RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 LIFP15018 202 aa3.75□□□□□ -1.81
HMGB1P19-201ENST00000517578 CKS2P33552 79 aa3.75□□□□□ -1.81
HMGB1P19-201ENST00000517578 DLX1P56177 255 aa3.75□□□□□ -1.81
HMGB1P19-201ENST00000517578 RPL18AQ02543 176 aaKnown RBP3.75□□□□□ -1.81
HMGB1P19-201ENST00000517578 DEFB134Q4QY38 66 aa3.75□□□□□ -1.81
HMGB1P19-201ENST00000517578 FAM104BQ5XKR9 115 aa3.75□□□□□ -1.81
HMGB1P19-201ENST00000517578 ZFP2Q6ZN57 461 aa3.75□□□□□ -1.81
HMGB1P19-201ENST00000517578 C11orf53Q8IXP5 236 aa3.75□□□□□ -1.81
HMGB1P19-201ENST00000517578 MBD3L2Q8NHZ7 208 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P19-201ENST00000517578 ZNF799Q96GE5 643 aa3.75□□□□□ -1.81
HMGB1P19-201ENST00000517578 PAXXQ9BUH6 204 aa3.75□□□□□ -1.81
HMGB1P19-201ENST00000517578 DPH3P1Q9H4G8 78 aa3.75□□□□□ -1.81
HMGB1P19-201ENST00000517578 COL4A2P08572 1712 aa3.75□□□□□ -1.81
HMGB1P19-201ENST00000517578 IGKV2D-26A0A0A0MRZ7 120 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 WI2-2373I1.2A0A1W2PRP0 233 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 hADV29S1A0JD25 119 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 EPM2AB3EWF7 344 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 UPK2O00526 184 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 NDUFC1O43677 76 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 BUB3O43684 328 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 CISD3P0C7P0 127 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 INAFM2P0DMQ5 153 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 SLC25A16P16260 332 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 CCL11P51671 97 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 ZNF137PP52743 207 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 ZNF138P52744 262 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 HIST1H4AP62805 103 aaKnown RBP3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 IGLV3-21P80748 117 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 PLGLAQ15195 96 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 PIGYQ3MUY2 71 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 CLLU1OSQ5K130 101 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 ZNF497Q6ZNH5 498 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 ZNF329Q86UD4 541 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 Q8IYB0 196 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 SLC25A45Q8N413 288 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 Q8N8P6 123 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 TSACCQ96A04 125 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 COX14Q96I36 57 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 LYZL4Q96KX0 146 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 C2orf48Q96LS8 159 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 ZNF714Q96N38 554 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 METTL26Q96S19 204 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 FOXC2Q99958 501 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 OTORQ9NRC9 128 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 PTPRBP23467 1997 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 MPDZO75970 2070 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 PTPRSQ13332 1948 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 ADAMTS9Q9P2N4 1935 aa3.74□□□□□ -1.81
HMGB1P19-201ENST00000517578 KIAA1549LQ6ZVL6 1849 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 A0A096LNJ9 63 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 A0A0U1RQV1 116 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 C4orf51C9J302 202 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 ADM5C9JUS6 153 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 PRSS46E5RG02 174 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 F8VRH5 84 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 C16orf97H3BN30 126 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 LY6LH3BQJ8 138 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 CCL16O15467 120 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 COX7A2P2O60397 106 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 IGHG2P01859 326 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 CT62P0C5K7 136 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 DUTP33316 252 aaKnown RBP3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 SYNJ2BPP57105 145 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 PAX8Q06710 450 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 S100A7L2Q5SY68 101 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 MIR17HGQ75NE6 70 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 RNF144BQ7Z419 303 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 VN1R4Q7Z5H5 301 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 MDP1Q86V88 176 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 STHQ8IWL8 128 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 EXOC3-AS1Q8N2X6 119 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 RNF182Q8N6D2 247 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 DAND5Q8N907 189 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 NFAM1Q8NET5 270 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 SSMEM1Q8WWF3 244 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 VSIG2Q96IQ7 327 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 FAM19A4Q96LR4 140 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 SRXN1Q9BYN0 137 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 KLK15Q9H2R5 256 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 SHANK1Q9Y566 2161 aa3.73□□□□□ -1.81
HMGB1P19-201ENST00000517578 TRAV40A0A0B4J280 105 aa3.72□□□□□ -1.81
HMGB1P19-201ENST00000517578 IGKV1-6A0A0C4DH72 117 aa3.72□□□□□ -1.81
HMGB1P19-201ENST00000517578 TEX49A0A1B0GTD5 131 aa3.72□□□□□ -1.81
HMGB1P19-201ENST00000517578 LOC389332A0A1B0GUA5 103 aa3.72□□□□□ -1.81
HMGB1P19-201ENST00000517578 C15orf61A6NNL5 157 aa3.72□□□□□ -1.81
HMGB1P19-201ENST00000517578 LINC00473A8K010 186 aa3.72□□□□□ -1.81
HMGB1P19-201ENST00000517578 ZNF815PA8K554 130 aa3.72□□□□□ -1.81
HMGB1P19-201ENST00000517578 D6R8Y8 96 aa3.72□□□□□ -1.81
HMGB1P19-201ENST00000517578 TMEM178BH3BS89 294 aa3.72□□□□□ -1.81
HMGB1P19-201ENST00000517578 MRPS12O15235 138 aaKnown RBP3.72□□□□□ -1.81
HMGB1P19-201ENST00000517578 FCGR3BO75015 233 aa3.72□□□□□ -1.81
HMGB1P19-201ENST00000517578 GRPP07492 148 aa3.72□□□□□ -1.81
HMGB1P19-201ENST00000517578 LOXP28300 417 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P19-201ENST00000517578 CDAP32320 146 aa3.72□□□□□ -1.81
HMGB1P19-201ENST00000517578 NBL1P41271 181 aa3.72□□□□□ -1.81
HMGB1P19-201ENST00000517578 EFNA4P52798 201 aa3.72□□□□□ -1.81
HMGB1P19-201ENST00000517578 ZNF816Q0VGE8 651 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P19-201ENST00000517578 KRTAP27-1Q3LI81 207 aa3.72□□□□□ -1.81
HMGB1P19-201ENST00000517578 C10orf128Q5T292 105 aa3.72□□□□□ -1.81
HMGB1P19-201ENST00000517578 C10orf113Q5VZT2 155 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms