENST00000533870 FOXC1Q12948 553 aa3.17□□□□□ -1.9
SOX6-217ENST00000533870 FBXL19-AS1Q494R0 122 aa3.17□□□□□ -1.9
SOX6-217ENST00000533870 ANKHD1Q8IWZ3 2542 aaKnown RBP3.17□□□□□ -1.9
SOX6-217ENST00000533870 JMJD7-PLA2G4BH0Y9G9 81 aa3.17□□□□□ -1.9
SOX6-217ENST00000533870 I3L3M4 83 aa3.17□□□□□ -1.9
SOX6-217ENST00000533870 ZNHIT1O43257 154 aa3.17□□□□□ -1.9
SOX6-217ENST00000533870 HERVK_113P63121 156 aa3.17□□□□□ -1.9
SOX6-217ENST00000533870 C15orf32Q32M92 178 aa3.17□□□□□ -1.9
SOX6-217ENST00000533870 VSIG2Q96IQ7 327 aa3.17□□□□□ -1.9
SOX6-217ENST00000533870 HES7Q9BYE0 225 aa3.17□□□□□ -1.9
SOX6-217ENST00000533870 SOCS3O14543 225 aa3.17□□□□□ -1.9
SOX6-217ENST00000533870 IGLV2-23P01705 113 aa3.17□□□□□ -1.9
SOX6-217ENST00000533870 NDUFA11Q86Y39 141 aa3.17□□□□□ -1.9
SOX6-217ENST00000533870 DKK2Q9UBU2 259 aa3.17□□□□□ -1.9
SOX6-217ENST00000533870 TP53TG1Q9Y2A0 90 aa3.17□□□□□ -1.9
SOX6-217ENST00000533870 PLXNA4Q9HCM2 1894 aa3.17□□□□□ -1.9
SOX6-217ENST00000533870 Q8N1Y9 231 aa3.17□□□□□ -1.9
SOX6-217ENST00000533870 PEMTQ9UBM1 199 aa3.17□□□□□ -1.9
SOX6-217ENST00000533870 MYO7AQ13402 2215 aa3.17□□□□□ -1.9
SOX6-217ENST00000533870 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.17□□□□□ -1.9
SOX6-217ENST00000533870 ZNF503-AS2A6NEH8 195 aa3.17□□□□□ -1.9
SOX6-217ENST00000533870 NPFFO15130 113 aa3.17□□□□□ -1.9
SOX6-217ENST00000533870 BCE1O60756 84 aa3.17□□□□□ -1.9
SOX6-217ENST00000533870 NFE4Q86UQ8 179 aa3.17□□□□□ -1.9
SOX6-217ENST00000533870 FNDC1Q4ZHG4 1894 aaPredicted RBP3.16□□□□□ -1.9
SOX6-217ENST00000533870 BUB3O43684 328 aa3.16□□□□□ -1.9
SOX6-217ENST00000533870 CTSGP08311 255 aa3.16□□□□□ -1.9
SOX6-217ENST00000533870 ZNF672Q499Z4 452 aaPredicted RBP3.16□□□□□ -1.9
SOX6-217ENST00000533870 LRRC75A-AS1Q8N1F1 130 aa3.16□□□□□ -1.9
SOX6-217ENST00000533870 NAA38Q9BRA0 125 aaKnown RBP3.16□□□□□ -1.9
SOX6-217ENST00000533870 TEX22C9J3V5 150 aa3.16□□□□□ -1.9
SOX6-217ENST00000533870 ELANEP08246 267 aa3.16□□□□□ -1.9
SOX6-217ENST00000533870 LPAL2Q16609 132 aa3.16□□□□□ -1.9
SOX6-217ENST00000533870 KLK15Q9H2R5 256 aa3.16□□□□□ -1.9
SOX6-217ENST00000533870 ZNFX1Q9P2E3 1918 aaKnown RBP3.16□□□□□ -1.9
SOX6-217ENST00000533870 DOCK6Q96HP0 2047 aa3.16□□□□□ -1.9
SOX6-217ENST00000533870 FER1L6Q2WGJ9 1857 aa3.16□□□□□ -1.9
SOX6-217ENST00000533870 IGHV3-21A0A0B4J1V1 117 aa3.16□□□□□ -1.9
SOX6-217ENST00000533870 CENPVL3A0A0U1RRI6 287 aa3.16□□□□□ -1.9
SOX6-217ENST00000533870 LINC01546A6NGU7 62 aa3.16□□□□□ -1.9
SOX6-217ENST00000533870 PATE3B3GLJ2 98 aa3.16□□□□□ -1.9
SOX6-217ENST00000533870 FAM27E3Q08E93 113 aa3.16□□□□□ -1.9
SOX6-217ENST00000533870 MRGPRG-AS1Q2M3A8 158 aa3.16□□□□□ -1.9
SOX6-217ENST00000533870 KLK9Q2XQG4 91 aa3.16□□□□□ -1.9
SOX6-217ENST00000533870 NEXN-AS1Q8NBZ9 246 aa3.16□□□□□ -1.9
SOX6-217ENST00000533870 KLK9Q9UKQ9 250 aa3.16□□□□□ -1.9
SOX6-217ENST00000533870 TRBV7-3A0A075B6L6 115 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms