RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 OTOGLQ3ZCN5 2332 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 IGKV2D-24A0A075B6R9 120 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 IGHV3-21A0A0B4J1V1 117 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 A0A0J9YW62 118 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 SMIM31A0A1B0GVY4 71 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 A8MU10 97 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 LST1O00453 97 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 OVOL1O14753 267 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 OR2H2O95918 312 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 UCHL1P09936 223 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 KRTAP1-4P0C5Y4 121 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 DNAH10OSP0CZ25 163 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 NTF3P20783 257 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 HIST1H2BOP23527 126 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 HIST1H2BBP33778 126 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 HIST1H2BDP58876 126 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 SNRPGP62308 76 aaKnown RBP2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 HIST1H2BCP62807 126 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 PSG9Q00887 426 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 HIST1H1AQ02539 215 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 BSPH1Q075Z2 132 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 BIKQ13323 160 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 TAF9Q16594 264 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 HIST2H2BEQ16778 126 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 LINC00303Q3SY05 128 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 TMEM91Q6ZNR0 172 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 PDZD9Q8IXQ8 264 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 OR51A4Q8NGJ6 313 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 SGMS2Q8NHU3 365 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 ITLN2Q8WWU7 325 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 PSMF1Q92530 271 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 HIST1H2BHQ93079 126 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 BORCS8Q96FH0 119 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 HIST1H2BNQ99877 126 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 HIST1H2BMQ99879 126 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 GGACTQ9BVM4 153 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 TUBA4BQ9H853 241 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 CMC2Q9NRP2 79 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 SLC39A9Q9NUM3 307 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 AMMECR1Q9Y4X0 333 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 CHCHD2Q9Y6H1 151 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 ARHGAP32A7KAX9 2087 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 TTC28Q96AY4 2481 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 SPENQ96T58 3664 aaKnown RBP2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 BOD1L1Q8NFC6 3051 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 DYSFO75923 2080 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 CUL9Q8IWT3 2517 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 CACNA1DQ01668 2161 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 ARFGEF3Q5TH69 2177 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 IGLV3-12A0A075B6K2 115 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 MEIKINA0A087WXM9 373 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 TRAV38-1A0A0B4J264 116 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 A8MUN3 132 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 C1orf196B1AJZ1 125 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 C9JCJ5 164 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 ZNF670-ZNF695F2Z2N8 137 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 PLA2G10O15496 165 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 GGCTO75223 188 aaKnown RBP2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 CST7O76096 145 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 TFF1P04155 84 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 PRM2P04554 102 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 CD14P08571 375 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 SCTP09683 121 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 ASAH2BP0C7U1 165 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 LGALS3P17931 250 aaKnown RBP2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 TMBIM6P55061 237 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 FXYD7P58549 80 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 TAS2R20P59543 309 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 YPEL3P61236 119 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 CCL20P78556 96 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 RELAQ04206 551 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 AKR1C1Q04828 323 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 EIF3IQ13347 325 aaKnown RBP2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 ENDOGQ14249 297 aaKnown RBP2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 RRN3P1Q2M238 152 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 MORN2Q502X0 79 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 PYDC2Q56P42 97 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 Q5W150 140 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 ZNF322Q6U7Q0 402 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 AMN1Q8IY45 258 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 MIR7-3HGQ8N6C7 128 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 DAND5Q8N907 189 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 SLC30A7Q8NEW0 376 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 OR51T1Q8NGJ9 327 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 OR4C16Q8NGL9 310 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 HIST1H2BAQ96A08 127 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 SLC25A21Q9BQT8 299 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 ZNF286AQ9HBT8 521 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 NAT8BQ9UHF3 227 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 COL6A6A6NMZ7 2263 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 PTPRZ1P23471 2315 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 FAM186AA6NE01 2351 aa2.35□□□□□ -2.03
HMGB1P25-201ENST00000468402 ZNF292O60281 2723 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 RIF1Q5UIP0 2472 aaKnown RBP2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 ATMQ13315 3056 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 DOCK11Q5JSL3 2073 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 CACNA1HO95180 2353 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 IGHV3-43A0A0B4J1X8 118 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 IRGMA1A4Y4 181 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms