RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 AP2S1P53680 142 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 BLCAPP62952 87 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 UBA52P62987 128 aaKnown RBP3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 EIF5AP63241 154 aaKnown RBP3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 ZNF266Q14584 549 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 SPINK9Q5DT21 86 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 UNQ5815/PRO19632Q6UWF5 114 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 COMMD1Q8N668 190 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 LFNGQ8NES3 379 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 OR10P1Q8NGE3 313 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 OR1S2Q8NGQ3 325 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 GRPEL2Q8TAA5 225 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 OR4C12Q96R67 309 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 FAM103A1Q9BTL3 118 aaKnown RBP3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 CHRDL1Q9BU40 450 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 PARD6GQ9BYG4 376 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 C16orf95Q9H693 158 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 NPVFQ9HCQ7 196 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 PARP11Q9NR21 331 aa3.16□□□□□ -1.9
HMGB3P19-201ENST00000403971 KANTRA0A1W2PQU2 76 aa3.15□□□□□ -1.91
HMGB3P19-201ENST00000403971 FAM223BA6NKX1 122 aa3.15□□□□□ -1.91
HMGB3P19-201ENST00000403971 I3L2K1 104 aa3.15□□□□□ -1.91
HMGB3P19-201ENST00000403971 MPDU1O75352 247 aa3.15□□□□□ -1.91
HMGB3P19-201ENST00000403971 CST7O76096 145 aa3.15□□□□□ -1.91
HMGB3P19-201ENST00000403971 CRYBA1P05813 215 aa3.15□□□□□ -1.91
HMGB3P19-201ENST00000403971 DEFA4P12838 97 aa3.15□□□□□ -1.91
HMGB3P19-201ENST00000403971 CRISP2P16562 243 aa3.15□□□□□ -1.91
HMGB3P19-201ENST00000403971 SLC35B1P78383 322 aa3.15□□□□□ -1.91
HMGB3P19-201ENST00000403971 SLC38A11Q08AI6 406 aa3.15□□□□□ -1.91
HMGB3P19-201ENST00000403971 LCN12Q6JVE5 192 aa3.15□□□□□ -1.91
HMGB3P19-201ENST00000403971 TMEM144Q7Z5S9 345 aa3.15□□□□□ -1.91
HMGB3P19-201ENST00000403971 SLC51BQ86UW2 128 aa3.15□□□□□ -1.91
HMGB3P19-201ENST00000403971 FAM223AQ8IWN6 122 aa3.15□□□□□ -1.91
HMGB3P19-201ENST00000403971 UBAC2Q8NBM4 344 aa3.15□□□□□ -1.91
HMGB3P19-201ENST00000403971 NECAP1Q8NC96 275 aa3.15□□□□□ -1.91
HMGB3P19-201ENST00000403971 OR5C1Q8NGR4 320 aa3.15□□□□□ -1.91
HMGB3P19-201ENST00000403971 STOML3Q8TAV4 291 aa3.15□□□□□ -1.91
HMGB3P19-201ENST00000403971 TMEM147Q9BVK8 224 aa3.15□□□□□ -1.91
HMGB3P19-201ENST00000403971 SLC25A39Q9BZJ4 359 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P19-201ENST00000403971 ARL6Q9H0F7 186 aa3.15□□□□□ -1.91
HMGB3P19-201ENST00000403971 ARV1Q9H2C2 271 aa3.15□□□□□ -1.91
HMGB3P19-201ENST00000403971 ZC4H2Q9NQZ6 224 aa3.15□□□□□ -1.91
HMGB3P19-201ENST00000403971 CYTL1Q9NRR1 136 aa3.15□□□□□ -1.91
HMGB3P19-201ENST00000403971 UQCC1Q9NVA1 299 aa3.15□□□□□ -1.91
HMGB3P19-201ENST00000403971 NIPBLQ6KC79 2804 aaeCLIP3.15□□□□□ -1.91
HMGB3P19-201ENST00000403971 TRAV30A0A087WSZ9 112 aa3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 BORCS7-ASMTA0A0B4J1R7 106 aa3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 G3V318 75 aa3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 K7EIM0 57 aa3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 MT-CO2P00403 227 aa3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 IFNA5P01569 189 aa3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 REG1AP05451 166 aa3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 SEC11BP0C7V7 166 aa3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 APELAP0DMC3 54 aa3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 PSMB8P28062 276 aa3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 OPRK1P41145 380 aa3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 NKX2-5P52952 324 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 RHOGP84095 191 aa3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 RAB31Q13636 194 aa3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 EIF5AL1Q6IS14 154 aaKnown RBP3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 SLC16A13Q7RTY0 426 aa3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 BAP18Q8IXM2 172 aa3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 OR5T1Q8NG75 326 aa3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 OR4X1Q8NH49 305 aa3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 MYOZ3Q8TDC0 251 aa3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 GNPNAT1Q96EK6 184 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 USMG5Q96IX5 58 aa3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 ATP5SQ99766 215 aa3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 GINS3Q9BRX5 216 aa3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 PSMG3Q9BT73 122 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 ZNF471Q9BX82 626 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 WDR61Q9GZS3 305 aaKnown RBP3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 PAIP2BQ9ULR5 123 aaKnown RBP3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 TIMM9Q9Y5J7 89 aa3.14□□□□□ -1.91
HMGB3P19-201ENST00000403971 TRBV7-1A0A0A6YYK4 115 aa3.13□□□□□ -1.91
HMGB3P19-201ENST00000403971 C17orf112F2Z3M2 114 aa3.13□□□□□ -1.91
HMGB3P19-201ENST00000403971 OR2J3O76001 311 aa3.13□□□□□ -1.91
HMGB3P19-201ENST00000403971 CFDP00746 253 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P19-201ENST00000403971 TRGV3P03979 118 aa3.13□□□□□ -1.91
HMGB3P19-201ENST00000403971 FABP1P07148 127 aa3.13□□□□□ -1.91
HMGB3P19-201ENST00000403971 IGLC1P0CG04 106 aa3.13□□□□□ -1.91
HMGB3P19-201ENST00000403971 TPT1P13693 172 aaKnown RBP3.13□□□□□ -1.91
HMGB3P19-201ENST00000403971 RAB9AP51151 201 aa3.13□□□□□ -1.91
HMGB3P19-201ENST00000403971 RND2P52198 227 aa3.13□□□□□ -1.91
HMGB3P19-201ENST00000403971 SERF2P84101 59 aa3.13□□□□□ -1.91
HMGB3P19-201ENST00000403971 AKR1C1Q04828 323 aa3.13□□□□□ -1.91
HMGB3P19-201ENST00000403971 CLINT1Q14677 625 aa3.13□□□□□ -1.91
HMGB3P19-201ENST00000403971 RPL7L1Q6DKI1 246 aaKnown RBP3.13□□□□□ -1.91
HMGB3P19-201ENST00000403971 ZNF709Q8N972 641 aa3.13□□□□□ -1.91
HMGB3P19-201ENST00000403971 Q8N9L7 120 aa3.13□□□□□ -1.91
HMGB3P19-201ENST00000403971 OR51G1Q8NGK1 321 aa3.13□□□□□ -1.91
HMGB3P19-201ENST00000403971 OR2G3Q8NGZ4 309 aa3.13□□□□□ -1.91
HMGB3P19-201ENST00000403971 ZNF502Q8TBZ5 544 aa3.13□□□□□ -1.91
HMGB3P19-201ENST00000403971 SCGB1C1Q8TD33 95 aa3.13□□□□□ -1.91
HMGB3P19-201ENST00000403971 UBE2E2Q96LR5 201 aa3.13□□□□□ -1.91
HMGB3P19-201ENST00000403971 TRGV9Q99603 122 aa3.13□□□□□ -1.91
HMGB3P19-201ENST00000403971 SMIM3Q9BZL3 60 aa3.13□□□□□ -1.91
HMGB3P19-201ENST00000403971 WFDC1Q9HC57 220 aa3.13□□□□□ -1.91
HMGB3P19-201ENST00000403971 KCNIP2Q9NS61 270 aa3.13□□□□□ -1.91
HMGB3P19-201ENST00000403971 C21orf62Q9NYP8 219 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms