RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 COX7A2P2O60397 106 aa5.06□□□□□ -1.6
PDPN-205ENST00000487038 ZNF253O75346 499 aa5.06□□□□□ -1.6
PDPN-205ENST00000487038 SNRPCP09234 159 aaKnown RBP5.06□□□□□ -1.6
PDPN-205ENST00000487038 IGLC2P0DOY2 106 aa5.06□□□□□ -1.6
PDPN-205ENST00000487038 RNASE4P34096 147 aaKnown RBP5.06□□□□□ -1.6
PDPN-205ENST00000487038 ZNF846Q147U1 533 aa5.06□□□□□ -1.6
PDPN-205ENST00000487038 OR10G4Q8NGN3 311 aa5.06□□□□□ -1.6
PDPN-205ENST00000487038 CIRBP-AS1Q8TBR5 109 aa5.06□□□□□ -1.6
PDPN-205ENST00000487038 YIPF6Q96EC8 236 aa5.06□□□□□ -1.6
PDPN-205ENST00000487038 LINC00477Q96M19 166 aa5.06□□□□□ -1.6
PDPN-205ENST00000487038 SRRQ9GZT4 340 aa5.06□□□□□ -1.6
PDPN-205ENST00000487038 COX11Q9Y6N1 276 aa5.06□□□□□ -1.6
PDPN-205ENST00000487038 TRAV8-3A0A0A6YYJ7 113 aa5.05□□□□□ -1.6
PDPN-205ENST00000487038 RBFOX3A6NFN3 312 aa5.05□□□□□ -1.6
PDPN-205ENST00000487038 FNDC10F2Z333 226 aa5.05□□□□□ -1.6
PDPN-205ENST00000487038 H3BTX0 84 aa5.05□□□□□ -1.6
PDPN-205ENST00000487038 IGLV2-11P01706 119 aa5.05□□□□□ -1.6
PDPN-205ENST00000487038 IGHV3-30P01768 117 aa5.05□□□□□ -1.6
PDPN-205ENST00000487038 IGHV3-33P01772 117 aa5.05□□□□□ -1.6
PDPN-205ENST00000487038 NMBP08949 121 aa5.05□□□□□ -1.6
PDPN-205ENST00000487038 SFTA3P0C7M3 94 aa5.05□□□□□ -1.6
PDPN-205ENST00000487038 IGHV3-30-3P0DP02 117 aa5.05□□□□□ -1.6
PDPN-205ENST00000487038 IGHV3-30-5P0DP03 117 aa5.05□□□□□ -1.6
PDPN-205ENST00000487038 NCS1P62166 190 aa5.05□□□□□ -1.6
PDPN-205ENST00000487038 POLR2GP62487 172 aaKnown RBP eCLIP5.05□□□□□ -1.6
PDPN-205ENST00000487038 CD300CQ08708 224 aa5.05□□□□□ -1.6
PDPN-205ENST00000487038 SLC38A11Q08AI6 406 aa5.05□□□□□ -1.6
PDPN-205ENST00000487038 OPCMLQ14982 345 aa5.05□□□□□ -1.6
PDPN-205ENST00000487038 TOR2AQ5JU69 321 aa5.05□□□□□ -1.6
PDPN-205ENST00000487038 TMEM78Q5T7P6 136 aa5.05□□□□□ -1.6
PDPN-205ENST00000487038 PATE2Q6UY27 113 aa5.05□□□□□ -1.6
PDPN-205ENST00000487038 OR10P1Q8NGE3 313 aa5.05□□□□□ -1.6
PDPN-205ENST00000487038 SMIM4Q8WVI0 70 aa5.05□□□□□ -1.6
PDPN-205ENST00000487038 SAT2Q96F10 170 aaPredicted RBP5.05□□□□□ -1.6
PDPN-205ENST00000487038 ZNF479Q96JC4 524 aa5.05□□□□□ -1.6
PDPN-205ENST00000487038 TP53TG3Q9ULZ0 132 aa5.05□□□□□ -1.6
PDPN-205ENST00000487038 PRELID1Q9Y255 219 aa5.05□□□□□ -1.6
PDPN-205ENST00000487038 TRAV4A0A0B4J268 109 aa5.04□□□□□ -1.6
PDPN-205ENST00000487038 ANKRD65E5RJM6 399 aa5.04□□□□□ -1.6
PDPN-205ENST00000487038 LECT2O14960 151 aa5.04□□□□□ -1.6
PDPN-205ENST00000487038 PFN1P07737 140 aaKnown RBP5.04□□□□□ -1.6
PDPN-205ENST00000487038 HIST1H1EP10412 219 aaKnown RBP5.04□□□□□ -1.6
PDPN-205ENST00000487038 CRISP2P16562 243 aa5.04□□□□□ -1.6
PDPN-205ENST00000487038 VBP1P61758 197 aa5.04□□□□□ -1.6
PDPN-205ENST00000487038 RRAS2P62070 204 aaPredicted RBP5.04□□□□□ -1.6
PDPN-205ENST00000487038 WFDC2Q14508 124 aa5.04□□□□□ -1.6
PDPN-205ENST00000487038 TMEM128Q5BJH2 165 aa5.04□□□□□ -1.6
PDPN-205ENST00000487038 C10orf113Q5VZT2 155 aa5.04□□□□□ -1.6
PDPN-205ENST00000487038 Q6ZRG5 221 aa5.04□□□□□ -1.6
PDPN-205ENST00000487038 ATP6V0E2Q8NHE4 81 aa5.04□□□□□ -1.6
PDPN-205ENST00000487038 FAM19A4Q96LR4 140 aa5.04□□□□□ -1.6
PDPN-205ENST00000487038 SPXQ9BT56 116 aa5.04□□□□□ -1.6
PDPN-205ENST00000487038 SH3BGRL3Q9H299 93 aa5.04□□□□□ -1.6
PDPN-205ENST00000487038 MCUBQ9NWR8 336 aa5.04□□□□□ -1.6
PDPN-205ENST00000487038 PSENENQ9NZ42 101 aa5.04□□□□□ -1.6
PDPN-205ENST00000487038 CCDC59Q9P031 241 aaKnown RBP5.04□□□□□ -1.6
PDPN-205ENST00000487038 RABL2AQ9UBK7 228 aaPredicted RBP5.04□□□□□ -1.6
PDPN-205ENST00000487038 RABL2BQ9UNT1 228 aa5.04□□□□□ -1.6
PDPN-205ENST00000487038 TRGV11A0A075B6L2 103 aa5.03□□□□□ -1.6
PDPN-205ENST00000487038 AGPAT2O15120 278 aa5.03□□□□□ -1.6
PDPN-205ENST00000487038 RGS5O15539 181 aa5.03□□□□□ -1.6
PDPN-205ENST00000487038 VAMP1P23763 118 aa5.03□□□□□ -1.6
PDPN-205ENST00000487038 ERCC8Q13216 396 aa5.03□□□□□ -1.6
PDPN-205ENST00000487038 IL18Q14116 193 aa5.03□□□□□ -1.6
PDPN-205ENST00000487038 LINC01620Q4KN68 170 aa5.03□□□□□ -1.6
PDPN-205ENST00000487038 LELP1Q5T871 98 aa5.03□□□□□ -1.6
PDPN-205ENST00000487038 C9orf47Q6ZRZ4 202 aa5.03□□□□□ -1.6
PDPN-205ENST00000487038 Q8N976 141 aa5.03□□□□□ -1.6
PDPN-205ENST00000487038 OR4C5Q8NGB2 326 aa5.03□□□□□ -1.6
PDPN-205ENST00000487038 OR1L4Q8NGR5 311 aa5.03□□□□□ -1.6
PDPN-205ENST00000487038 RASL10AQ92737 203 aa5.03□□□□□ -1.6
PDPN-205ENST00000487038 RMI2Q96E14 147 aa5.03□□□□□ -1.6
PDPN-205ENST00000487038 PFDN5Q99471 154 aa5.03□□□□□ -1.6
PDPN-205ENST00000487038 AAMDCQ9H7C9 122 aa5.03□□□□□ -1.6
PDPN-205ENST00000487038 ANKRD20A5PA0PJZ0 165 aa5.02□□□□□ -1.61
PDPN-205ENST00000487038 GGTLC3B5MD39 225 aa5.02□□□□□ -1.61
PDPN-205ENST00000487038 H3BQ15 152 aa5.02□□□□□ -1.61
PDPN-205ENST00000487038 M0R3E3 92 aa5.02□□□□□ -1.61
PDPN-205ENST00000487038 CTDSPLO15194 276 aa5.02□□□□□ -1.61
PDPN-205ENST00000487038 SSSCA1O60232 199 aa5.02□□□□□ -1.61
PDPN-205ENST00000487038 HOXB5P09067 269 aa5.02□□□□□ -1.61
PDPN-205ENST00000487038 FAUP35544 74 aaKnown RBP5.02□□□□□ -1.61
PDPN-205ENST00000487038 PDE6HQ13956 83 aa5.02□□□□□ -1.61
PDPN-205ENST00000487038 RHOHQ15669 191 aa5.02□□□□□ -1.61
PDPN-205ENST00000487038 FAM122CQ6P4D5 195 aa5.02□□□□□ -1.61
PDPN-205ENST00000487038 FAM159AQ6UWV7 190 aa5.02□□□□□ -1.61
PDPN-205ENST00000487038 Q6ZRU5 148 aa5.02□□□□□ -1.61
PDPN-205ENST00000487038 C12orf45Q8N5I9 185 aaPredicted RBP5.02□□□□□ -1.61
PDPN-205ENST00000487038 PRADC1Q9BSG0 188 aa5.02□□□□□ -1.61
PDPN-205ENST00000487038 FUNDC2Q9BWH2 189 aa5.02□□□□□ -1.61
PDPN-205ENST00000487038 TIMM9Q9Y5J7 89 aa5.02□□□□□ -1.61
PDPN-205ENST00000487038 TRBV19A0A075B6N1 114 aa5.01□□□□□ -1.61
PDPN-205ENST00000487038 A0A087WXM4 84 aa5.01□□□□□ -1.61
PDPN-205ENST00000487038 TRBV7-9A0A0J9YWB2 115 aa5.01□□□□□ -1.61
PDPN-205ENST00000487038 LOC100131303A0A0U1RQF7 123 aa5.01□□□□□ -1.61
PDPN-205ENST00000487038 CCNKO75909 580 aa5.01□□□□□ -1.61
PDPN-205ENST00000487038 SEC11BP0C7V7 166 aa5.01□□□□□ -1.61
PDPN-205ENST00000487038 METTL15P1P0C7V9 234 aa5.01□□□□□ -1.61
PDPN-205ENST00000487038 ASIPP42127 132 aa5.01□□□□□ -1.61
PDPN-205ENST00000487038 RAB31Q13636 194 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms