RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 GFI1BQ5VTD9 330 aa7.35□□□□□ -1.23
CPSF1-203ENST00000527916 LINC00612Q8N6U2 182 aa7.35□□□□□ -1.23
CPSF1-203ENST00000527916 FRZBQ92765 325 aa7.35□□□□□ -1.23
CPSF1-203ENST00000527916 PYGO2Q9BRQ0 406 aa7.35□□□□□ -1.23
CPSF1-203ENST00000527916 WDR61Q9GZS3 305 aaKnown RBP7.35□□□□□ -1.23
CPSF1-203ENST00000527916 KCNIP2Q9NS61 270 aa7.35□□□□□ -1.23
CPSF1-203ENST00000527916 OR5AC2Q9NZP5 309 aa7.35□□□□□ -1.23
CPSF1-203ENST00000527916 TIMM9Q9Y5J7 89 aa7.35□□□□□ -1.23
CPSF1-203ENST00000527916 F5H768 121 aa7.34□□□□□ -1.23
CPSF1-203ENST00000527916 SLC25A5P05141 298 aaKnown RBP7.34□□□□□ -1.23
CPSF1-203ENST00000527916 NMBP08949 121 aa7.34□□□□□ -1.23
CPSF1-203ENST00000527916 BTF3P20290 206 aaKnown RBP7.34□□□□□ -1.23
CPSF1-203ENST00000527916 H2BFSP57053 126 aa7.34□□□□□ -1.23
CPSF1-203ENST00000527916 DEFA1P59665 94 aa7.34□□□□□ -1.23
CPSF1-203ENST00000527916 DEFA3P59666 94 aa7.34□□□□□ -1.23
CPSF1-203ENST00000527916 KRTAP10-2P60368 255 aa7.34□□□□□ -1.23
CPSF1-203ENST00000527916 TTC32Q5I0X7 151 aa7.34□□□□□ -1.23
CPSF1-203ENST00000527916 C9orf47Q6ZRZ4 202 aa7.34□□□□□ -1.23
CPSF1-203ENST00000527916 THAP6Q8TBB0 222 aa7.34□□□□□ -1.23
CPSF1-203ENST00000527916 PPP1R1CQ8WVI7 109 aa7.34□□□□□ -1.23
CPSF1-203ENST00000527916 FAM167A-AS1Q96KT0 104 aa7.34□□□□□ -1.23
CPSF1-203ENST00000527916 FAM19A4Q96LR4 140 aa7.34□□□□□ -1.23
CPSF1-203ENST00000527916 LINC00467Q9BRT7 94 aa7.34□□□□□ -1.23
CPSF1-203ENST00000527916 SLC25A2Q9BXI2 301 aa7.34□□□□□ -1.23
CPSF1-203ENST00000527916 MRPL32Q9BYC8 188 aaKnown RBP7.34□□□□□ -1.23
CPSF1-203ENST00000527916 PARD6GQ9BYG4 376 aaPredicted RBP7.34□□□□□ -1.23
CPSF1-203ENST00000527916 AAMDCQ9H7C9 122 aa7.34□□□□□ -1.23
CPSF1-203ENST00000527916 NOP10Q9NPE3 64 aaKnown RBP7.34□□□□□ -1.23
CPSF1-203ENST00000527916 KLLNB2CW77 178 aa7.33□□□□□ -1.24
CPSF1-203ENST00000527916 C17orf112F2Z3M2 114 aa7.33□□□□□ -1.24
CPSF1-203ENST00000527916 M0R3E3 92 aa7.33□□□□□ -1.24
CPSF1-203ENST00000527916 NUDT3O95989 172 aa7.33□□□□□ -1.24
CPSF1-203ENST00000527916 NBEAP1P0C6P0 100 aa7.33□□□□□ -1.24
CPSF1-203ENST00000527916 PET100P0DJ07 73 aa7.33□□□□□ -1.24
CPSF1-203ENST00000527916 PYYP10082 97 aa7.33□□□□□ -1.24
CPSF1-203ENST00000527916 PRB4P10163 310 aaPredicted RBP7.33□□□□□ -1.24
CPSF1-203ENST00000527916 DAZ2Q13117 558 aaKnown RBP7.33□□□□□ -1.24
CPSF1-203ENST00000527916 LRRC37A5PQ49AS3 106 aa7.33□□□□□ -1.24
CPSF1-203ENST00000527916 GCSAMLQ5JQS6 135 aa7.33□□□□□ -1.24
CPSF1-203ENST00000527916 Q5VSD8 79 aa7.33□□□□□ -1.24
CPSF1-203ENST00000527916 C18orf15Q96N68 181 aa7.33□□□□□ -1.24
CPSF1-203ENST00000527916 AGPAT4-IT1Q9H0P7 198 aa7.33□□□□□ -1.24
CPSF1-203ENST00000527916 OR51M1Q9H341 326 aa7.33□□□□□ -1.24
CPSF1-203ENST00000527916 BATF3Q9NR55 127 aa7.33□□□□□ -1.24
CPSF1-203ENST00000527916 TRAV12-3A0A0B4J271 114 aa7.32□□□□□ -1.24
CPSF1-203ENST00000527916 C7orf71A4D174 169 aa7.32□□□□□ -1.24
CPSF1-203ENST00000527916 SNURFLB1AK76 121 aa7.32□□□□□ -1.24
CPSF1-203ENST00000527916 H3BNG1 76 aa7.32□□□□□ -1.24
CPSF1-203ENST00000527916 ZNF324O75467 553 aaPredicted RBP7.32□□□□□ -1.24
CPSF1-203ENST00000527916 MPC2O95563 127 aa7.32□□□□□ -1.24
CPSF1-203ENST00000527916 CRISP2P16562 243 aa7.32□□□□□ -1.24
CPSF1-203ENST00000527916 CLINT1Q14677 625 aa7.32□□□□□ -1.24
CPSF1-203ENST00000527916 MIR17HGQ75NE6 70 aa7.32□□□□□ -1.24
CPSF1-203ENST00000527916 LYPD1Q8N2G4 141 aa7.32□□□□□ -1.24
CPSF1-203ENST00000527916 ZNF503Q96F45 646 aa7.32□□□□□ -1.24
CPSF1-203ENST00000527916 ATP5SQ99766 215 aa7.32□□□□□ -1.24
CPSF1-203ENST00000527916 FAT1Q14517 4588 aa7.32□□□□□ -1.24
CPSF1-203ENST00000527916 TRBV7-9A0A0J9YWB2 115 aa7.31□□□□□ -1.24
CPSF1-203ENST00000527916 ERCC8Q13216 396 aa7.31□□□□□ -1.24
CPSF1-203ENST00000527916 ICAM4Q14773 271 aa7.31□□□□□ -1.24
CPSF1-203ENST00000527916 ANXA2RQ3ZCQ2 193 aa7.31□□□□□ -1.24
CPSF1-203ENST00000527916 EXOC3-AS1Q8N2X6 119 aa7.31□□□□□ -1.24
CPSF1-203ENST00000527916 ZNF680Q8NEM1 530 aa7.31□□□□□ -1.24
CPSF1-203ENST00000527916 BLNKQ8WV28 456 aa7.31□□□□□ -1.24
CPSF1-203ENST00000527916 RNF141Q8WVD5 230 aa7.31□□□□□ -1.24
CPSF1-203ENST00000527916 FXYD5Q96DB9 178 aa7.31□□□□□ -1.24
CPSF1-203ENST00000527916 PAXXQ9BUH6 204 aa7.31□□□□□ -1.24
CPSF1-203ENST00000527916 Q9H8V8 135 aa7.31□□□□□ -1.24
CPSF1-203ENST00000527916 FUT9Q9Y231 359 aa7.31□□□□□ -1.24
CPSF1-203ENST00000527916 LINC00588Q9Y4M8 146 aa7.31□□□□□ -1.24
CPSF1-203ENST00000527916 HSPB11Q9Y547 144 aa7.31□□□□□ -1.24
CPSF1-203ENST00000527916 J3KRW8 73 aa7.3□□□□□ -1.24
CPSF1-203ENST00000527916 J3QL48 77 aa7.3□□□□□ -1.24
CPSF1-203ENST00000527916 SSNA1O43805 119 aa7.3□□□□□ -1.24
CPSF1-203ENST00000527916 M6PRP20645 277 aa7.3□□□□□ -1.24
CPSF1-203ENST00000527916 RPL12P30050 165 aaKnown RBP7.3□□□□□ -1.24
CPSF1-203ENST00000527916 TMEM78Q5T7P6 136 aa7.3□□□□□ -1.24
CPSF1-203ENST00000527916 RXFP4Q8TDU9 374 aa7.3□□□□□ -1.24
CPSF1-203ENST00000527916 PGPEP1Q9NXJ5 209 aa7.3□□□□□ -1.24
CPSF1-203ENST00000527916 ZNF492Q9P255 531 aa7.3□□□□□ -1.24
CPSF1-203ENST00000527916 UBR4Q5T4S7 5183 aa7.3□□□□□ -1.24
CPSF1-203ENST00000527916 RBAKDNA6NC62 111 aa7.29□□□□□ -1.24
CPSF1-203ENST00000527916 IFNA5P01569 189 aa7.29□□□□□ -1.24
CPSF1-203ENST00000527916 GPX1P07203 203 aa7.29□□□□□ -1.24
CPSF1-203ENST00000527916 OR10J4P0C629 311 aa7.29□□□□□ -1.24
CPSF1-203ENST00000527916 CD300CQ08708 224 aa7.29□□□□□ -1.24
CPSF1-203ENST00000527916 IBA57Q5T440 356 aaKnown RBP7.29□□□□□ -1.24
CPSF1-203ENST00000527916 FAM122CQ6P4D5 195 aa7.29□□□□□ -1.24
CPSF1-203ENST00000527916 SSX7Q7RTT5 188 aa7.29□□□□□ -1.24
CPSF1-203ENST00000527916 EIF4E3Q8N5X7 224 aaKnown RBP7.29□□□□□ -1.24
CPSF1-203ENST00000527916 ZFAND2AQ8N6M9 145 aa7.29□□□□□ -1.24
CPSF1-203ENST00000527916 C11orf72Q8NBR9 251 aa7.29□□□□□ -1.24
CPSF1-203ENST00000527916 SCGB1C1Q8TD33 95 aa7.29□□□□□ -1.24
CPSF1-203ENST00000527916 GNPNAT1Q96EK6 184 aaPredicted RBP7.29□□□□□ -1.24
CPSF1-203ENST00000527916 IGKV2-40A0A087WW87 121 aaPredicted RBP7.28□□□□□ -1.24
CPSF1-203ENST00000527916 A0A1W2PPQ1 181 aa7.28□□□□□ -1.24
CPSF1-203ENST00000527916 GAGE12BA1L429 117 aa7.28□□□□□ -1.24
CPSF1-203ENST00000527916 EREGO14944 169 aa7.28□□□□□ -1.24
CPSF1-203ENST00000527916 GAGE7O76087 117 aa7.28□□□□□ -1.24
CPSF1-203ENST00000527916 IGKV2D-40P01614 121 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms