RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 SLC25A16P16260 332 aa15.12■□□□□ 0.01
NPLOC4-201ENST00000331134 NEGR1Q7Z3B1 354 aa15.12■□□□□ 0.01
NPLOC4-201ENST00000331134 DPH3P1Q9H4G8 78 aa15.12■□□□□ 0.01
NPLOC4-201ENST00000331134 A0A0G2JNJ9 132 aa15.12■□□□□ 0.01
NPLOC4-201ENST00000331134 FAM120AOSQ5T036 256 aa15.12■□□□□ 0.01
NPLOC4-201ENST00000331134 Q9UFV3 132 aa15.12■□□□□ 0.01
NPLOC4-201ENST00000331134 M0R2P5 195 aa15.12■□□□□ 0.01
NPLOC4-201ENST00000331134 CT83Q5H943 113 aa15.12■□□□□ 0.01
NPLOC4-201ENST00000331134 NDUFB8O95169 186 aa15.12■□□□□ 0.01
NPLOC4-201ENST00000331134 IGFBPL1Q8WX77 278 aa15.12■□□□□ 0.01
NPLOC4-201ENST00000331134 COPS9Q8WXC6 57 aa15.12■□□□□ 0.01
NPLOC4-201ENST00000331134 ALPK3Q96L96 1907 aa15.11■□□□□ 0.01
NPLOC4-201ENST00000331134 SPXQ9BT56 116 aa15.11■□□□□ 0.01
NPLOC4-201ENST00000331134 TRAV41A0A0B4J266 112 aa15.11■□□□□ 0.01
NPLOC4-201ENST00000331134 ZNF625Q96I27 306 aaPredicted RBP15.11■□□□□ 0.01
NPLOC4-201ENST00000331134 TLN2Q9Y4G6 2542 aa15.11■□□□□ 0.01
NPLOC4-201ENST00000331134 A0A1W2PRX2 142 aa15.11■□□□□ 0.01
NPLOC4-201ENST00000331134 SPRY2O43597 315 aa15.11■□□□□ 0.01
NPLOC4-201ENST00000331134 THBDP07204 575 aa15.11■□□□□ 0.01
NPLOC4-201ENST00000331134 K7EP34 96 aa15.1■□□□□ 0.01
NPLOC4-201ENST00000331134 UCNP55089 124 aa15.1■□□□□ 0.01
NPLOC4-201ENST00000331134 C3orf36Q3SXR2 165 aa15.1■□□□□ 0.01
NPLOC4-201ENST00000331134 C2orf82Q6UX34 121 aa15.1■□□□□ 0.01
NPLOC4-201ENST00000331134 IL17RELQ6ZVW7 336 aa15.1■□□□□ 0.01
NPLOC4-201ENST00000331134 TTTY13Q9BZ97 58 aa15.1■□□□□ 0.01
NPLOC4-201ENST00000331134 TANC2Q9HCD6 1990 aa15.1■□□□□ 0.01
NPLOC4-201ENST00000331134 MBD3L4A6NDZ8 208 aaPredicted RBP15.1■□□□□ 0.01
NPLOC4-201ENST00000331134 MBD3L3A6NE82 208 aaPredicted RBP15.1■□□□□ 0.01
NPLOC4-201ENST00000331134 MBD3L5A6NJ08 208 aaPredicted RBP15.1■□□□□ 0.01
NPLOC4-201ENST00000331134 MBD3L2Q8NHZ7 208 aaPredicted RBP15.1■□□□□ 0.01
NPLOC4-201ENST00000331134 ZNF747Q9BV97 191 aa15.1■□□□□ 0.01
NPLOC4-201ENST00000331134 TRGV2A0A075B6R0 118 aa15.1■□□□□ 0.01
NPLOC4-201ENST00000331134 A0A1W2PPM0 123 aa15.1■□□□□ 0.01
NPLOC4-201ENST00000331134 ZNF562Q6V9R5 426 aa15.1■□□□□ 0.01
NPLOC4-201ENST00000331134 NAV3Q8IVL0 2385 aa15.1■□□□□ 0.01
NPLOC4-201ENST00000331134 IGHG3P01860 377 aa15.1■□□□□ 0.01
NPLOC4-201ENST00000331134 C2orf66Q6UXQ4 117 aa15.1■□□□□ 0.01
NPLOC4-201ENST00000331134 TICRRQ7Z2Z1 1910 aa15.09■□□□□ 0.01
NPLOC4-201ENST00000331134 PRR25Q96S07 402 aa15.09■□□□□ 0.01
NPLOC4-201ENST00000331134 HLA-DMBP28068 263 aa15.09■□□□□ 0.01
NPLOC4-201ENST00000331134 TMEM101Q96IK0 257 aa15.09■□□□□ 0.01
NPLOC4-201ENST00000331134 OVOL1O14753 267 aa15.09■□□□□ 0.01
NPLOC4-201ENST00000331134 TRAV8-3A0A0A6YYJ7 113 aa15.08■□□□□ 0.01
NPLOC4-201ENST00000331134 ANKRD39Q53RE8 183 aa15.08■□□□□ 0
NPLOC4-201ENST00000331134 C11orf53Q8IXP5 236 aa15.08■□□□□ 0
NPLOC4-201ENST00000331134 TMEM238C9JI98 176 aa15.08■□□□□ 0
NPLOC4-201ENST00000331134 G3V318 75 aa15.08■□□□□ 0
NPLOC4-201ENST00000331134 AZU1P20160 251 aa15.08■□□□□ 0
NPLOC4-201ENST00000331134 LINC01559Q495D7 138 aa15.08■□□□□ 0
NPLOC4-201ENST00000331134 DEFB125Q8N687 156 aa15.08■□□□□ 0
NPLOC4-201ENST00000331134 NUP37Q8NFH4 326 aa15.08■□□□□ 0
NPLOC4-201ENST00000331134 SRSF8Q9BRL6 282 aaKnown RBP15.08■□□□□ 0
NPLOC4-201ENST00000331134 IGHV2-70DA0A0C4DH43 119 aa15.07■□□□□ 0
NPLOC4-201ENST00000331134 PRSS46E5RG02 174 aa15.07■□□□□ 0
NPLOC4-201ENST00000331134 VGLL1Q99990 258 aa15.07■□□□□ 0
NPLOC4-201ENST00000331134 GATA1P15976 413 aaPredicted RBP15.07■□□□□ 0
NPLOC4-201ENST00000331134 LGALS9BQ3B8N2 356 aa15.07■□□□□ 0
NPLOC4-201ENST00000331134 SPRNQ5BIV9 151 aa15.07■□□□□ 0
NPLOC4-201ENST00000331134 LGALS9CQ6DKI2 356 aa15.07■□□□□ 0
NPLOC4-201ENST00000331134 E7EQL1 145 aa15.07■□□□□ 0
NPLOC4-201ENST00000331134 IGLC1P0CG04 106 aa15.07■□□□□ 0
NPLOC4-201ENST00000331134 CCL19Q99731 98 aa15.07■□□□□ 0
NPLOC4-201ENST00000331134 VCYO14598 125 aa15.06■□□□□ 0
NPLOC4-201ENST00000331134 NDUFS7O75251 213 aa15.06■□□□□ 0
NPLOC4-201ENST00000331134 SH2D6Q7Z4S9 175 aa15.06■□□□□ 0
NPLOC4-201ENST00000331134 KNCNA6PVL3 124 aa15.06■□□□□ 0
NPLOC4-201ENST00000331134 LOXP28300 417 aaPredicted RBP15.06■□□□□ 0
NPLOC4-201ENST00000331134 PDE6HQ13956 83 aa15.06■□□□□ 0
NPLOC4-201ENST00000331134 GAGE12HA6NDE8 117 aa15.05■□□□□ 0
NPLOC4-201ENST00000331134 ZNF833PQ6ZTB9 187 aa15.05■□□□□ 0
NPLOC4-201ENST00000331134 TP53TG1Q9Y2A0 90 aa15.05■□□□□ 0
NPLOC4-201ENST00000331134 CDKN1BP46527 198 aa15.05■□□□□ -0
NPLOC4-201ENST00000331134 Q6ZPA2 131 aa15.05■□□□□ -0
NPLOC4-201ENST00000331134 C9orf139Q6ZV77 190 aa15.05■□□□□ -0
NPLOC4-201ENST00000331134 LINC00477Q96M19 166 aa15.05■□□□□ -0
NPLOC4-201ENST00000331134 IGLV3-9A0A075B6K5 115 aa15.05■□□□□ -0
NPLOC4-201ENST00000331134 TEX48A0A1B0GUV7 120 aa15.05■□□□□ -0
NPLOC4-201ENST00000331134 TP73-AS1Q9UF72 201 aa15.05■□□□□ -0
NPLOC4-201ENST00000331134 IGF2RP11717 2491 aa15.04■□□□□ -0
NPLOC4-201ENST00000331134 DKK1O94907 266 aa15.04■□□□□ -0
NPLOC4-201ENST00000331134 ATXN8Q156A1 80 aa15.04■□□□□ -0
NPLOC4-201ENST00000331134 PRADC1Q9BSG0 188 aa15.04■□□□□ -0
NPLOC4-201ENST00000331134 PHLDA1Q8WV24 401 aaPredicted RBP15.04■□□□□ -0
NPLOC4-201ENST00000331134 RNF5Q99942 180 aa15.04■□□□□ -0
NPLOC4-201ENST00000331134 DTX2Q86UW9 622 aa15.04■□□□□ -0
NPLOC4-201ENST00000331134 H3BUX3 64 aa15.03■□□□□ -0
NPLOC4-201ENST00000331134 IGKV1OR2-108A0A075B7D4 117 aa15.03■□□□□ -0
NPLOC4-201ENST00000331134 OVOL3O00110 214 aa15.03■□□□□ -0
NPLOC4-201ENST00000331134 C11orf68Q9H3H3 251 aaKnown RBP15.03■□□□□ -0
NPLOC4-201ENST00000331134 HIVEP3Q5T1R4 2406 aa15.03■□□□□ -0
NPLOC4-201ENST00000331134 IGHV3-53P01767 116 aa15.03■□□□□ -0
NPLOC4-201ENST00000331134 RHPN1-AS1Q9BWJ2 59 aa15.03■□□□□ -0
NPLOC4-201ENST00000331134 C1orf159Q96HA4 380 aa15.03■□□□□ -0
NPLOC4-201ENST00000331134 ODF3L1Q8IXM7 274 aa15.02■□□□□ -0
NPLOC4-201ENST00000331134 TANC1Q9C0D5 1861 aa15.02■□□□□ -0
NPLOC4-201ENST00000331134 ANXA2RQ3ZCQ2 193 aa15.02■□□□□ -0
NPLOC4-201ENST00000331134 PRRC2CQ9Y520 2896 aaKnown RBP15.02□□□□□ -0.01
NPLOC4-201ENST00000331134 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.02□□□□□ -0.01
NPLOC4-201ENST00000331134 MSRB1Q9NZV6 116 aa15.02□□□□□ -0.01
NPLOC4-201ENST00000331134 PATE2Q6UY27 113 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms