RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 INSL4Q14641 139 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 MPV17LQ2QL34 196 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 MORN5Q5VZ52 161 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 PRR15Q8IV56 129 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 WFDC11Q8NEX6 87 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 SGMS2Q8NHU3 365 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 RNASE6Q93091 150 aaKnown RBP3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 Q96M85 177 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 C11orf21Q9P2W6 132 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 ANKRD17O75179 2603 aaKnown RBP3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 TRBV20-1A0A075B6N2 111 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 IGKV3D-15A0A087WSY6 115 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 FAM181BA6NEQ2 426 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 C12orf77C9JDV5 145 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 M0R1X1 148 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 JTBO76095 146 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 MT-ATP8P03928 68 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 HSPB1P04792 205 aaKnown RBP3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 FABP2P12104 132 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 MDKP21741 143 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 CRYBB3P26998 211 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 HMGA2P52926 109 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 HOXA4Q00056 320 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 RPL7L1Q6DKI1 246 aaKnown RBP3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 OSR1Q8TAX0 266 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 PLA2G12AQ9BZM1 189 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 PARLQ9H300 379 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 TRAV8-1A0A0A6YYK1 113 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 K7EP34 96 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 ISLRO14498 428 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 NDUFB2O95178 105 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 NCR2O95944 276 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 NAPSAO96009 420 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 SEC11BP0C7V7 166 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 FXYD6P3P58550 94 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 LMO4P61968 165 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 RPS11P62280 158 aaKnown RBP eCLIP3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 SSBP1Q04837 148 aaKnown RBP3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 ERCC8Q13216 396 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 FHL1Q13642 323 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 RBMY1FQ15415 496 aaKnown RBP3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 C9orf153Q5TBE3 101 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 FAM57BQ71RH2 274 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 PRNTQ86SH4 94 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 MBD6Q96DN6 1003 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 C18orf12Q96KH6 178 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 RNF126Q9BV68 326 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 LINC00527Q9UJ94 153 aa3.87□□□□□ -1.79
TRAPPC11-208ENST00000511955 OTOGQ6ZRI0 2925 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 IGKV1D-43A0A0B4J1Z2 117 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 CD300LBA8K4G0 201 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 A8MWV9 139 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 IGHG1P01857 330 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 IGHA1P01876 353 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 GYPBP06028 91 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 P0DMU3 169 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 FAM231AP0DMU4 169 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 FAM231CP0DMU5 169 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 EGR2P11161 476 aaPredicted RBP3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 VDAC2P45880 294 aaPredicted RBP3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 KRTAP10-9P60411 292 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 GNB2P62879 340 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 C6orf99Q4VX62 202 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 ZNF322Q6U7Q0 402 aaPredicted RBP3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 LINC00596Q86U02 117 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 C6orf223Q8N319 242 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 LINC00337Q8N6G1 96 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 OR10J6PQ8NGY7 276 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 CHCHD10Q8WYQ3 142 aaPredicted RBP3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 S100A16Q96FQ6 103 aaKnown RBP3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 ZNF799Q96GE5 643 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 RNF185Q96GF1 192 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 C17orf77Q96MU5 243 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 SVEP1Q4LDE5 3571 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 MYO9AB2RTY4 2548 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 PDZD2O15018 2839 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 CADP27708 2225 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 LOC389332A0A1B0GUA5 103 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 ZNF503-AS2A6NEH8 195 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 ATP6V0E1O15342 81 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 RPS27P42677 84 aaKnown RBP3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 MP68P56378 58 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 PRR3P79522 188 aaKnown RBP3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 SLC25A34Q6PIV7 304 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 LINC00305Q7Z4B0 112 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 TRAPPC6BQ86SZ2 158 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 RFLNBQ8N5W9 214 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 TM2D3Q9BRN9 247 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 C21orf62Q9NYP8 219 aa3.86□□□□□ -1.79
TRAPPC11-208ENST00000511955 CACNA1DQ01668 2161 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 HCFC1P51610 2035 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 PGPA6NDG6 321 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 CYSRT1A8MQ03 144 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 M0R381 172 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 SFT2D2O95562 160 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 CYB5AP00167 134 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 TCRAP04437 139 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 PSMB3P49720 205 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 ZNF90Q03938 601 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 ATP5G2Q06055 141 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms