RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 CRLF1O75462 422 aa16.78■□□□□ 0.28
RNF40-201ENST00000324685 RMI2Q96E14 147 aa16.78■□□□□ 0.28
RNF40-201ENST00000324685 C20orf78Q9BR46 151 aa16.78■□□□□ 0.28
RNF40-201ENST00000324685 MORN5Q5VZ52 161 aa16.78■□□□□ 0.28
RNF40-201ENST00000324685 DOCK6Q96HP0 2047 aa16.77■□□□□ 0.28
RNF40-201ENST00000324685 GAGE6Q13070 117 aa16.77■□□□□ 0.28
RNF40-201ENST00000324685 GAGE7O76087 117 aa16.77■□□□□ 0.28
RNF40-201ENST00000324685 IGKV1-39P01597 117 aa16.77■□□□□ 0.28
RNF40-201ENST00000324685 IGKV1D-39P04432 117 aa16.77■□□□□ 0.28
RNF40-201ENST00000324685 GAGE12FP0CL80 117 aa16.77■□□□□ 0.28
RNF40-201ENST00000324685 GAGE12GP0CL81 117 aa16.77■□□□□ 0.28
RNF40-201ENST00000324685 GAGE12IP0CL82 117 aa16.77■□□□□ 0.28
RNF40-201ENST00000324685 LOXP28300 417 aaPredicted RBP16.77■□□□□ 0.28
RNF40-201ENST00000324685 K7EM74 188 aa16.77■□□□□ 0.27
RNF40-201ENST00000324685 Q6ZR03 302 aa16.77■□□□□ 0.27
RNF40-201ENST00000324685 SCRT2Q9NQ03 307 aa16.77■□□□□ 0.27
RNF40-201ENST00000324685 SIVA1O15304 175 aa16.77■□□□□ 0.27
RNF40-201ENST00000324685 ZNF134P52741 427 aa16.77■□□□□ 0.27
RNF40-201ENST00000324685 XIRP1Q702N8 1843 aaKnown RBP16.77■□□□□ 0.27
RNF40-201ENST00000324685 F8VRH5 84 aa16.76■□□□□ 0.27
RNF40-201ENST00000324685 DSCR8Q96T75 97 aa16.76■□□□□ 0.27
RNF40-201ENST00000324685 J3QLI3 93 aa16.76■□□□□ 0.27
RNF40-201ENST00000324685 C1orf147Q96MC9 270 aaPredicted RBP16.76■□□□□ 0.27
RNF40-201ENST00000324685 FREM3P0C091 2139 aa16.76■□□□□ 0.27
RNF40-201ENST00000324685 SP5Q6BEB4 398 aaPredicted RBP16.76■□□□□ 0.27
RNF40-201ENST00000324685 C11orf52Q96A22 123 aa16.76■□□□□ 0.27
RNF40-201ENST00000324685 MRPL35Q9NZE8 188 aaKnown RBP16.76■□□□□ 0.27
RNF40-201ENST00000324685 A0A1W2PPM0 123 aa16.76■□□□□ 0.27
RNF40-201ENST00000324685 IFITM1P13164 125 aa16.76■□□□□ 0.27
RNF40-201ENST00000324685 TCTEX1D4Q5JR98 221 aa16.76■□□□□ 0.27
RNF40-201ENST00000324685 BVES-AS1Q5T3Y7 98 aa16.76■□□□□ 0.27
RNF40-201ENST00000324685 ZC2HC1AQ96GY0 325 aa16.75■□□□□ 0.27
RNF40-201ENST00000324685 APC2O95996 2303 aa16.75■□□□□ 0.27
RNF40-201ENST00000324685 NPYP01303 97 aa16.75■□□□□ 0.27
RNF40-201ENST00000324685 IGLL1P15814 213 aa16.75■□□□□ 0.27
RNF40-201ENST00000324685 KLF5Q13887 457 aaPredicted RBP16.75■□□□□ 0.27
RNF40-201ENST00000324685 HAMPP81172 84 aa16.75■□□□□ 0.27
RNF40-201ENST00000324685 IGHV3-38A0A0C4DH36 116 aa16.75■□□□□ 0.27
RNF40-201ENST00000324685 K7EP13 123 aa16.75■□□□□ 0.27
RNF40-201ENST00000324685 WDR86Q86TI4 376 aa16.74■□□□□ 0.27
RNF40-201ENST00000324685 ABCA7Q8IZY2 2146 aa16.74■□□□□ 0.27
RNF40-201ENST00000324685 C15orf65H3BRN8 121 aa16.74■□□□□ 0.27
RNF40-201ENST00000324685 TRAV25A0A0B4J276 109 aa16.74■□□□□ 0.27
RNF40-201ENST00000324685 FXYD5Q96DB9 178 aa16.74■□□□□ 0.27
RNF40-201ENST00000324685 CARD19Q96LW7 228 aa16.74■□□□□ 0.27
RNF40-201ENST00000324685 TRAV12-2A0A075B6T6 113 aa16.73■□□□□ 0.27
RNF40-201ENST00000324685 WT1-ASQ06250 92 aa16.73■□□□□ 0.27
RNF40-201ENST00000324685 VOPP1Q96AW1 172 aa16.73■□□□□ 0.27
RNF40-201ENST00000324685 NXPH4O95158 308 aa16.73■□□□□ 0.27
RNF40-201ENST00000324685 HLA-DMBP28068 263 aa16.73■□□□□ 0.27
RNF40-201ENST00000324685 TET1Q8NFU7 2136 aa16.73■□□□□ 0.27
RNF40-201ENST00000324685 E9PQ18 207 aa16.73■□□□□ 0.27
RNF40-201ENST00000324685 VWC2Q2TAL6 325 aa16.73■□□□□ 0.27
RNF40-201ENST00000324685 ESPL1Q14674 2120 aa16.73■□□□□ 0.27
RNF40-201ENST00000324685 IGHV7-4-1A0A0J9YVY3 117 aa16.73■□□□□ 0.27
RNF40-201ENST00000324685 J3QQQ9 107 aa16.73■□□□□ 0.27
RNF40-201ENST00000324685 CITED2Q99967 270 aaPredicted RBP16.73■□□□□ 0.27
RNF40-201ENST00000324685 TRACP01848 142 aa16.72■□□□□ 0.27
RNF40-201ENST00000324685 K7ENP7 123 aa16.72■□□□□ 0.27
RNF40-201ENST00000324685 AHCTF1Q8WYP5 2266 aa16.72■□□□□ 0.27
RNF40-201ENST00000324685 IGFL3Q6UXB1 125 aa16.72■□□□□ 0.27
RNF40-201ENST00000324685 ETDBQ3ZM63 59 aa16.71■□□□□ 0.27
RNF40-201ENST00000324685 IGHV2-70P01814 119 aa16.71■□□□□ 0.27
RNF40-201ENST00000324685 H3BUA1 57 aa16.71■□□□□ 0.27
RNF40-201ENST00000324685 LTAP01374 205 aa16.71■□□□□ 0.27
RNF40-201ENST00000324685 IGHV2-5P01817 119 aa16.71■□□□□ 0.27
RNF40-201ENST00000324685 PRSS29PA6NIE9 313 aa16.7■□□□□ 0.26
RNF40-201ENST00000324685 IGLC1P0CG04 106 aa16.7■□□□□ 0.26
RNF40-201ENST00000324685 DUX4L9Q6RFH8 374 aaPredicted RBP16.7■□□□□ 0.26
RNF40-201ENST00000324685 ALPK2Q86TB3 2170 aa16.69■□□□□ 0.26
RNF40-201ENST00000324685 TPSG1Q9NRR2 321 aa16.69■□□□□ 0.26
RNF40-201ENST00000324685 IGHG4P01861 327 aa16.69■□□□□ 0.26
RNF40-201ENST00000324685 K7EMI3 77 aa16.68■□□□□ 0.26
RNF40-201ENST00000324685 NDUFS7O75251 213 aa16.68■□□□□ 0.26
RNF40-201ENST00000324685 IGLV1-44P01699 117 aa16.68■□□□□ 0.26
RNF40-201ENST00000324685 PRR30Q53SZ7 412 aaPredicted RBP16.68■□□□□ 0.26
RNF40-201ENST00000324685 Q96MF0 132 aa16.68■□□□□ 0.26
RNF40-201ENST00000324685 ATP6V0BQ99437 205 aa16.68■□□□□ 0.26
RNF40-201ENST00000324685 MAJINQ3KP22 176 aa16.68■□□□□ 0.26
RNF40-201ENST00000324685 MRPL53Q96EL3 112 aaKnown RBP16.68■□□□□ 0.26
RNF40-201ENST00000324685 PROK2Q9HC23 129 aa16.68■□□□□ 0.26
RNF40-201ENST00000324685 ELANEP08246 267 aa16.68■□□□□ 0.26
RNF40-201ENST00000324685 RHOHQ15669 191 aa16.68■□□□□ 0.26
RNF40-201ENST00000324685 IGLV3-9A0A075B6K5 115 aa16.67■□□□□ 0.26
RNF40-201ENST00000324685 ZNF493Q6ZR52 646 aa16.67■□□□□ 0.26
RNF40-201ENST00000324685 THADAQ6YHU6 1953 aa16.66■□□□□ 0.26
RNF40-201ENST00000324685 POU2AF1Q16633 256 aa16.66■□□□□ 0.26
RNF40-201ENST00000324685 WIPF2Q8TF74 440 aaPredicted RBP16.66■□□□□ 0.26
RNF40-201ENST00000324685 NPSP0C0P6 89 aa16.66■□□□□ 0.26
RNF40-201ENST00000324685 FOXI2Q6ZQN5 318 aa16.66■□□□□ 0.26
RNF40-201ENST00000324685 SPANXCQ9NY87 97 aa16.66■□□□□ 0.26
RNF40-201ENST00000324685 LRRK1Q38SD2 2015 aa16.66■□□□□ 0.26
RNF40-201ENST00000324685 C8orf31Q8N9H6 132 aa16.66■□□□□ 0.26
RNF40-201ENST00000324685 FAM186AA6NE01 2351 aa16.66■□□□□ 0.26
RNF40-201ENST00000324685 RBAKDNA6NC62 111 aa16.66■□□□□ 0.26
RNF40-201ENST00000324685 GAGE12HA6NDE8 117 aa16.66■□□□□ 0.26
RNF40-201ENST00000324685 ANKRD29Q8N6D5 301 aa16.65■□□□□ 0.26
RNF40-201ENST00000324685 CR1LQ2VPA4 569 aa16.65■□□□□ 0.26
RNF40-201ENST00000324685 PRR20EP86478 221 aa16.65■□□□□ 0.26
RNF40-201ENST00000324685 PRR20CP86479 221 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms