RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 SLAQ13239 276 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 ICAM4Q14773 271 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 LGALS9BQ3B8N2 356 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 IBA57Q5T440 356 aaKnown RBP4.57□□□□□ -1.68
USP54-202ENST00000413442 FAM222AQ5U5X8 452 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 MORN5Q5VZ52 161 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 IGFL4Q6B9Z1 124 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 Q6ZTC4 211 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 MIR17HGQ75NE6 70 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 OR2T35Q8NGX2 323 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 CMTM2Q8TAZ6 248 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 ZNF503Q96F45 646 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 FAM19A4Q96LR4 140 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 ACTR3CQ9C0K3 210 aaPredicted RBP4.57□□□□□ -1.68
USP54-202ENST00000413442 OTORQ9NRC9 128 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 ZNF492Q9P255 531 aa4.57□□□□□ -1.68
USP54-202ENST00000413442 YTHDF2Q9Y5A9 579 aaKnown RBP4.57□□□□□ -1.68
USP54-202ENST00000413442 IGHV4-4A0A075B6R2 117 aa4.56□□□□□ -1.68
USP54-202ENST00000413442 A0A0D9SG52 128 aa4.56□□□□□ -1.68
USP54-202ENST00000413442 C7orf71A4D174 169 aa4.56□□□□□ -1.68
USP54-202ENST00000413442 SLC17A3O00476 420 aa4.56□□□□□ -1.68
USP54-202ENST00000413442 ZNF324O75467 553 aaPredicted RBP4.56□□□□□ -1.68
USP54-202ENST00000413442 STAG3L2P0CL84 134 aa4.56□□□□□ -1.68
USP54-202ENST00000413442 STAG3L3P0CL85 134 aa4.56□□□□□ -1.68
USP54-202ENST00000413442 CT45A10P0DMU9 189 aa4.56□□□□□ -1.68
USP54-202ENST00000413442 PYYP10082 97 aa4.56□□□□□ -1.68
USP54-202ENST00000413442 CDC34P49427 236 aaPredicted RBP4.56□□□□□ -1.68
USP54-202ENST00000413442 FXYD7P58549 80 aa4.56□□□□□ -1.68
USP54-202ENST00000413442 RANP62826 216 aaKnown RBP4.56□□□□□ -1.68
USP54-202ENST00000413442 UBE2L3P68036 154 aaKnown RBP4.56□□□□□ -1.68
USP54-202ENST00000413442 ZNF345Q14585 488 aa4.56□□□□□ -1.68
USP54-202ENST00000413442 EIF4E3Q8N5X7 224 aaKnown RBP4.56□□□□□ -1.68
USP54-202ENST00000413442 BLNKQ8WV28 456 aa4.56□□□□□ -1.68
USP54-202ENST00000413442 ST6GAL2Q96JF0 529 aa4.56□□□□□ -1.68
USP54-202ENST00000413442 KCNS1Q96KK3 526 aa4.56□□□□□ -1.68
USP54-202ENST00000413442 TCEAL7Q9BRU2 100 aa4.56□□□□□ -1.68
USP54-202ENST00000413442 AGPAT4-IT1Q9H0P7 198 aa4.56□□□□□ -1.68
USP54-202ENST00000413442 A0A1W2PRE2 83 aa4.55□□□□□ -1.68
USP54-202ENST00000413442 PGPA6NDG6 321 aa4.55□□□□□ -1.68
USP54-202ENST00000413442 UMAD1C9J7I0 102 aa4.55□□□□□ -1.68
USP54-202ENST00000413442 DIRC3C9JPN6 131 aa4.55□□□□□ -1.68
USP54-202ENST00000413442 F6UZH7 168 aa4.55□□□□□ -1.68
USP54-202ENST00000413442 BTF3P20290 206 aaKnown RBP4.55□□□□□ -1.68
USP54-202ENST00000413442 ATP6V0CP27449 155 aa4.55□□□□□ -1.68
USP54-202ENST00000413442 DEFB1P60022 68 aa4.55□□□□□ -1.68
USP54-202ENST00000413442 TDRG1Q3Y452 100 aa4.55□□□□□ -1.68
USP54-202ENST00000413442 LGALSLQ3ZCW2 172 aaPredicted RBP4.55□□□□□ -1.68
USP54-202ENST00000413442 SAPCD1Q5SSQ6 148 aa4.55□□□□□ -1.68
USP54-202ENST00000413442 DPPA3Q6W0C5 159 aa4.55□□□□□ -1.68
USP54-202ENST00000413442 LINC00612Q8N6U2 182 aa4.55□□□□□ -1.68
USP54-202ENST00000413442 POM121L12Q8N7R1 296 aa4.55□□□□□ -1.68
USP54-202ENST00000413442 STOML3Q8TAV4 291 aa4.55□□□□□ -1.68
USP54-202ENST00000413442 RNASE8Q8TDE3 154 aaKnown RBP4.55□□□□□ -1.68
USP54-202ENST00000413442 SPXQ9BT56 116 aa4.55□□□□□ -1.68
USP54-202ENST00000413442 NDFIP1Q9BT67 221 aa4.55□□□□□ -1.68
USP54-202ENST00000413442 SMIM3Q9BZL3 60 aa4.55□□□□□ -1.68
USP54-202ENST00000413442 Q9H3A6 140 aa4.55□□□□□ -1.68
USP54-202ENST00000413442 WFDC1Q9HC57 220 aa4.55□□□□□ -1.68
USP54-202ENST00000413442 CSMD3Q7Z407 3707 aa4.54□□□□□ -1.68
USP54-202ENST00000413442 TRAV12-2A0A075B6T6 113 aa4.54□□□□□ -1.68
USP54-202ENST00000413442 TRAV12-3A0A0B4J271 114 aa4.54□□□□□ -1.68
USP54-202ENST00000413442 PLAC8L1A1L4L8 177 aa4.54□□□□□ -1.68
USP54-202ENST00000413442 ZNF705GA8MUZ8 300 aaPredicted RBP4.54□□□□□ -1.68
USP54-202ENST00000413442 PRAC2D3DTV9 90 aa4.54□□□□□ -1.68
USP54-202ENST00000413442 M0R3E3 92 aa4.54□□□□□ -1.68
USP54-202ENST00000413442 RGS13O14921 159 aa4.54□□□□□ -1.68
USP54-202ENST00000413442 OR10J4P0C629 311 aa4.54□□□□□ -1.68
USP54-202ENST00000413442 SEC11BP0C7V7 166 aa4.54□□□□□ -1.68
USP54-202ENST00000413442 FHITP49789 147 aa4.54□□□□□ -1.68
USP54-202ENST00000413442 EMP1P54849 157 aa4.54□□□□□ -1.68
USP54-202ENST00000413442 GCSAMLQ5JQS6 135 aa4.54□□□□□ -1.68
USP54-202ENST00000413442 AKR1C8PQ5T2L2 129 aa4.54□□□□□ -1.68
USP54-202ENST00000413442 GFI1BQ5VTD9 330 aa4.54□□□□□ -1.68
USP54-202ENST00000413442 Q6AWC8 147 aa4.54□□□□□ -1.68
USP54-202ENST00000413442 EIF5AL1Q6IS14 154 aaKnown RBP4.54□□□□□ -1.68
USP54-202ENST00000413442 FAM122CQ6P4D5 195 aa4.54□□□□□ -1.68
USP54-202ENST00000413442 FAM159AQ6UWV7 190 aa4.54□□□□□ -1.68
USP54-202ENST00000413442 BAP18Q8IXM2 172 aa4.54□□□□□ -1.68
USP54-202ENST00000413442 EXOC3-AS1Q8N2X6 119 aa4.54□□□□□ -1.68
USP54-202ENST00000413442 C5orf17Q8NAS9 161 aa4.54□□□□□ -1.68
USP54-202ENST00000413442 HSD17B11Q8NBQ5 300 aa4.54□□□□□ -1.68
USP54-202ENST00000413442 RAB24Q969Q5 203 aa4.54□□□□□ -1.68
USP54-202ENST00000413442 CELA1Q9UNI1 258 aa4.54□□□□□ -1.68
USP54-202ENST00000413442 ARL2-SNX15V9GYD0 113 aa4.54□□□□□ -1.68
USP54-202ENST00000413442 TRGV11A0A075B6L2 103 aa4.53□□□□□ -1.68
USP54-202ENST00000413442 IGHV1OR15-1A0A075B7D0 117 aa4.53□□□□□ -1.68
USP54-202ENST00000413442 FXYD6-FXYD2A0A087WZ82 144 aa4.53□□□□□ -1.68
USP54-202ENST00000413442 TRAV21A0A0B4J279 112 aa4.53□□□□□ -1.68
USP54-202ENST00000413442 CTXND1A0A1B0GTU2 59 aa4.53□□□□□ -1.68
USP54-202ENST00000413442 RNF222A6NCQ9 220 aa4.53□□□□□ -1.68
USP54-202ENST00000413442 TEX46H3BTG2 121 aa4.53□□□□□ -1.68
USP54-202ENST00000413442 H3BTX0 84 aa4.53□□□□□ -1.68
USP54-202ENST00000413442 K7EP13 123 aa4.53□□□□□ -1.68
USP54-202ENST00000413442 S100A9P06702 114 aaKnown RBP4.53□□□□□ -1.68
USP54-202ENST00000413442 AZU1P20160 251 aa4.53□□□□□ -1.68
USP54-202ENST00000413442 GCHFRP30047 84 aa4.53□□□□□ -1.68
USP54-202ENST00000413442 PPT1P50897 306 aa4.53□□□□□ -1.68
USP54-202ENST00000413442 CCL18P55774 89 aa4.53□□□□□ -1.68
USP54-202ENST00000413442 LINC00336Q6ZUF6 198 aa4.53□□□□□ -1.68
USP54-202ENST00000413442 IQCF2Q8IXL9 164 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms