RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 SRSF2Q01130 221 aaKnown RBP6.83□□□□□ -1.32
NR1I3-216ENST00000502848 DEFB114Q30KQ6 69 aa6.83□□□□□ -1.32
NR1I3-216ENST00000502848 ADAMTSL5Q6ZMM2 481 aa6.83□□□□□ -1.32
NR1I3-216ENST00000502848 RBPMS2Q6ZRY4 209 aaKnown RBP6.83□□□□□ -1.32
NR1I3-216ENST00000502848 CBLN2Q8IUK8 224 aa6.83□□□□□ -1.32
NR1I3-216ENST00000502848 DYNLRB2Q8TF09 96 aa6.83□□□□□ -1.32
NR1I3-216ENST00000502848 LINC00479Q96M42 142 aa6.83□□□□□ -1.32
NR1I3-216ENST00000502848 CLUHP3Q96NS8 147 aa6.83□□□□□ -1.32
NR1I3-216ENST00000502848 PRR25Q96S07 402 aa6.83□□□□□ -1.32
NR1I3-216ENST00000502848 PYGO2Q9BRQ0 406 aa6.83□□□□□ -1.32
NR1I3-216ENST00000502848 GFRA4Q9GZZ7 299 aa6.83□□□□□ -1.32
NR1I3-216ENST00000502848 SAV1Q9H4B6 383 aaPredicted RBP6.83□□□□□ -1.32
NR1I3-216ENST00000502848 RPH3ALQ9UNE2 315 aa6.83□□□□□ -1.32
NR1I3-216ENST00000502848 A0A1W2PRX2 142 aa6.82□□□□□ -1.32
NR1I3-216ENST00000502848 PGPEP1LA6NFU8 196 aa6.82□□□□□ -1.32
NR1I3-216ENST00000502848 A8MTW9 85 aa6.82□□□□□ -1.32
NR1I3-216ENST00000502848 PFN1P07737 140 aaKnown RBP6.82□□□□□ -1.32
NR1I3-216ENST00000502848 MGST1P10620 155 aaKnown RBP6.82□□□□□ -1.32
NR1I3-216ENST00000502848 ERVFC1-1P60608 527 aa6.82□□□□□ -1.32
NR1I3-216ENST00000502848 SMUG1Q53HV7 270 aa6.82□□□□□ -1.32
NR1I3-216ENST00000502848 Q6AWC8 147 aa6.82□□□□□ -1.32
NR1I3-216ENST00000502848 TMEM88Q6PEY1 159 aa6.82□□□□□ -1.32
NR1I3-216ENST00000502848 PRNTQ86SH4 94 aa6.82□□□□□ -1.32
NR1I3-216ENST00000502848 APRG1Q8IVJ8 170 aa6.82□□□□□ -1.32
NR1I3-216ENST00000502848 GBGT1Q8N5D6 347 aa6.82□□□□□ -1.32
NR1I3-216ENST00000502848 RNF182Q8N6D2 247 aa6.82□□□□□ -1.32
NR1I3-216ENST00000502848 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.82□□□□□ -1.32
NR1I3-216ENST00000502848 OR8A1Q8NGG7 326 aa6.82□□□□□ -1.32
NR1I3-216ENST00000502848 DAZAP1Q96EP5 407 aaKnown RBP6.82□□□□□ -1.32
NR1I3-216ENST00000502848 IL36BQ9NZH7 164 aa6.82□□□□□ -1.32
NR1I3-216ENST00000502848 V9GYV3 84 aa6.82□□□□□ -1.32
NR1I3-216ENST00000502848 IGKV2-40A0A087WW87 121 aaPredicted RBP6.81□□□□□ -1.32
NR1I3-216ENST00000502848 TRAV8-1A0A0A6YYK1 113 aa6.81□□□□□ -1.32
NR1I3-216ENST00000502848 XKRY2A2RUG3 117 aa6.81□□□□□ -1.32
NR1I3-216ENST00000502848 A8MWL6 223 aa6.81□□□□□ -1.32
NR1I3-216ENST00000502848 DUSP14O95147 198 aaKnown RBP6.81□□□□□ -1.32
NR1I3-216ENST00000502848 IGKV2D-40P01614 121 aaPredicted RBP6.81□□□□□ -1.32
NR1I3-216ENST00000502848 P01737 135 aa6.81□□□□□ -1.32
NR1I3-216ENST00000502848 TYMSP04818 313 aa6.81□□□□□ -1.32
NR1I3-216ENST00000502848 CXCL1P09341 107 aa6.81□□□□□ -1.32
NR1I3-216ENST00000502848 CRISP2P16562 243 aa6.81□□□□□ -1.32
NR1I3-216ENST00000502848 KRTAP10-3P60369 221 aa6.81□□□□□ -1.32
NR1I3-216ENST00000502848 RPS20P60866 119 aaKnown RBP6.81□□□□□ -1.32
NR1I3-216ENST00000502848 ELOBQ15370 118 aa6.81□□□□□ -1.32
NR1I3-216ENST00000502848 COX19Q49B96 90 aa6.81□□□□□ -1.32
NR1I3-216ENST00000502848 FAM162BQ5T6X4 162 aa6.81□□□□□ -1.32
NR1I3-216ENST00000502848 FOXI2Q6ZQN5 318 aa6.81□□□□□ -1.32
NR1I3-216ENST00000502848 LINC00482Q8N8I6 264 aa6.81□□□□□ -1.32
NR1I3-216ENST00000502848 FAM19A4Q96LR4 140 aa6.81□□□□□ -1.32
NR1I3-216ENST00000502848 ASCL2Q99929 193 aa6.81□□□□□ -1.32
NR1I3-216ENST00000502848 A0A0J9YX75 114 aa6.8□□□□□ -1.32
NR1I3-216ENST00000502848 SMIM27A0A1W2PRY6 76 aa6.8□□□□□ -1.32
NR1I3-216ENST00000502848 COLCA2A8K830 154 aa6.8□□□□□ -1.32
NR1I3-216ENST00000502848 ZNF705FA8MVS1 300 aaPredicted RBP6.8□□□□□ -1.32
NR1I3-216ENST00000502848 GATCO43716 136 aaKnown RBP6.8□□□□□ -1.32
NR1I3-216ENST00000502848 IGLV1-51P01701 117 aa6.8□□□□□ -1.32
NR1I3-216ENST00000502848 PF4P02776 101 aa6.8□□□□□ -1.32
NR1I3-216ENST00000502848 HLA-DMBP28068 263 aa6.8□□□□□ -1.32
NR1I3-216ENST00000502848 FOXA3P55318 350 aaPredicted RBP6.8□□□□□ -1.32
NR1I3-216ENST00000502848 HIST1H1AQ02539 215 aaPredicted RBP6.8□□□□□ -1.32
NR1I3-216ENST00000502848 EBLN2Q6P2I7 272 aa6.8□□□□□ -1.32
NR1I3-216ENST00000502848 RASL11AQ6T310 242 aa6.8□□□□□ -1.32
NR1I3-216ENST00000502848 TMEM61Q8N0U2 210 aa6.8□□□□□ -1.32
NR1I3-216ENST00000502848 C11orf44Q8N8P7 122 aa6.8□□□□□ -1.32
NR1I3-216ENST00000502848 NUDT10Q8NFP7 164 aa6.8□□□□□ -1.32
NR1I3-216ENST00000502848 TSKUQ8WUA8 353 aa6.8□□□□□ -1.32
NR1I3-216ENST00000502848 NUDT11Q96G61 164 aa6.8□□□□□ -1.32
NR1I3-216ENST00000502848 ZC2HC1AQ96GY0 325 aa6.8□□□□□ -1.32
NR1I3-216ENST00000502848 C20orf173Q96LM9 149 aa6.8□□□□□ -1.32
NR1I3-216ENST00000502848 VGLL1Q99990 258 aa6.8□□□□□ -1.32
NR1I3-216ENST00000502848 MCRIP2Q9BUT9 160 aaKnown RBP6.8□□□□□ -1.32
NR1I3-216ENST00000502848 AGPAT4-IT1Q9H0P7 198 aa6.8□□□□□ -1.32
NR1I3-216ENST00000502848 RPP21Q9H633 154 aaKnown RBP6.8□□□□□ -1.32
NR1I3-216ENST00000502848 CYSRT1A8MQ03 144 aa6.79□□□□□ -1.32
NR1I3-216ENST00000502848 FABP5P3A8MUU1 101 aa6.79□□□□□ -1.32
NR1I3-216ENST00000502848 ZNF705GA8MUZ8 300 aaPredicted RBP6.79□□□□□ -1.32
NR1I3-216ENST00000502848 PRAC2D3DTV9 90 aa6.79□□□□□ -1.32
NR1I3-216ENST00000502848 RAB5AP20339 215 aa6.79□□□□□ -1.32
NR1I3-216ENST00000502848 EDN2P20800 178 aa6.79□□□□□ -1.32
NR1I3-216ENST00000502848 TSPOP30536 169 aa6.79□□□□□ -1.32
NR1I3-216ENST00000502848 FAM3BP58499 235 aaPredicted RBP6.79□□□□□ -1.32
NR1I3-216ENST00000502848 OR5I1Q13606 314 aa6.79□□□□□ -1.32
NR1I3-216ENST00000502848 NSUN5P1Q3KNT7 163 aa6.79□□□□□ -1.32
NR1I3-216ENST00000502848 ATP5L2Q7Z4Y8 100 aa6.79□□□□□ -1.32
NR1I3-216ENST00000502848 TMEM158Q8WZ71 300 aa6.79□□□□□ -1.32
NR1I3-216ENST00000502848 DUX3Q96PT4 197 aa6.79□□□□□ -1.32
NR1I3-216ENST00000502848 ZNF747Q9BV97 191 aa6.79□□□□□ -1.32
NR1I3-216ENST00000502848 GPR61Q9BZJ8 451 aa6.79□□□□□ -1.32
NR1I3-216ENST00000502848 RNASE7Q9H1E1 156 aaKnown RBP6.79□□□□□ -1.32
NR1I3-216ENST00000502848 C2CD3Q4AC94 2353 aa6.79□□□□□ -1.32
NR1I3-216ENST00000502848 A0A1B0GW15 77 aa6.78□□□□□ -1.32
NR1I3-216ENST00000502848 WIPF1O43516 503 aa6.78□□□□□ -1.32
NR1I3-216ENST00000502848 ZNF688P0C7X2 276 aa6.78□□□□□ -1.32
NR1I3-216ENST00000502848 HLA-DRB4P13762 266 aa6.78□□□□□ -1.32
NR1I3-216ENST00000502848 LEPP41159 167 aa6.78□□□□□ -1.32
NR1I3-216ENST00000502848 CD300EQ496F6 205 aaPredicted RBP6.78□□□□□ -1.32
NR1I3-216ENST00000502848 PSMG4Q5JS54 123 aa6.78□□□□□ -1.32
NR1I3-216ENST00000502848 IGFL4Q6B9Z1 124 aa6.78□□□□□ -1.32
NR1I3-216ENST00000502848 PRR27Q6MZM9 219 aa6.78□□□□□ -1.32
NR1I3-216ENST00000502848 SHISA2Q6UWI4 295 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 742.2 ms