RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	ARL2-SNX15	V9GYD0	113 aa		11.26	□□□□□ -0.61
HDLBP-238	ENST00000479894		A0A1W2PRE2	83 aa		11.25	□□□□□ -0.61
HDLBP-238	ENST00000479894	ZNF705E	A8MWA4	302 aa	Predicted RBP	11.25	□□□□□ -0.61
HDLBP-238	ENST00000479894	HMGB3	O15347	200 aa	Known RBP	11.25	□□□□□ -0.61
HDLBP-238	ENST00000479894		P0DMU3	169 aa		11.25	□□□□□ -0.61
HDLBP-238	ENST00000479894	FAM231A	P0DMU4	169 aa		11.25	□□□□□ -0.61
HDLBP-238	ENST00000479894	FAM231C	P0DMU5	169 aa		11.25	□□□□□ -0.61
HDLBP-238	ENST00000479894	RAN	P62826	216 aa	Known RBP	11.25	□□□□□ -0.61
HDLBP-238	ENST00000479894	MORN3	Q6PF18	240 aa	Predicted RBP	11.25	□□□□□ -0.61
HDLBP-238	ENST00000479894	RPUSD4	Q96CM3	377 aa	Known RBP	11.25	□□□□□ -0.61
HDLBP-238	ENST00000479894	ZNF503	Q96F45	646 aa		11.25	□□□□□ -0.61
HDLBP-238	ENST00000479894	C17orf77	Q96MU5	243 aa		11.25	□□□□□ -0.61
HDLBP-238	ENST00000479894	TCEAL7	Q9BRU2	100 aa		11.25	□□□□□ -0.61
HDLBP-238	ENST00000479894	SAV1	Q9H4B6	383 aa	Predicted RBP	11.25	□□□□□ -0.61
HDLBP-238	ENST00000479894	TRAV8-2	A0A0B4J237	113 aa		11.24	□□□□□ -0.61
HDLBP-238	ENST00000479894	TRAV10	A0A0B4J240	114 aa		11.24	□□□□□ -0.61
HDLBP-238	ENST00000479894	SERTM2	A0A1B0GWG4	89 aa		11.24	□□□□□ -0.61
HDLBP-238	ENST00000479894		K7EQM0	130 aa		11.24	□□□□□ -0.61
HDLBP-238	ENST00000479894	NDUFB4	O95168	129 aa		11.24	□□□□□ -0.61
HDLBP-238	ENST00000479894	IFNA1	P01562	189 aa		11.24	□□□□□ -0.61
HDLBP-238	ENST00000479894	HLA-DRB4	P13762	266 aa		11.24	□□□□□ -0.61
HDLBP-238	ENST00000479894	TAGLN2	P37802	199 aa	Known RBP	11.24	□□□□□ -0.61
HDLBP-238	ENST00000479894	ZNF726P1	Q15940	193 aa		11.24	□□□□□ -0.61
HDLBP-238	ENST00000479894	ACTL10	Q5JWF8	245 aa		11.24	□□□□□ -0.61
HDLBP-238	ENST00000479894	ALKAL2	Q6UX46	152 aa		11.24	□□□□□ -0.61
HDLBP-238	ENST00000479894	APRG1	Q8IVJ8	170 aa		11.24	□□□□□ -0.61
HDLBP-238	ENST00000479894	FAM24B	Q8N5W8	94 aa		11.24	□□□□□ -0.61
HDLBP-238	ENST00000479894	PPP1R14D	Q9NXH3	145 aa		11.24	□□□□□ -0.61
HDLBP-238	ENST00000479894	BOLA1	Q9Y3E2	137 aa		11.24	□□□□□ -0.61
HDLBP-238	ENST00000479894	HLA-DRB4	X5D2U9	266 aa		11.24	□□□□□ -0.61
HDLBP-238	ENST00000479894	AGRN	O00468	2067 aa		11.23	□□□□□ -0.61
HDLBP-238	ENST00000479894		M0R2N4	97 aa		11.23	□□□□□ -0.61
HDLBP-238	ENST00000479894	FHIT	P49789	147 aa		11.23	□□□□□ -0.61
HDLBP-238	ENST00000479894	ICAM4	Q14773	271 aa		11.23	□□□□□ -0.61
HDLBP-238	ENST00000479894	SOHLH1	Q5JUK2	328 aa		11.23	□□□□□ -0.61
HDLBP-238	ENST00000479894	TEX261	Q6UWH6	196 aa		11.23	□□□□□ -0.61
HDLBP-238	ENST00000479894	RNF182	Q8N6D2	247 aa		11.23	□□□□□ -0.61
HDLBP-238	ENST00000479894	TXNDC17	Q9BRA2	123 aa		11.23	□□□□□ -0.61
HDLBP-238	ENST00000479894	C1QTNF4	Q9BXJ3	329 aa		11.23	□□□□□ -0.61
HDLBP-238	ENST00000479894		Q9H3A6	140 aa		11.23	□□□□□ -0.61
HDLBP-238	ENST00000479894		A0A0J9YX75	114 aa		11.22	□□□□□ -0.61
HDLBP-238	ENST00000479894	FBLL1	A6NHQ2	334 aa	Known RBP	11.22	□□□□□ -0.61
HDLBP-238	ENST00000479894		F6UZH7	168 aa		11.22	□□□□□ -0.61
HDLBP-238	ENST00000479894		H3BTX0	84 aa		11.22	□□□□□ -0.61
HDLBP-238	ENST00000479894	SLC17A3	O00476	420 aa		11.22	□□□□□ -0.61
HDLBP-238	ENST00000479894	AMBP	P02760	352 aa		11.22	□□□□□ -0.61
HDLBP-238	ENST00000479894	SNRPC	P09234	159 aa	Known RBP	11.22	□□□□□ -0.61
HDLBP-238	ENST00000479894	OR8A1	Q8NGG7	326 aa		11.22	□□□□□ -0.61
HDLBP-238	ENST00000479894	MANBAL	Q9NQG1	85 aa		11.22	□□□□□ -0.61
HDLBP-238	ENST00000479894	LRP1B	Q9NZR2	4599 aa		11.21	□□□□□ -0.61
HDLBP-238	ENST00000479894	RBAKDN	A6NC62	111 aa		11.21	□□□□□ -0.61
HDLBP-238	ENST00000479894	PGP	A6NDG6	321 aa		11.21	□□□□□ -0.61
HDLBP-238	ENST00000479894		H3BMM0	161 aa		11.21	□□□□□ -0.61
HDLBP-238	ENST00000479894	DEFB4A	O15263	64 aa		11.21	□□□□□ -0.61
HDLBP-238	ENST00000479894	SLC25A5	P05141	298 aa	Known RBP	11.21	□□□□□ -0.61
HDLBP-238	ENST00000479894	TSPO	P30536	169 aa		11.21	□□□□□ -0.61
HDLBP-238	ENST00000479894	FGF8	P55075	233 aa	Predicted RBP	11.21	□□□□□ -0.61
HDLBP-238	ENST00000479894	C5orf17	Q8NAS9	161 aa		11.21	□□□□□ -0.61
HDLBP-238	ENST00000479894	LINC00477	Q96M19	166 aa		11.21	□□□□□ -0.61
HDLBP-238	ENST00000479894	RAB14	P61106	215 aa		11.2	□□□□□ -0.62
HDLBP-238	ENST00000479894	IGFL4	Q6B9Z1	124 aa		11.2	□□□□□ -0.62
HDLBP-238	ENST00000479894		Q6ZR54	194 aa		11.2	□□□□□ -0.62
HDLBP-238	ENST00000479894	SSX7	Q7RTT5	188 aa		11.2	□□□□□ -0.62
HDLBP-238	ENST00000479894	TRPT1	Q86TN4	253 aa	Known RBP	11.2	□□□□□ -0.62
HDLBP-238	ENST00000479894	EXOC3-AS1	Q8N2X6	119 aa		11.2	□□□□□ -0.62
HDLBP-238	ENST00000479894	ZNF680	Q8NEM1	530 aa		11.2	□□□□□ -0.62
HDLBP-238	ENST00000479894	OR4B1	Q8NGF8	309 aa		11.2	□□□□□ -0.62
HDLBP-238	ENST00000479894	C20orf173	Q96LM9	149 aa		11.2	□□□□□ -0.62
HDLBP-238	ENST00000479894	KNCN	A6PVL3	124 aa		11.19	□□□□□ -0.62
HDLBP-238	ENST00000479894	C16orf90	A8MZG2	172 aa		11.19	□□□□□ -0.62
HDLBP-238	ENST00000479894	HLA-DMB	P28068	263 aa		11.19	□□□□□ -0.62
HDLBP-238	ENST00000479894	SUMO1	P63165	101 aa	Known RBP	11.19	□□□□□ -0.62
HDLBP-238	ENST00000479894	HIST1H1A	Q02539	215 aa	Predicted RBP	11.19	□□□□□ -0.62
HDLBP-238	ENST00000479894	TMEM78	Q5T7P6	136 aa		11.19	□□□□□ -0.62
HDLBP-238	ENST00000479894	CST9LP1	Q5W188	147 aa		11.19	□□□□□ -0.62
HDLBP-238	ENST00000479894		Q6ZTC4	211 aa		11.19	□□□□□ -0.62
HDLBP-238	ENST00000479894		Q8NAQ8	132 aa		11.19	□□□□□ -0.62
HDLBP-238	ENST00000479894	HIST1H2BA	Q96A08	127 aa		11.19	□□□□□ -0.62
HDLBP-238	ENST00000479894	TRBV7-9	A0A0J9YWB2	115 aa		11.18	□□□□□ -0.62
HDLBP-238	ENST00000479894	EIF3G	O75821	320 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
HDLBP-238	ENST00000479894	CNN1	P51911	297 aa	Known RBP	11.18	□□□□□ -0.62
HDLBP-238	ENST00000479894	ODF3	Q96PU9	254 aa		11.18	□□□□□ -0.62
HDLBP-238	ENST00000479894	APOB	P04114	4563 aa	Known RBP	11.18	□□□□□ -0.62
HDLBP-238	ENST00000479894	FAM74A7	A6NL05	159 aa		11.17	□□□□□ -0.62
HDLBP-238	ENST00000479894		A8MTW9	85 aa		11.17	□□□□□ -0.62
HDLBP-238	ENST00000479894	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.17	□□□□□ -0.62
HDLBP-238	ENST00000479894	DIRC3	C9JPN6	131 aa		11.17	□□□□□ -0.62
HDLBP-238	ENST00000479894		M0R3E3	92 aa		11.17	□□□□□ -0.62
HDLBP-238	ENST00000479894	NMB	P08949	121 aa		11.17	□□□□□ -0.62
HDLBP-238	ENST00000479894	LEP	P41159	167 aa		11.17	□□□□□ -0.62
HDLBP-238	ENST00000479894	UBE2G2	P60604	165 aa		11.17	□□□□□ -0.62
HDLBP-238	ENST00000479894	C9orf47	Q6ZRZ4	202 aa		11.17	□□□□□ -0.62
HDLBP-238	ENST00000479894	ZNF767P	Q75MW2	155 aa		11.17	□□□□□ -0.62
HDLBP-238	ENST00000479894	ATG101	Q9BSB4	218 aa		11.17	□□□□□ -0.62
HDLBP-238	ENST00000479894	NDUFAF3	Q9BU61	184 aa		11.17	□□□□□ -0.62
HDLBP-238	ENST00000479894	TMPRSS5	Q9H3S3	457 aa		11.17	□□□□□ -0.62
HDLBP-238	ENST00000479894	SCRT2	Q9NQ03	307 aa		11.17	□□□□□ -0.62
HDLBP-238	ENST00000479894	EPDR1	Q9UM22	224 aa		11.17	□□□□□ -0.62
HDLBP-238	ENST00000479894	NPIPB6	E9PJ23	425 aa		11.16	□□□□□ -0.62
HDLBP-238	ENST00000479894	PAGE4	O60829	102 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 66 ms