RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 SCO1O75880 301 aa18.44■□□□□ 0.54
ECHDC3-201ENST00000379215 RNF212Q495C1 297 aa18.44■□□□□ 0.54
ECHDC3-201ENST00000379215 CD300EQ496F6 205 aaPredicted RBP18.44■□□□□ 0.54
ECHDC3-201ENST00000379215 C9orf47Q6ZRZ4 202 aa18.44■□□□□ 0.54
ECHDC3-201ENST00000379215 TEP1Q99973 2627 aaKnown RBP18.44■□□□□ 0.54
ECHDC3-201ENST00000379215 CXorf65A6NEN9 183 aa18.43■□□□□ 0.54
ECHDC3-201ENST00000379215 C15orf54Q8N8G6 183 aa18.43■□□□□ 0.54
ECHDC3-201ENST00000379215 VGLL1Q99990 258 aa18.43■□□□□ 0.54
ECHDC3-201ENST00000379215 PPP1R14DQ9NXH3 145 aa18.43■□□□□ 0.54
ECHDC3-201ENST00000379215 NHLRC2Q8NBF2 726 aa18.42■□□□□ 0.54
ECHDC3-201ENST00000379215 LINC00477Q96M19 166 aa18.42■□□□□ 0.54
ECHDC3-201ENST00000379215 LENEPQ9Y5L5 61 aa18.42■□□□□ 0.54
ECHDC3-201ENST00000379215 H7BYZ3 331 aa18.41■□□□□ 0.54
ECHDC3-201ENST00000379215 ZNF138P52744 262 aa18.41■□□□□ 0.54
ECHDC3-201ENST00000379215 ERVFC1-1P60608 527 aa18.41■□□□□ 0.54
ECHDC3-201ENST00000379215 OR10G8Q8NGN5 311 aa18.41■□□□□ 0.54
ECHDC3-201ENST00000379215 TUBA4BQ9H853 241 aa18.41■□□□□ 0.54
ECHDC3-201ENST00000379215 OSTCQ9NRP0 149 aa18.41■□□□□ 0.54
ECHDC3-201ENST00000379215 ZNF688P0C7X2 276 aa18.41■□□□□ 0.54
ECHDC3-201ENST00000379215 CT45A10P0DMU9 189 aa18.41■□□□□ 0.54
ECHDC3-201ENST00000379215 PSMG4Q5JS54 123 aa18.41■□□□□ 0.54
ECHDC3-201ENST00000379215 FAM231DQ6ZW35 169 aa18.41■□□□□ 0.54
ECHDC3-201ENST00000379215 COX8CQ7Z4L0 72 aa18.41■□□□□ 0.54
ECHDC3-201ENST00000379215 OR8A1Q8NGG7 326 aa18.41■□□□□ 0.54
ECHDC3-201ENST00000379215 PRR25Q96S07 402 aa18.41■□□□□ 0.54
ECHDC3-201ENST00000379215 NPIPB6E9PJ23 425 aa18.4■□□□□ 0.54
ECHDC3-201ENST00000379215 BTN1A1Q13410 526 aa18.4■□□□□ 0.54
ECHDC3-201ENST00000379215 ZNF492Q9P255 531 aa18.4■□□□□ 0.54
ECHDC3-201ENST00000379215 IGLV1-51P01701 117 aa18.39■□□□□ 0.53
ECHDC3-201ENST00000379215 OR5I1Q13606 314 aa18.39■□□□□ 0.53
ECHDC3-201ENST00000379215 IBA57Q5T440 356 aaKnown RBP18.39■□□□□ 0.53
ECHDC3-201ENST00000379215 C3orf56Q8N813 242 aa18.39■□□□□ 0.53
ECHDC3-201ENST00000379215 AGPAT4-IT1Q9H0P7 198 aa18.39■□□□□ 0.53
ECHDC3-201ENST00000379215 INSL3P51460 131 aa18.38■□□□□ 0.53
ECHDC3-201ENST00000379215 SHISA2Q6UWI4 295 aa18.38■□□□□ 0.53
ECHDC3-201ENST00000379215 C12orf54Q6X4T0 127 aa18.38■□□□□ 0.53
ECHDC3-201ENST00000379215 TRBV7-9A0A0J9YWB2 115 aa18.38■□□□□ 0.53
ECHDC3-201ENST00000379215 HIST1H1AQ02539 215 aaPredicted RBP18.38■□□□□ 0.53
ECHDC3-201ENST00000379215 ERCC8Q13216 396 aa18.38■□□□□ 0.53
ECHDC3-201ENST00000379215 EBLN2Q6P2I7 272 aa18.38■□□□□ 0.53
ECHDC3-201ENST00000379215 TMEM88Q6PEY1 159 aa18.38■□□□□ 0.53
ECHDC3-201ENST00000379215 FAM24BQ8N5W8 94 aa18.38■□□□□ 0.53
ECHDC3-201ENST00000379215 DAZAP1Q96EP5 407 aaKnown RBP18.38■□□□□ 0.53
ECHDC3-201ENST00000379215 CMC4P56277 68 aaPredicted RBP18.37■□□□□ 0.53
ECHDC3-201ENST00000379215 PRR27Q6MZM9 219 aa18.37■□□□□ 0.53
ECHDC3-201ENST00000379215 FOXI2Q6ZQN5 318 aa18.37■□□□□ 0.53
ECHDC3-201ENST00000379215 CBLN2Q8IUK8 224 aa18.37■□□□□ 0.53
ECHDC3-201ENST00000379215 Q8TAT8 98 aa18.37■□□□□ 0.53
ECHDC3-201ENST00000379215 SMUG1Q53HV7 270 aa18.36■□□□□ 0.53
ECHDC3-201ENST00000379215 IMMP2LQ96T52 175 aa18.36■□□□□ 0.53
ECHDC3-201ENST00000379215 MCRIP2Q9BUT9 160 aaKnown RBP18.36■□□□□ 0.53
ECHDC3-201ENST00000379215 DUSP14O95147 198 aaKnown RBP18.35■□□□□ 0.53
ECHDC3-201ENST00000379215 PRB4P10163 310 aaPredicted RBP18.35■□□□□ 0.53
ECHDC3-201ENST00000379215 ZC2HC1AQ96GY0 325 aa18.35■□□□□ 0.53
ECHDC3-201ENST00000379215 S100PP25815 95 aa18.34■□□□□ 0.53
ECHDC3-201ENST00000379215 C9orf66Q5T8R8 295 aa18.34■□□□□ 0.53
ECHDC3-201ENST00000379215 RNASE7Q9H1E1 156 aaKnown RBP18.34■□□□□ 0.53
ECHDC3-201ENST00000379215 ZNF256Q9Y2P7 627 aaPredicted RBP18.34■□□□□ 0.53
ECHDC3-201ENST00000379215 ODF3Q96PU9 254 aa18.34■□□□□ 0.53
ECHDC3-201ENST00000379215 SAV1Q9H4B6 383 aaPredicted RBP18.34■□□□□ 0.53
ECHDC3-201ENST00000379215 A0A0J9YX75 114 aa18.33■□□□□ 0.52
ECHDC3-201ENST00000379215 ZNF705GA8MUZ8 300 aaPredicted RBP18.33■□□□□ 0.52
ECHDC3-201ENST00000379215 P01737 135 aa18.33■□□□□ 0.52
ECHDC3-201ENST00000379215 FAM162BQ5T6X4 162 aa18.33■□□□□ 0.52
ECHDC3-201ENST00000379215 KCNIP4Q6PIL6 250 aa18.33■□□□□ 0.52
ECHDC3-201ENST00000379215 OR4B1Q8NGF8 309 aa18.33■□□□□ 0.52
ECHDC3-201ENST00000379215 C8orf49Q96NF6 230 aa18.33■□□□□ 0.52
ECHDC3-201ENST00000379215 GPR61Q9BZJ8 451 aa18.33■□□□□ 0.52
ECHDC3-201ENST00000379215 C19orf71A6NCJ1 209 aa18.32■□□□□ 0.52
ECHDC3-201ENST00000379215 GATCO43716 136 aaKnown RBP18.32■□□□□ 0.52
ECHDC3-201ENST00000379215 NUDT10Q8NFP7 164 aa18.32■□□□□ 0.52
ECHDC3-201ENST00000379215 NUDT11Q96G61 164 aa18.32■□□□□ 0.52
ECHDC3-201ENST00000379215 V9GYV3 84 aa18.32■□□□□ 0.52
ECHDC3-201ENST00000379215 IZUMO1RA6ND01 250 aa18.31■□□□□ 0.52
ECHDC3-201ENST00000379215 F6UB75 175 aa18.31■□□□□ 0.52
ECHDC3-201ENST00000379215 DEFB131AP59861 70 aa18.31■□□□□ 0.52
ECHDC3-201ENST00000379215 CT83Q5H943 113 aa18.31■□□□□ 0.52
ECHDC3-201ENST00000379215 ASCL2Q99929 193 aa18.31■□□□□ 0.52
ECHDC3-201ENST00000379215 MAP6D1Q9H9H5 199 aa18.31■□□□□ 0.52
ECHDC3-201ENST00000379215 ATRQ13535 2644 aa18.31■□□□□ 0.52
ECHDC3-201ENST00000379215 ZNF705DP0CH99 300 aaPredicted RBP18.31■□□□□ 0.52
ECHDC3-201ENST00000379215 ZNF705BP0CI00 300 aaPredicted RBP18.31■□□□□ 0.52
ECHDC3-201ENST00000379215 CD33P20138 364 aa18.31■□□□□ 0.52
ECHDC3-201ENST00000379215 FAM110AQ9BQ89 295 aa18.31■□□□□ 0.52
ECHDC3-201ENST00000379215 WFDC9Q8NEX5 89 aa18.3■□□□□ 0.52
ECHDC3-201ENST00000379215 BTF3L4Q96K17 158 aa18.3■□□□□ 0.52
ECHDC3-201ENST00000379215 FAM19A4Q96LR4 140 aa18.3■□□□□ 0.52
ECHDC3-201ENST00000379215 RPP21Q9H633 154 aaKnown RBP18.3■□□□□ 0.52
ECHDC3-201ENST00000379215 IL36BQ9NZH7 164 aa18.3■□□□□ 0.52
ECHDC3-201ENST00000379215 CRISP2P16562 243 aa18.29■□□□□ 0.52
ECHDC3-201ENST00000379215 WNK1Q9H4A3 2382 aa18.28■□□□□ 0.52
ECHDC3-201ENST00000379215 DEFB1P60022 68 aa18.28■□□□□ 0.52
ECHDC3-201ENST00000379215 LINC00322Q6ZN03 302 aaPredicted RBP18.28■□□□□ 0.52
ECHDC3-201ENST00000379215 FABP5P3A8MUU1 101 aa18.27■□□□□ 0.52
ECHDC3-201ENST00000379215 OR11H12B2RN74 326 aa18.27■□□□□ 0.52
ECHDC3-201ENST00000379215 HLA-DRB4P13762 266 aa18.27■□□□□ 0.52
ECHDC3-201ENST00000379215 LEPP41159 167 aa18.27■□□□□ 0.52
ECHDC3-201ENST00000379215 HLA-DRB4X5D2U9 266 aa18.27■□□□□ 0.52
ECHDC3-201ENST00000379215 PFN1P07737 140 aaKnown RBP18.27■□□□□ 0.51
ECHDC3-201ENST00000379215 TSPOP30536 169 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms