RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 ADAMTSL5Q6ZMM2 481 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 AKAP14Q86UN6 197 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 INO80EQ8NBZ0 244 aaPredicted RBP2.29□□□□□ -2.04
VPS13B-209ENST00000521559 OR51G1Q8NGK1 321 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 OR5C1Q8NGR4 320 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 OR2K2Q8NGT1 345 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 MRAPQ8TCY5 172 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 SCGB1C1Q8TD33 95 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 AQP10Q96PS8 301 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 METTL26Q96S19 204 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 MGST2Q99735 147 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 GINS3Q9BRX5 216 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 RHPN1-AS1Q9BWJ2 59 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 PARD6GQ9BYG4 376 aaPredicted RBP2.29□□□□□ -2.04
VPS13B-209ENST00000521559 SMIM3Q9BZL3 60 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 MFFQ9GZY8 342 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 WFDC1Q9HC57 220 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 DAZ1Q9NQZ3 744 aaKnown RBP2.29□□□□□ -2.04
VPS13B-209ENST00000521559 ANAPC11Q9NYG5 84 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 ZMAT5Q9UDW3 170 aaKnown RBP2.29□□□□□ -2.04
VPS13B-209ENST00000521559 TNFSF18Q9UNG2 199 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 CELSR1Q9NYQ6 3014 aa2.29□□□□□ -2.04
VPS13B-209ENST00000521559 IGHV3OR16-12A0A075B7B8 117 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 IGHV3OR16-8A0A075B7F1 116 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 IGHV3-49A0A0A0MS15 119 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 BORCS7-ASMTA0A0B4J1R7 106 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 A0A0D9SG52 128 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 IGHV7-4-1A0A0J9YVY3 117 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 UBE2L5PA0A1B0GUS4 154 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 FAM168BA1KXE4 195 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 RNF222A6NCQ9 220 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 G3V4G9 280 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 TAAR5O14804 337 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 RTL8CO15255 209 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 ARPC5O15511 151 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 ZNF207O43670 478 aaKnown RBP2.28□□□□□ -2.04
VPS13B-209ENST00000521559 IGLV1-51P01701 117 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 C1QBP02746 253 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 IL4P05112 153 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 CD5P06127 495 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 ORM2P19652 201 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 CXCL2P19875 107 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 FGF7P21781 194 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 S100A7P31151 101 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 RPL29P47914 159 aaKnown RBP2.28□□□□□ -2.04
VPS13B-209ENST00000521559 EIF2B2P49770 351 aaKnown RBP2.28□□□□□ -2.04
VPS13B-209ENST00000521559 EGFEM1PQ0D2K5 195 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 ZNF266Q14584 549 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 ZNF345Q14585 488 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 USF2Q15853 346 aaPredicted RBP2.28□□□□□ -2.04
VPS13B-209ENST00000521559 C1orf194Q5T5A4 169 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 KPRPQ5T749 579 aaPredicted RBP2.28□□□□□ -2.04
VPS13B-209ENST00000521559 MIC13Q5XKP0 118 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 LAMTOR1Q6IAA8 161 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 LCN12Q6JVE5 192 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 S100A7AQ86SG5 101 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 KCNRGQ8N5I3 272 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 ZNF709Q8N972 641 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 BPIFCQ8NFQ6 507 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 OR1L4Q8NGR5 311 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 DYNLRB2Q8TF09 96 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 NARS2Q96I59 477 aaKnown RBP2.28□□□□□ -2.04
VPS13B-209ENST00000521559 HYLS1Q96M11 299 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 ATP5SQ99766 215 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 SHANK2-AS3Q9BTD1 123 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 GGTLC1Q9BX51 225 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 NPCDR1Q9BY65 106 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 WDR61Q9GZS3 305 aaKnown RBP2.28□□□□□ -2.04
VPS13B-209ENST00000521559 VSIRQ9H7M9 311 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 CYTL1Q9NRR1 136 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 KCNIP2Q9NS61 270 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 SLC39A9Q9NUM3 307 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 DOK5Q9P104 306 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 MLXQ9UH92 298 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 RABAC1Q9UI14 185 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 TIMM9Q9Y5J7 89 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 PXMP4Q9Y6I8 212 aa2.28□□□□□ -2.04
VPS13B-209ENST00000521559 ZNF469Q96JG9 3925 aaPredicted RBP2.28□□□□□ -2.04
VPS13B-209ENST00000521559 AKAP9Q99996 3911 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 MAP1AP78559 2803 aaPredicted RBP2.27□□□□□ -2.05
VPS13B-209ENST00000521559 IGHV3OR16-13A0A075B7E8 117 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 IGHV3-74A0A0B4J1X5 117 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 TRAV2A0A0B4J234 112 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 IGHV3-66A0A0C4DH42 116 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 IZUMO1RA6ND01 250 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 HELTA6NFD8 242 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 ZNF98A6NK75 572 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 C17orf112F2Z3M2 114 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 COX7A2P2O60397 106 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 OR5G3P0C626 314 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 ATP6V0CP27449 155 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 CMC4P56277 68 aaPredicted RBP2.27□□□□□ -2.05
VPS13B-209ENST00000521559 B2MP61769 119 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 EIF5AP63241 154 aaKnown RBP2.27□□□□□ -2.05
VPS13B-209ENST00000521559 PAFAH1B2P68402 229 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 GUCA2BQ16661 112 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 LGALSLQ3ZCW2 172 aaPredicted RBP2.27□□□□□ -2.05
VPS13B-209ENST00000521559 C10orf113Q5VZT2 155 aa2.27□□□□□ -2.05
VPS13B-209ENST00000521559 RPL7L1Q6DKI1 246 aaKnown RBP2.27□□□□□ -2.05
VPS13B-209ENST00000521559 PATE2Q6UY27 113 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms