RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 IGKV2D-40P01614 121 aaPredicted RBP7.81□□□□□ -1.16
RAB11FIP3-210ENST00000487899 CRISP2P16562 243 aa7.81□□□□□ -1.16
RAB11FIP3-210ENST00000487899 CD300CQ08708 224 aa7.81□□□□□ -1.16
RAB11FIP3-210ENST00000487899 BLNKQ8WV28 456 aa7.81□□□□□ -1.16
RAB11FIP3-210ENST00000487899 FXYD5Q96DB9 178 aa7.81□□□□□ -1.16
RAB11FIP3-210ENST00000487899 PHYHIPLQ96FC7 376 aa7.81□□□□□ -1.16
RAB11FIP3-210ENST00000487899 PYGO2Q9BRQ0 406 aa7.81□□□□□ -1.16
RAB11FIP3-210ENST00000487899 MARVELD1Q9BSK0 173 aa7.81□□□□□ -1.16
RAB11FIP3-210ENST00000487899 TMPRSS5Q9H3S3 457 aa7.81□□□□□ -1.16
RAB11FIP3-210ENST00000487899 LINC00588Q9Y4M8 146 aa7.81□□□□□ -1.16
RAB11FIP3-210ENST00000487899 TRAV26-1A0A087WT03 109 aa7.8□□□□□ -1.16
RAB11FIP3-210ENST00000487899 GAGE12BA1L429 117 aa7.8□□□□□ -1.16
RAB11FIP3-210ENST00000487899 INMT-MINDY4F8WBC2 141 aa7.8□□□□□ -1.16
RAB11FIP3-210ENST00000487899 ZNF324O75467 553 aaPredicted RBP7.8□□□□□ -1.16
RAB11FIP3-210ENST00000487899 GAGE7O76087 117 aa7.8□□□□□ -1.16
RAB11FIP3-210ENST00000487899 SLC25A5P05141 298 aaKnown RBP7.8□□□□□ -1.16
RAB11FIP3-210ENST00000487899 GAGE12FP0CL80 117 aa7.8□□□□□ -1.16
RAB11FIP3-210ENST00000487899 GAGE12GP0CL81 117 aa7.8□□□□□ -1.16
RAB11FIP3-210ENST00000487899 GAGE12IP0CL82 117 aa7.8□□□□□ -1.16
RAB11FIP3-210ENST00000487899 ICAM4Q14773 271 aa7.8□□□□□ -1.16
RAB11FIP3-210ENST00000487899 Q6ZQT7 251 aa7.8□□□□□ -1.16
RAB11FIP3-210ENST00000487899 C9orf47Q6ZRZ4 202 aa7.8□□□□□ -1.16
RAB11FIP3-210ENST00000487899 Q6ZTI0 123 aa7.8□□□□□ -1.16
RAB11FIP3-210ENST00000487899 ZFAND2AQ8N6M9 145 aa7.8□□□□□ -1.16
RAB11FIP3-210ENST00000487899 PPP1R1CQ8WVI7 109 aa7.8□□□□□ -1.16
RAB11FIP3-210ENST00000487899 ZNF503Q96F45 646 aa7.8□□□□□ -1.16
RAB11FIP3-210ENST00000487899 ATG101Q9BSB4 218 aa7.8□□□□□ -1.16
RAB11FIP3-210ENST00000487899 MRPL32Q9BYC8 188 aaKnown RBP7.8□□□□□ -1.16
RAB11FIP3-210ENST00000487899 KRTAP1-5Q9BYS1 174 aa7.8□□□□□ -1.16
RAB11FIP3-210ENST00000487899 SLC25A31Q9H0C2 315 aa7.8□□□□□ -1.16
RAB11FIP3-210ENST00000487899 AGPAT4-IT1Q9H0P7 198 aa7.8□□□□□ -1.16
RAB11FIP3-210ENST00000487899 KCNIP2Q9NS61 270 aa7.8□□□□□ -1.16
RAB11FIP3-210ENST00000487899 PRELID1Q9Y255 219 aa7.8□□□□□ -1.16
RAB11FIP3-210ENST00000487899 NBDYA0A0U1RRE5 68 aa7.79□□□□□ -1.16
RAB11FIP3-210ENST00000487899 SNURFLB1AK76 121 aa7.79□□□□□ -1.16
RAB11FIP3-210ENST00000487899 RLN2P04090 185 aa7.79□□□□□ -1.16
RAB11FIP3-210ENST00000487899 OR10J4P0C629 311 aa7.79□□□□□ -1.16
RAB11FIP3-210ENST00000487899 DAZ2Q13117 558 aaKnown RBP7.79□□□□□ -1.16
RAB11FIP3-210ENST00000487899 C1orf134Q5TEV5 83 aa7.79□□□□□ -1.16
RAB11FIP3-210ENST00000487899 FAM122CQ6P4D5 195 aa7.79□□□□□ -1.16
RAB11FIP3-210ENST00000487899 Q8TAT8 98 aa7.79□□□□□ -1.16
RAB11FIP3-210ENST00000487899 ATP5SQ99766 215 aa7.79□□□□□ -1.16
RAB11FIP3-210ENST00000487899 VGLL1Q99990 258 aa7.79□□□□□ -1.16
RAB11FIP3-210ENST00000487899 LINC00467Q9BRT7 94 aa7.79□□□□□ -1.16
RAB11FIP3-210ENST00000487899 FUT9Q9Y231 359 aa7.79□□□□□ -1.16
RAB11FIP3-210ENST00000487899 HSPB11Q9Y547 144 aa7.79□□□□□ -1.16
RAB11FIP3-210ENST00000487899 TIMM9Q9Y5J7 89 aa7.79□□□□□ -1.16
RAB11FIP3-210ENST00000487899 MPC2O95563 127 aa7.78□□□□□ -1.16
RAB11FIP3-210ENST00000487899 MED14OSP0DP75 135 aa7.78□□□□□ -1.16
RAB11FIP3-210ENST00000487899 M6PRP20645 277 aa7.78□□□□□ -1.16
RAB11FIP3-210ENST00000487899 SSX7Q7RTT5 188 aa7.78□□□□□ -1.16
RAB11FIP3-210ENST00000487899 ZNF575Q86XF7 245 aa7.78□□□□□ -1.16
RAB11FIP3-210ENST00000487899 CCDC28AQ8IWP9 274 aa7.78□□□□□ -1.16
RAB11FIP3-210ENST00000487899 ZNF680Q8NEM1 530 aa7.78□□□□□ -1.16
RAB11FIP3-210ENST00000487899 RXFP4Q8TDU9 374 aa7.78□□□□□ -1.16
RAB11FIP3-210ENST00000487899 C18orf15Q96N68 181 aa7.78□□□□□ -1.16
RAB11FIP3-210ENST00000487899 AAMDCQ9H7C9 122 aa7.78□□□□□ -1.16
RAB11FIP3-210ENST00000487899 GSN-AS1Q9NRJ2 163 aa7.78□□□□□ -1.16
RAB11FIP3-210ENST00000487899 A0A0J9YY99 117 aa7.77□□□□□ -1.17
RAB11FIP3-210ENST00000487899 NBEAP1P0C6P0 100 aa7.77□□□□□ -1.17
RAB11FIP3-210ENST00000487899 CCL18P55774 89 aa7.77□□□□□ -1.17
RAB11FIP3-210ENST00000487899 TCL1AP56279 114 aa7.77□□□□□ -1.17
RAB11FIP3-210ENST00000487899 CYCSP99999 105 aaKnown RBP7.77□□□□□ -1.17
RAB11FIP3-210ENST00000487899 TNP2Q05952 138 aa7.77□□□□□ -1.17
RAB11FIP3-210ENST00000487899 OR5I1Q13606 314 aa7.77□□□□□ -1.17
RAB11FIP3-210ENST00000487899 ANXA2RQ3ZCQ2 193 aa7.77□□□□□ -1.17
RAB11FIP3-210ENST00000487899 SOHLH1Q5JUK2 328 aa7.77□□□□□ -1.17
RAB11FIP3-210ENST00000487899 EIF4E3Q8N5X7 224 aaKnown RBP7.77□□□□□ -1.17
RAB11FIP3-210ENST00000487899 GNPNAT1Q96EK6 184 aaPredicted RBP7.77□□□□□ -1.17
RAB11FIP3-210ENST00000487899 LINC00477Q96M19 166 aa7.77□□□□□ -1.17
RAB11FIP3-210ENST00000487899 PAXXQ9BUH6 204 aa7.77□□□□□ -1.17
RAB11FIP3-210ENST00000487899 OR51M1Q9H341 326 aa7.77□□□□□ -1.17
RAB11FIP3-210ENST00000487899 ZNF492Q9P255 531 aa7.77□□□□□ -1.17
RAB11FIP3-210ENST00000487899 MBD2Q9UBB5 411 aa7.77□□□□□ -1.17
RAB11FIP3-210ENST00000487899 H3BNG1 76 aa7.76□□□□□ -1.17
RAB11FIP3-210ENST00000487899 OR7C2O60412 319 aa7.76□□□□□ -1.17
RAB11FIP3-210ENST00000487899 EIF3GO75821 320 aaKnown RBP eCLIP7.76□□□□□ -1.17
RAB11FIP3-210ENST00000487899 NMBP08949 121 aa7.76□□□□□ -1.17
RAB11FIP3-210ENST00000487899 PET100P0DJ07 73 aa7.76□□□□□ -1.17
RAB11FIP3-210ENST00000487899 RNASE4P34096 147 aaKnown RBP7.76□□□□□ -1.17
RAB11FIP3-210ENST00000487899 UBE2L3P68036 154 aaKnown RBP7.76□□□□□ -1.17
RAB11FIP3-210ENST00000487899 IBA57Q5T440 356 aaKnown RBP7.76□□□□□ -1.17
RAB11FIP3-210ENST00000487899 TMEM78Q5T7P6 136 aa7.76□□□□□ -1.17
RAB11FIP3-210ENST00000487899 C6orf223Q8N319 242 aa7.76□□□□□ -1.17
RAB11FIP3-210ENST00000487899 VSIG2Q96IQ7 327 aa7.76□□□□□ -1.17
RAB11FIP3-210ENST00000487899 UPK3BQ9BT76 320 aa7.76□□□□□ -1.17
RAB11FIP3-210ENST00000487899 TP53TG3Q9ULZ0 132 aa7.76□□□□□ -1.17
RAB11FIP3-210ENST00000487899 KLF12Q9Y4X4 402 aa7.76□□□□□ -1.17
RAB11FIP3-210ENST00000487899 TRBV7-9A0A0J9YWB2 115 aa7.75□□□□□ -1.17
RAB11FIP3-210ENST00000487899 C17orf112F2Z3M2 114 aa7.75□□□□□ -1.17
RAB11FIP3-210ENST00000487899 SSNA1O43805 119 aa7.75□□□□□ -1.17
RAB11FIP3-210ENST00000487899 SPINK4O60575 86 aa7.75□□□□□ -1.17
RAB11FIP3-210ENST00000487899 GPX1P07203 203 aa7.75□□□□□ -1.17
RAB11FIP3-210ENST00000487899 ZNF138P52744 262 aa7.75□□□□□ -1.17
RAB11FIP3-210ENST00000487899 KHDC3LQ587J8 217 aa7.75□□□□□ -1.17
RAB11FIP3-210ENST00000487899 FFAR4Q5NUL3 377 aa7.75□□□□□ -1.17
RAB11FIP3-210ENST00000487899 SMIM3Q9BZL3 60 aa7.75□□□□□ -1.17
RAB11FIP3-210ENST00000487899 Q9H3A6 140 aa7.75□□□□□ -1.17
RAB11FIP3-210ENST00000487899 WFDC1Q9HC57 220 aa7.75□□□□□ -1.17
RAB11FIP3-210ENST00000487899 IGHV1OR15-1A0A075B7D0 117 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms