RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 MFNGO00587 321 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 PSPHP1O15172 72 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 TGOLN2O43493 480 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 CDK1P06493 297 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 S100A9P06702 114 aaKnown RBP3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 CTSGP08311 255 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 PTHLHP12272 177 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 MYL12AP19105 171 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 NFYAP23511 347 aaPredicted RBP3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 SERPINB10P48595 397 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 TCTAP57738 103 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 TAS2R43P59537 309 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 WT1-ASQ06250 92 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 MOBPQ13875 183 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 C12orf74Q32Q52 190 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 COX19Q49B96 90 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 HSD17B12Q53GQ0 312 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 RBM48Q5RL73 367 aaKnown RBP3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 Q6ZS49 121 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 AHSA2Q719I0 299 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 OR10J5Q8NHC4 309 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 ENKURQ8TC29 256 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 CYGBQ8WWM9 190 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 TMEM203Q969S6 136 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 ADTRPQ96IZ2 230 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 OR2A7Q96R45 310 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 DCUN1D5Q9BTE7 237 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 C9orf16Q9BUW7 83 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 MAP1LC3CQ9BXW4 147 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 SMPXQ9UHP9 88 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 VAX2Q9UIW0 290 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 UFC1Q9Y3C8 167 aa3.24□□□□□ -1.89
RNU4-39P-201ENST00000362455 IRGMA1A4Y4 181 aa3.23□□□□□ -1.89
RNU4-39P-201ENST00000362455 OR4C46A6NHA9 309 aa3.23□□□□□ -1.89
RNU4-39P-201ENST00000362455 DENRO43583 198 aaKnown RBP3.23□□□□□ -1.89
RNU4-39P-201ENST00000362455 HIST1H1DP16402 221 aaKnown RBP3.23□□□□□ -1.89
RNU4-39P-201ENST00000362455 HLA-GP17693 338 aa3.23□□□□□ -1.89
RNU4-39P-201ENST00000362455 GNRHRP30968 328 aa3.23□□□□□ -1.89
RNU4-39P-201ENST00000362455 PSMD7P51665 324 aa3.23□□□□□ -1.89
RNU4-39P-201ENST00000362455 OR10A3P58181 314 aa3.23□□□□□ -1.89
RNU4-39P-201ENST00000362455 RPS25P62851 125 aaKnown RBP3.23□□□□□ -1.89
RNU4-39P-201ENST00000362455 TPBGQ13641 420 aa3.23□□□□□ -1.89
RNU4-39P-201ENST00000362455 LGALS9BQ3B8N2 356 aa3.23□□□□□ -1.89
RNU4-39P-201ENST00000362455 ZNF767PQ75MW2 155 aa3.23□□□□□ -1.89
RNU4-39P-201ENST00000362455 LINC00469Q8N7U9 141 aa3.23□□□□□ -1.89
RNU4-39P-201ENST00000362455 ZNF709Q8N972 641 aa3.23□□□□□ -1.89
RNU4-39P-201ENST00000362455 OR4A5Q8NH83 315 aa3.23□□□□□ -1.89
RNU4-39P-201ENST00000362455 RHPN1-AS1Q9BWJ2 59 aa3.23□□□□□ -1.89
RNU4-39P-201ENST00000362455 DAZ1Q9NQZ3 744 aaKnown RBP3.23□□□□□ -1.89
RNU4-39P-201ENST00000362455 TAS2R8Q9NYW2 309 aa3.23□□□□□ -1.89
RNU4-39P-201ENST00000362455 MUC4Q99102 2169 aa3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 DMBT1Q9UGM3 2413 aaPredicted RBP3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 IGKV3-7A0A075B6H7 116 aa3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 IGLV2-18A0A075B6J9 118 aa3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 TEX50A0A1B0GTY4 177 aa3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 COLCA2A8K830 154 aa3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 NDUFA4O00483 81 aa3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 UPK2O00526 184 aa3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 IGLV2-8P01709 118 aa3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 OR13C7P0DN81 318 aa3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 DEFA4P12838 97 aa3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 HIST1H1BP16401 226 aaKnown RBP3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 CRHBPP24387 322 aa3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 TAS2R60P59551 318 aa3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 FABP5Q01469 135 aa3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 LAMTOR1Q6IAA8 161 aa3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 SLC7A5P1Q8MH63 180 aa3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 ZNF555Q8NEP9 628 aa3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 BPIFB6Q8NFQ5 453 aa3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 OR1S1Q8NH92 325 aa3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 GINS4Q9BRT9 223 aa3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 NDUFA4L2Q9NRX3 87 aa3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 BET1LQ9NYM9 111 aa3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 C21orf62Q9NYP8 219 aa3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 RAB22AQ9UL26 194 aa3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 PRELID3BQ9Y3B1 194 aa3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 RBM7Q9Y580 266 aaKnown RBP3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 V9GYY9 64 aa3.22□□□□□ -1.89
RNU4-39P-201ENST00000362455 TRAV10A0A0B4J240 114 aa3.21□□□□□ -1.9
RNU4-39P-201ENST00000362455 TRAV8-4A0A0B4J246 113 aa3.21□□□□□ -1.9
RNU4-39P-201ENST00000362455 KNCNA6PVL3 124 aa3.21□□□□□ -1.9
RNU4-39P-201ENST00000362455 I3L2K1 104 aa3.21□□□□□ -1.9
RNU4-39P-201ENST00000362455 SULT1C2O00338 296 aa3.21□□□□□ -1.9
RNU4-39P-201ENST00000362455 MYL12BO14950 172 aa3.21□□□□□ -1.9
RNU4-39P-201ENST00000362455 CREBL2O60519 120 aaPredicted RBP3.21□□□□□ -1.9
RNU4-39P-201ENST00000362455 ATP5HO75947 161 aa3.21□□□□□ -1.9
RNU4-39P-201ENST00000362455 P01737 135 aa3.21□□□□□ -1.9
RNU4-39P-201ENST00000362455 MAP2K4P45985 399 aa3.21□□□□□ -1.9
RNU4-39P-201ENST00000362455 GALR1P47211 349 aa3.21□□□□□ -1.9
RNU4-39P-201ENST00000362455 DEFB131AP59861 70 aa3.21□□□□□ -1.9
RNU4-39P-201ENST00000362455 CDNFQ49AH0 187 aa3.21□□□□□ -1.9
RNU4-39P-201ENST00000362455 TCF24Q7RTU0 167 aa3.21□□□□□ -1.9
RNU4-39P-201ENST00000362455 GDPD1Q8N9F7 314 aa3.21□□□□□ -1.9
RNU4-39P-201ENST00000362455 VSTM2AQ8TAG5 236 aa3.21□□□□□ -1.9
RNU4-39P-201ENST00000362455 DGCR14Q96DF8 476 aaKnown RBP3.21□□□□□ -1.9
RNU4-39P-201ENST00000362455 CHCHD7Q9BUK0 85 aa3.21□□□□□ -1.9
RNU4-39P-201ENST00000362455 MS4A6AQ9H2W1 248 aa3.21□□□□□ -1.9
RNU4-39P-201ENST00000362455 VSIRQ9H7M9 311 aa3.21□□□□□ -1.9
RNU4-39P-201ENST00000362455 CBY1Q9Y3M2 126 aa3.21□□□□□ -1.9
RNU4-39P-201ENST00000362455 DEFB131BA0A096LNP1 70 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms