RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 HRH1P35367 487 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 TAS2R46P59540 309 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 FXYD4P59646 89 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 RAB5BP61020 215 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 RPL30P62888 115 aaKnown RBP2.37□□□□□ -2.03
CD44-219ENST00000525685 CLINT1Q14677 625 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 MMDQ15546 238 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 MRPL23Q16540 153 aaKnown RBP2.37□□□□□ -2.03
CD44-219ENST00000525685 PDZD11Q5EBL8 140 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 CLLU1Q5K131 121 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 VAX1Q5SQQ9 334 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 SAMD13Q5VXD3 122 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 C10orf99Q6UWK7 81 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 ZNF493Q6ZR52 646 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 SSX7Q7RTT5 188 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 SLC35E3Q7Z769 313 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 PDPNQ86YL7 162 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 Q8N976 141 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 OR5H2Q8NGV7 314 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 TERB2Q8NHR7 220 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 CASTOR1Q8WTX7 329 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 C15orf40Q8WUR7 153 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 SMIM4Q8WVI0 70 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 S100ZQ8WXG8 99 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 DIRAS2Q96HU8 199 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 P2RX4Q99571 388 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 NDFIP1Q9BT67 221 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 FBXL15Q9H469 300 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 TAS2R8Q9NYW2 309 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 MTFP1Q9UDX5 166 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 WASHC3Q9Y3C0 194 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 RBM7Q9Y580 266 aaKnown RBP2.37□□□□□ -2.03
CD44-219ENST00000525685 F11RQ9Y624 299 aaKnown RBP2.37□□□□□ -2.03
CD44-219ENST00000525685 V9GYH0 126 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 TLN2Q9Y4G6 2542 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 NF1P21359 2839 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 C20orf202A1L168 122 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 IGSF23A1L1A6 192 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 PLAC8L1A1L4L8 177 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 NCBP2LA6PVI3 153 aaKnown RBP2.36□□□□□ -2.03
CD44-219ENST00000525685 PPP5D1E7EU14 171 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 F6UB75 175 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 INS-IGF2F8WCM5 200 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 OR2J3O76001 311 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 CNIH1O95406 144 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 CA2P00918 260 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 CD74P04233 296 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 CD3DP04234 171 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 IL7P13232 177 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 S100A7P31151 101 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 LGALS7P47929 136 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 OR2B8PP59922 312 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 PLP1P60201 277 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 UBE2KP61086 200 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 RRAS2P62070 204 aaPredicted RBP2.36□□□□□ -2.03
CD44-219ENST00000525685 MRPS10P82664 201 aaKnown RBP2.36□□□□□ -2.03
CD44-219ENST00000525685 SSBP1Q04837 148 aaKnown RBP2.36□□□□□ -2.03
CD44-219ENST00000525685 CATR1Q13166 79 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 MSMO1Q15800 293 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 RTL8BQ17RB0 113 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 AADACL3Q5VUY0 350 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 ZNF818PQ6ZRF7 136 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 LHFPL1Q86WI0 220 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 BAP18Q8IXM2 172 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 TMEM229BQ8NBD8 167 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 INO80EQ8NBZ0 244 aaPredicted RBP2.36□□□□□ -2.03
CD44-219ENST00000525685 LFNGQ8NES3 379 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 OR4C16Q8NGL9 310 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 FLYWCH2Q96CP2 140 aaKnown RBP2.36□□□□□ -2.03
CD44-219ENST00000525685 ADTRPQ96IZ2 230 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 HSD17B10Q99714 261 aaKnown RBP2.36□□□□□ -2.03
CD44-219ENST00000525685 RNF5Q99942 180 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 CCDC32Q9BV29 185 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 PARP11Q9NR21 331 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 LINC00527Q9UJ94 153 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 ZFP30Q9Y2G7 519 aa2.36□□□□□ -2.03
CD44-219ENST00000525685 FBN1P35555 2871 aaKnown RBP2.36□□□□□ -2.03
CD44-219ENST00000525685 ANKRD20A5PA0PJZ0 165 aa2.35□□□□□ -2.03
CD44-219ENST00000525685 SMIM9A6NGZ8 99 aa2.35□□□□□ -2.03
CD44-219ENST00000525685 A8MWP6 167 aa2.35□□□□□ -2.03
CD44-219ENST00000525685 F5H768 121 aa2.35□□□□□ -2.03
CD44-219ENST00000525685 G3V318 75 aa2.35□□□□□ -2.03
CD44-219ENST00000525685 GPR31O00270 319 aa2.35□□□□□ -2.03
CD44-219ENST00000525685 SLC17A3O00476 420 aa2.35□□□□□ -2.03
CD44-219ENST00000525685 RBFOX2O43251 390 aaKnown RBP eCLIP2.35□□□□□ -2.03
CD44-219ENST00000525685 GSTZ1O43708 216 aaPredicted RBP2.35□□□□□ -2.03
CD44-219ENST00000525685 SSNA1O43805 119 aa2.35□□□□□ -2.03
CD44-219ENST00000525685 PDE6DO43924 150 aa2.35□□□□□ -2.03
CD44-219ENST00000525685 PGLYRP1O75594 196 aaPredicted RBP2.35□□□□□ -2.03
CD44-219ENST00000525685 S1PR2O95136 353 aa2.35□□□□□ -2.03
CD44-219ENST00000525685 IFNA7P01567 189 aa2.35□□□□□ -2.03
CD44-219ENST00000525685 AKAIN1P0CW23 69 aa2.35□□□□□ -2.03
CD44-219ENST00000525685 SAA1P0DJI8 122 aaPredicted RBP2.35□□□□□ -2.03
CD44-219ENST00000525685 C8orf88P0DMB2 117 aa2.35□□□□□ -2.03
CD44-219ENST00000525685 ETV6P41212 452 aa2.35□□□□□ -2.03
CD44-219ENST00000525685 RAB5CP51148 216 aa2.35□□□□□ -2.03
CD44-219ENST00000525685 SLC35B1P78383 322 aa2.35□□□□□ -2.03
CD44-219ENST00000525685 ERCC8Q13216 396 aa2.35□□□□□ -2.03
CD44-219ENST00000525685 PLGLAQ15195 96 aa2.35□□□□□ -2.03
CD44-219ENST00000525685 VMA21Q3ZAQ7 101 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms