RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 CSN1S1P47710 185 aa12.2□□□□□ -0.46
CCNC-213ENST00000523541 ATP5G3P48201 142 aa12.2□□□□□ -0.46
CCNC-213ENST00000523541 ZNF266Q14584 549 aa12.2□□□□□ -0.46
CCNC-213ENST00000523541 ACOT6Q3I5F7 207 aaPredicted RBP12.2□□□□□ -0.46
CCNC-213ENST00000523541 KHDC3LQ587J8 217 aa12.2□□□□□ -0.46
CCNC-213ENST00000523541 TMEM78Q5T7P6 136 aa12.2□□□□□ -0.46
CCNC-213ENST00000523541 EXOC3-AS1Q8N2X6 119 aa12.2□□□□□ -0.46
CCNC-213ENST00000523541 FRAS1Q86XX4 4008 aa12.19□□□□□ -0.46
CCNC-213ENST00000523541 RBAKDNA6NC62 111 aa12.19□□□□□ -0.46
CCNC-213ENST00000523541 J3KRW8 73 aa12.19□□□□□ -0.46
CCNC-213ENST00000523541 M6PRP20645 277 aa12.19□□□□□ -0.46
CCNC-213ENST00000523541 KIR3DS1Q14943 382 aa12.19□□□□□ -0.46
CCNC-213ENST00000523541 ARL6IP6Q8N6S5 226 aa12.19□□□□□ -0.46
CCNC-213ENST00000523541 RXFP4Q8TDU9 374 aa12.19□□□□□ -0.46
CCNC-213ENST00000523541 AQP10Q96PS8 301 aa12.19□□□□□ -0.46
CCNC-213ENST00000523541 SMIM3Q9BZL3 60 aa12.19□□□□□ -0.46
CCNC-213ENST00000523541 TRAV12-3A0A0B4J271 114 aa12.18□□□□□ -0.46
CCNC-213ENST00000523541 C7orf71A4D174 169 aa12.18□□□□□ -0.46
CCNC-213ENST00000523541 M0R2N4 97 aa12.18□□□□□ -0.46
CCNC-213ENST00000523541 ZNF324O75467 553 aaPredicted RBP12.18□□□□□ -0.46
CCNC-213ENST00000523541 GIPP09681 153 aaPredicted RBP12.18□□□□□ -0.46
CCNC-213ENST00000523541 OR10J4P0C629 311 aa12.18□□□□□ -0.46
CCNC-213ENST00000523541 FAM3BP58499 235 aaPredicted RBP12.18□□□□□ -0.46
CCNC-213ENST00000523541 FCN2Q15485 313 aa12.18□□□□□ -0.46
CCNC-213ENST00000523541 TMEM88Q6PEY1 159 aa12.18□□□□□ -0.46
CCNC-213ENST00000523541 PQLC2Q6ZP29 291 aa12.18□□□□□ -0.46
CCNC-213ENST00000523541 WFDC1Q9HC57 220 aa12.18□□□□□ -0.46
CCNC-213ENST00000523541 NOP10Q9NPE3 64 aaKnown RBP12.18□□□□□ -0.46
CCNC-213ENST00000523541 A0A1W2PPV4 95 aa12.17□□□□□ -0.46
CCNC-213ENST00000523541 SNURFLB1AK76 121 aa12.17□□□□□ -0.46
CCNC-213ENST00000523541 GPX1P07203 203 aa12.17□□□□□ -0.46
CCNC-213ENST00000523541 RANP62826 216 aaKnown RBP12.17□□□□□ -0.46
CCNC-213ENST00000523541 DAZ2Q13117 558 aaKnown RBP12.17□□□□□ -0.46
CCNC-213ENST00000523541 ERCC8Q13216 396 aa12.17□□□□□ -0.46
CCNC-213ENST00000523541 ANXA2RQ3ZCQ2 193 aa12.17□□□□□ -0.46
CCNC-213ENST00000523541 FAM122CQ6P4D5 195 aa12.17□□□□□ -0.46
CCNC-213ENST00000523541 LINC00612Q8N6U2 182 aa12.17□□□□□ -0.46
CCNC-213ENST00000523541 ZNF680Q8NEM1 530 aa12.17□□□□□ -0.46
CCNC-213ENST00000523541 ZNF503Q96F45 646 aa12.17□□□□□ -0.46
CCNC-213ENST00000523541 ZNF492Q9P255 531 aa12.17□□□□□ -0.46
CCNC-213ENST00000523541 LENEPQ9Y5L5 61 aa12.17□□□□□ -0.46
CCNC-213ENST00000523541 F5H768 121 aa12.16□□□□□ -0.46
CCNC-213ENST00000523541 ZNF138P52744 262 aa12.16□□□□□ -0.46
CCNC-213ENST00000523541 UBE2L3P68036 154 aaKnown RBP12.16□□□□□ -0.46
CCNC-213ENST00000523541 SERF2P84101 59 aa12.16□□□□□ -0.46
CCNC-213ENST00000523541 FAM74A1Q5RGS3 127 aa12.16□□□□□ -0.46
CCNC-213ENST00000523541 OR2G3Q8NGZ4 309 aa12.16□□□□□ -0.46
CCNC-213ENST00000523541 MBP02144 154 aa12.15□□□□□ -0.46
CCNC-213ENST00000523541 EIF4E3Q8N5X7 224 aaKnown RBP12.15□□□□□ -0.46
CCNC-213ENST00000523541 INO80EQ8NBZ0 244 aaPredicted RBP12.15□□□□□ -0.46
CCNC-213ENST00000523541 TMED6Q8WW62 240 aa12.15□□□□□ -0.46
CCNC-213ENST00000523541 PHYHIPLQ96FC7 376 aa12.15□□□□□ -0.46
CCNC-213ENST00000523541 ATG101Q9BSB4 218 aa12.15□□□□□ -0.46
CCNC-213ENST00000523541 PSMG3Q9BT73 122 aaPredicted RBP12.15□□□□□ -0.46
CCNC-213ENST00000523541 Q9H3A6 140 aa12.15□□□□□ -0.46
CCNC-213ENST00000523541 IGLV2-18A0A075B6J9 118 aa12.14□□□□□ -0.47
CCNC-213ENST00000523541 RNASE4P34096 147 aaKnown RBP12.14□□□□□ -0.47
CCNC-213ENST00000523541 RGS21Q2M5E4 152 aa12.14□□□□□ -0.47
CCNC-213ENST00000523541 LGALS9BQ3B8N2 356 aa12.14□□□□□ -0.47
CCNC-213ENST00000523541 OR10G4Q8NGN3 311 aa12.14□□□□□ -0.47
CCNC-213ENST00000523541 OR10G9Q8NGN4 311 aa12.14□□□□□ -0.47
CCNC-213ENST00000523541 OR10G7Q8NGN6 311 aa12.14□□□□□ -0.47
CCNC-213ENST00000523541 C18orf15Q96N68 181 aa12.14□□□□□ -0.47
CCNC-213ENST00000523541 VGLL1Q99990 258 aa12.14□□□□□ -0.47
CCNC-213ENST00000523541 OTORQ9NRC9 128 aa12.14□□□□□ -0.47
CCNC-213ENST00000523541 IGKV2-40A0A087WW87 121 aaPredicted RBP12.13□□□□□ -0.47
CCNC-213ENST00000523541 IGKV2D-40P01614 121 aaPredicted RBP12.13□□□□□ -0.47
CCNC-213ENST00000523541 IBA57Q5T440 356 aaKnown RBP12.13□□□□□ -0.47
CCNC-213ENST00000523541 LINC00336Q6ZUF6 198 aa12.13□□□□□ -0.47
CCNC-213ENST00000523541 ZFAND2AQ8N6M9 145 aa12.13□□□□□ -0.47
CCNC-213ENST00000523541 DIRC3C9JPN6 131 aa12.12□□□□□ -0.47
CCNC-213ENST00000523541 H3BNG1 76 aa12.12□□□□□ -0.47
CCNC-213ENST00000523541 NUDT3O95989 172 aa12.12□□□□□ -0.47
CCNC-213ENST00000523541 CD300CQ08708 224 aa12.12□□□□□ -0.47
CCNC-213ENST00000523541 CMTM2Q8TAZ6 248 aa12.12□□□□□ -0.47
CCNC-213ENST00000523541 DNAH2Q9P225 4427 aa12.11□□□□□ -0.47
CCNC-213ENST00000523541 BTN1A1Q13410 526 aa12.11□□□□□ -0.47
CCNC-213ENST00000523541 GNPNAT1Q96EK6 184 aaPredicted RBP12.11□□□□□ -0.47
CCNC-213ENST00000523541 TNFSF18Q9UNG2 199 aa12.11□□□□□ -0.47
CCNC-213ENST00000523541 IGHV1OR15-1A0A075B7D0 117 aa12.1□□□□□ -0.47
CCNC-213ENST00000523541 PGPA6NDG6 321 aa12.1□□□□□ -0.47
CCNC-213ENST00000523541 STAG3L2P0CL84 134 aa12.1□□□□□ -0.47
CCNC-213ENST00000523541 STAG3L3P0CL85 134 aa12.1□□□□□ -0.47
CCNC-213ENST00000523541 RAB2AP61019 212 aa12.1□□□□□ -0.47
CCNC-213ENST00000523541 C11orf72Q8NBR9 251 aa12.1□□□□□ -0.47
CCNC-213ENST00000523541 SUN5Q8TC36 379 aa12.1□□□□□ -0.47
CCNC-213ENST00000523541 BORCS7-ASMTA0A0B4J1R7 106 aa12.09□□□□□ -0.47
CCNC-213ENST00000523541 SERTM2A0A1B0GWG4 89 aa12.09□□□□□ -0.47
CCNC-213ENST00000523541 GAGE12BA1L429 117 aa12.09□□□□□ -0.47
CCNC-213ENST00000523541 RGS13O14921 159 aa12.09□□□□□ -0.47
CCNC-213ENST00000523541 GAGE7O76087 117 aa12.09□□□□□ -0.47
CCNC-213ENST00000523541 GAGE12FP0CL80 117 aa12.09□□□□□ -0.47
CCNC-213ENST00000523541 GAGE12GP0CL81 117 aa12.09□□□□□ -0.47
CCNC-213ENST00000523541 GAGE12IP0CL82 117 aa12.09□□□□□ -0.47
CCNC-213ENST00000523541 ATP6V0CP27449 155 aa12.09□□□□□ -0.47
CCNC-213ENST00000523541 CDC34P49427 236 aaPredicted RBP12.09□□□□□ -0.47
CCNC-213ENST00000523541 TCL1AP56279 114 aa12.09□□□□□ -0.47
CCNC-213ENST00000523541 Q5BKY6 102 aa12.09□□□□□ -0.47
CCNC-213ENST00000523541 HSD17B11Q8NBQ5 300 aa12.09□□□□□ -0.47
CCNC-213ENST00000523541 GSN-AS1Q9NRJ2 163 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms