RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 NPIPB6E9PJ23 425 aa6.94□□□□□ -1.3
PKP4-208ENST00000462335 H7BYZ3 331 aa6.94□□□□□ -1.3
PKP4-208ENST00000462335 IGKV2D-40P01614 121 aaPredicted RBP6.94□□□□□ -1.3
PKP4-208ENST00000462335 STAG3L2P0CL84 134 aa6.94□□□□□ -1.3
PKP4-208ENST00000462335 STAG3L3P0CL85 134 aa6.94□□□□□ -1.3
PKP4-208ENST00000462335 ZNF138P52744 262 aa6.94□□□□□ -1.3
PKP4-208ENST00000462335 NANOS2P60321 138 aaKnown RBP6.94□□□□□ -1.3
PKP4-208ENST00000462335 AMTNQ6UX39 209 aa6.94□□□□□ -1.3
PKP4-208ENST00000462335 OR11H4Q8NGC9 324 aa6.94□□□□□ -1.3
PKP4-208ENST00000462335 FAM213BQ8TBF2 198 aa6.94□□□□□ -1.3
PKP4-208ENST00000462335 NEU1Q99519 415 aa6.94□□□□□ -1.3
PKP4-208ENST00000462335 C20orf144Q9BQM9 153 aa6.94□□□□□ -1.3
PKP4-208ENST00000462335 MAP1LC3B2A6NCE7 125 aa6.93□□□□□ -1.3
PKP4-208ENST00000462335 A8MTW9 85 aa6.93□□□□□ -1.3
PKP4-208ENST00000462335 DIRC3C9JPN6 131 aa6.93□□□□□ -1.3
PKP4-208ENST00000462335 F6UZH7 168 aa6.93□□□□□ -1.3
PKP4-208ENST00000462335 G3V3Q6 166 aa6.93□□□□□ -1.3
PKP4-208ENST00000462335 RGS13O14921 159 aa6.93□□□□□ -1.3
PKP4-208ENST00000462335 C1QBP02746 253 aa6.93□□□□□ -1.3
PKP4-208ENST00000462335 SEC11BP0C7V7 166 aa6.93□□□□□ -1.3
PKP4-208ENST00000462335 RBMY1A1P0DJD3 496 aaKnown RBP6.93□□□□□ -1.3
PKP4-208ENST00000462335 RBMY1CP0DJD4 496 aa6.93□□□□□ -1.3
PKP4-208ENST00000462335 CT45A10P0DMU9 189 aa6.93□□□□□ -1.3
PKP4-208ENST00000462335 PPT1P50897 306 aa6.93□□□□□ -1.3
PKP4-208ENST00000462335 TAS2R60P59551 318 aa6.93□□□□□ -1.3
PKP4-208ENST00000462335 SUMO1P63165 101 aaKnown RBP6.93□□□□□ -1.3
PKP4-208ENST00000462335 RBMY1FQ15415 496 aaKnown RBP6.93□□□□□ -1.3
PKP4-208ENST00000462335 CST9LP1Q5W188 147 aa6.93□□□□□ -1.3
PKP4-208ENST00000462335 ZNF705AQ6ZN79 300 aaPredicted RBP6.93□□□□□ -1.3
PKP4-208ENST00000462335 C9orf47Q6ZRZ4 202 aa6.93□□□□□ -1.3
PKP4-208ENST00000462335 GOLT1AQ6ZVE7 132 aa6.93□□□□□ -1.3
PKP4-208ENST00000462335 Q8NAQ8 132 aa6.93□□□□□ -1.3
PKP4-208ENST00000462335 SFT2D1Q8WV19 159 aa6.93□□□□□ -1.3
PKP4-208ENST00000462335 PHLDA1Q8WV24 401 aaPredicted RBP6.93□□□□□ -1.3
PKP4-208ENST00000462335 ST6GAL2Q96JF0 529 aa6.93□□□□□ -1.3
PKP4-208ENST00000462335 ODF3Q96PU9 254 aa6.93□□□□□ -1.3
PKP4-208ENST00000462335 VGLL1Q99990 258 aa6.93□□□□□ -1.3
PKP4-208ENST00000462335 NKX6-2Q9C056 277 aaPredicted RBP6.93□□□□□ -1.3
PKP4-208ENST00000462335 MAP1LC3BQ9GZQ8 125 aa6.93□□□□□ -1.3
PKP4-208ENST00000462335 AGPAT4-IT1Q9H0P7 198 aa6.93□□□□□ -1.3
PKP4-208ENST00000462335 CYTL1Q9NRR1 136 aa6.93□□□□□ -1.3
PKP4-208ENST00000462335 X6R8D5 127 aa6.93□□□□□ -1.3
PKP4-208ENST00000462335 SERTM2A0A1B0GWG4 89 aa6.92□□□□□ -1.3
PKP4-208ENST00000462335 C7orf71A4D174 169 aa6.92□□□□□ -1.3
PKP4-208ENST00000462335 RBAKDNA6NC62 111 aa6.92□□□□□ -1.3
PKP4-208ENST00000462335 CBY3A6NI87 242 aa6.92□□□□□ -1.3
PKP4-208ENST00000462335 SNURFLB1AK76 121 aa6.92□□□□□ -1.3
PKP4-208ENST00000462335 C11orf94C9JXX5 98 aa6.92□□□□□ -1.3
PKP4-208ENST00000462335 FGF8P55075 233 aaPredicted RBP6.92□□□□□ -1.3
PKP4-208ENST00000462335 UBE2G2P60604 165 aa6.92□□□□□ -1.3
PKP4-208ENST00000462335 DAD1P61803 113 aa6.92□□□□□ -1.3
PKP4-208ENST00000462335 CEMP1Q6PRD7 247 aaPredicted RBP6.92□□□□□ -1.3
PKP4-208ENST00000462335 DPPA3Q6W0C5 159 aa6.92□□□□□ -1.3
PKP4-208ENST00000462335 C1orf158Q8N1D5 194 aa6.92□□□□□ -1.3
PKP4-208ENST00000462335 C5orf17Q8NAS9 161 aa6.92□□□□□ -1.3
PKP4-208ENST00000462335 TMED6Q8WW62 240 aa6.92□□□□□ -1.3
PKP4-208ENST00000462335 ZNF503Q96F45 646 aa6.92□□□□□ -1.3
PKP4-208ENST00000462335 C16orf74Q96GX8 76 aa6.92□□□□□ -1.3
PKP4-208ENST00000462335 STAB2Q8WWQ8 2551 aa6.91□□□□□ -1.3
PKP4-208ENST00000462335 A0A1B0GV50 99 aa6.91□□□□□ -1.3
PKP4-208ENST00000462335 NMBP08949 121 aa6.91□□□□□ -1.3
PKP4-208ENST00000462335 H2AFB1P0C5Y9 115 aa6.91□□□□□ -1.3
PKP4-208ENST00000462335 HTN3P15516 51 aa6.91□□□□□ -1.3
PKP4-208ENST00000462335 RAB5CP51148 216 aa6.91□□□□□ -1.3
PKP4-208ENST00000462335 GFI1BQ5VTD9 330 aa6.91□□□□□ -1.3
PKP4-208ENST00000462335 ZNF493Q6ZR52 646 aa6.91□□□□□ -1.3
PKP4-208ENST00000462335 SLC51BQ86UW2 128 aa6.91□□□□□ -1.3
PKP4-208ENST00000462335 ARL6IP6Q8N6S5 226 aa6.91□□□□□ -1.3
PKP4-208ENST00000462335 C2CD4CQ8TF44 421 aa6.91□□□□□ -1.3
PKP4-208ENST00000462335 PYGO2Q9BRQ0 406 aa6.91□□□□□ -1.3
PKP4-208ENST00000462335 ZNF492Q9P255 531 aa6.91□□□□□ -1.3
PKP4-208ENST00000462335 YTHDF2Q9Y5A9 579 aaKnown RBP6.91□□□□□ -1.3
PKP4-208ENST00000462335 HUWE1Q7Z6Z7 4374 aaKnown RBP6.9□□□□□ -1.3
PKP4-208ENST00000462335 TENM3Q9P273 2699 aa6.9□□□□□ -1.3
PKP4-208ENST00000462335 TRAV10A0A0B4J240 114 aa6.9□□□□□ -1.3
PKP4-208ENST00000462335 A0A1W2PRE2 83 aa6.9□□□□□ -1.3
PKP4-208ENST00000462335 FBLL1A6NHQ2 334 aaKnown RBP6.9□□□□□ -1.3
PKP4-208ENST00000462335 IGLL5B9A064 214 aa6.9□□□□□ -1.3
PKP4-208ENST00000462335 CRXO43186 299 aaPredicted RBP6.9□□□□□ -1.3
PKP4-208ENST00000462335 DEFB130BP0DP73 79 aa6.9□□□□□ -1.3
PKP4-208ENST00000462335 DEFB130AP0DP74 79 aa6.9□□□□□ -1.3
PKP4-208ENST00000462335 LGALSLQ3ZCW2 172 aaPredicted RBP6.9□□□□□ -1.3
PKP4-208ENST00000462335 FAM222AQ5U5X8 452 aa6.9□□□□□ -1.3
PKP4-208ENST00000462335 FAM159AQ6UWV7 190 aa6.9□□□□□ -1.3
PKP4-208ENST00000462335 ZNF767PQ75MW2 155 aa6.9□□□□□ -1.3
PKP4-208ENST00000462335 Q8TAT8 98 aa6.9□□□□□ -1.3
PKP4-208ENST00000462335 TREM1Q9NP99 234 aa6.9□□□□□ -1.3
PKP4-208ENST00000462335 EPDR1Q9UM22 224 aa6.9□□□□□ -1.3
PKP4-208ENST00000462335 TIMM8BQ9Y5J9 83 aaPredicted RBP6.9□□□□□ -1.3
PKP4-208ENST00000462335 LENEPQ9Y5L5 61 aa6.9□□□□□ -1.3
PKP4-208ENST00000462335 DEFB131BA0A096LNP1 70 aa6.89□□□□□ -1.31
PKP4-208ENST00000462335 TRBV7-9A0A0J9YWB2 115 aa6.89□□□□□ -1.31
PKP4-208ENST00000462335 LYRM9A8MSI8 78 aa6.89□□□□□ -1.31
PKP4-208ENST00000462335 GNG5P63218 68 aa6.89□□□□□ -1.31
PKP4-208ENST00000462335 BTN1A1Q13410 526 aa6.89□□□□□ -1.31
PKP4-208ENST00000462335 SAPCD1Q5SSQ6 148 aa6.89□□□□□ -1.31
PKP4-208ENST00000462335 SSX7Q7RTT5 188 aa6.89□□□□□ -1.31
PKP4-208ENST00000462335 PRNTQ86SH4 94 aa6.89□□□□□ -1.31
PKP4-208ENST00000462335 CYB561D1Q8N8Q1 229 aa6.89□□□□□ -1.31
PKP4-208ENST00000462335 ZNF680Q8NEM1 530 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms