RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 SERF2P84101 59 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 ZNF90Q03938 601 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 C1orf61Q13536 156 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 C4orf26Q17RF5 130 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 DEFB116Q30KQ4 102 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 SP6Q3SY56 376 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 GDF5OSQ5U4N7 250 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 CFAP126Q5VTH2 177 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 SLC48A1Q6P1K1 146 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 Q6ZQT7 251 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 SBSPONQ8IVN8 264 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 RPP25LQ8N5L8 163 aaKnown RBP2.03□□□□□ -2.08
LINC01040-201ENST00000425048 TMEM86BQ8N661 226 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 C3orf56Q8N813 242 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 C8orf31Q8N9H6 132 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 LMX1AQ8TE12 382 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 H1FXQ92522 213 aaKnown RBP2.03□□□□□ -2.08
LINC01040-201ENST00000425048 ADAT3Q96EY9 351 aaPredicted RBP2.03□□□□□ -2.08
LINC01040-201ENST00000425048 COQ2Q96H96 371 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 RASL11BQ9BPW5 248 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 PRADC1Q9BSG0 188 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 OR2H1Q9GZK4 316 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 AKIRIN1Q9H9L7 192 aaPredicted RBP2.03□□□□□ -2.08
LINC01040-201ENST00000425048 ZNF286AQ9HBT8 521 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 C21orf62Q9NYP8 219 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 IDI2-AS1Q9NZ38 188 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 HIGD1BQ9P298 99 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 YTHDF2Q9Y5A9 579 aaKnown RBP2.03□□□□□ -2.08
LINC01040-201ENST00000425048 LY96Q9Y6Y9 160 aa2.03□□□□□ -2.08
LINC01040-201ENST00000425048 CACNA1CQ13936 2221 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 SHANK1Q9Y566 2161 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 IGHV1-24A0A0C4DH33 117 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 A0A0U1RRA0 63 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 C9JCJ5 164 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 C11orf94C9JXX5 98 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 LY6LH3BQJ8 138 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 K7ERJ3 54 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 PLPP1O14494 284 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 CHST1O43916 411 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 TIMM8AO60220 97 aaPredicted RBP2.02□□□□□ -2.09
LINC01040-201ENST00000425048 SSSCA1O60232 199 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 NDUFB2O95178 105 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 NDUFA7O95182 113 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 PPYP01298 95 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 KLK1P06870 262 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 CISD3P0C7P0 127 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 ZNF688P0C7X2 276 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 MPV17P39210 176 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 ATP5G3P48201 142 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 DAP3P51398 398 aaKnown RBP2.02□□□□□ -2.09
LINC01040-201ENST00000425048 GNG5P63218 68 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 SLC38A11Q08AI6 406 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 EDDM3AQ14507 147 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 TTC32Q5I0X7 151 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 TEX36Q5VZQ5 186 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 DUX4L9Q6RFH8 374 aaPredicted RBP2.02□□□□□ -2.09
LINC01040-201ENST00000425048 RASL11AQ6T310 242 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 HRCT1Q6UXD1 115 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 BRD3OSQ6XYD6 125 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 LINC00336Q6ZUF6 198 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 TEN1Q86WV5 123 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 OR1L4Q8NGR5 311 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 OR2A1Q8NGT9 310 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 OR6K6Q8NGW6 343 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 OR10J6PQ8NGY7 276 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 OTOSQ8NHW6 89 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 SCGB1C1Q8TD33 95 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 ARHGAP5-AS1Q96IT6 56 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 TMEM59Q9BXS4 323 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 ATG10Q9H0Y0 220 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 SIRPDQ9H106 197 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 SLC25A22Q9H936 323 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 EDA2RQ9HAV5 297 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 KCNIP2Q9NS61 270 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 SLC39A9Q9NUM3 307 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 PRO0628Q9UI54 55 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 PRNDQ9UKY0 176 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 FOXA2Q9Y261 457 aaPredicted RBP2.02□□□□□ -2.09
LINC01040-201ENST00000425048 LHFPL6Q9Y693 200 aa2.02□□□□□ -2.09
LINC01040-201ENST00000425048 TNRC6BQ9UPQ9 1833 aaKnown RBP2.02□□□□□ -2.09
LINC01040-201ENST00000425048 HEATR1Q9H583 2144 aaKnown RBP2.02□□□□□ -2.09
LINC01040-201ENST00000425048 A0A0B4J2E0 115 aa2.01□□□□□ -2.09
LINC01040-201ENST00000425048 A0A1B0GX12 115 aa2.01□□□□□ -2.09
LINC01040-201ENST00000425048 SMIM27A0A1W2PRY6 76 aa2.01□□□□□ -2.09
LINC01040-201ENST00000425048 TCRBV4S1A1TA0A5B7 111 aa2.01□□□□□ -2.09
LINC01040-201ENST00000425048 IZUMO1RA6ND01 250 aa2.01□□□□□ -2.09
LINC01040-201ENST00000425048 M0R2P5 195 aa2.01□□□□□ -2.09
LINC01040-201ENST00000425048 ANGPTL7O43827 346 aa2.01□□□□□ -2.09
LINC01040-201ENST00000425048 DHRS3O75911 302 aa2.01□□□□□ -2.09
LINC01040-201ENST00000425048 LEPROTL1O95214 131 aa2.01□□□□□ -2.09
LINC01040-201ENST00000425048 NCR2O95944 276 aa2.01□□□□□ -2.09
LINC01040-201ENST00000425048 IGHMP01871 453 aa2.01□□□□□ -2.09
LINC01040-201ENST00000425048 HMGN2P05204 90 aaKnown RBP2.01□□□□□ -2.09
LINC01040-201ENST00000425048 SCTP09683 121 aa2.01□□□□□ -2.09
LINC01040-201ENST00000425048 CT62P0C5K7 136 aa2.01□□□□□ -2.09
LINC01040-201ENST00000425048 OR5AL1P0C617 328 aa2.01□□□□□ -2.09
LINC01040-201ENST00000425048 CNTFRP26992 372 aa2.01□□□□□ -2.09
LINC01040-201ENST00000425048 ASIPP42127 132 aa2.01□□□□□ -2.09
LINC01040-201ENST00000425048 EMP1P54849 157 aa2.01□□□□□ -2.09
LINC01040-201ENST00000425048 RBM11P57052 281 aaKnown RBP2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 613.7 ms