RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 MED13Q9UHV7 2174 aa12.35□□□□□ -0.43
LEMD3-201ENST00000308330 TM4SF5O14894 197 aa12.35□□□□□ -0.43
LEMD3-201ENST00000308330 LAGE3Q14657 143 aa12.35□□□□□ -0.43
LEMD3-201ENST00000308330 C8orf31Q8N9H6 132 aa12.35□□□□□ -0.43
LEMD3-201ENST00000308330 CARD19Q96LW7 228 aa12.35□□□□□ -0.43
LEMD3-201ENST00000308330 WIPF3A6NGB9 483 aa12.35□□□□□ -0.43
LEMD3-201ENST00000308330 IGKV1D-33P01593 117 aa12.35□□□□□ -0.43
LEMD3-201ENST00000308330 IGKV1-33P01594 117 aa12.35□□□□□ -0.43
LEMD3-201ENST00000308330 TMEM158Q8WZ71 300 aa12.35□□□□□ -0.43
LEMD3-201ENST00000308330 TP73-AS1Q9UF72 201 aa12.35□□□□□ -0.43
LEMD3-201ENST00000308330 NAV3Q8IVL0 2385 aa12.35□□□□□ -0.43
LEMD3-201ENST00000308330 K7EN84 100 aa12.34□□□□□ -0.43
LEMD3-201ENST00000308330 UPK2O00526 184 aa12.34□□□□□ -0.43
LEMD3-201ENST00000308330 MORN5Q5VZ52 161 aa12.34□□□□□ -0.43
LEMD3-201ENST00000308330 OTORQ9NRC9 128 aa12.34□□□□□ -0.43
LEMD3-201ENST00000308330 TSC2P49815 1807 aa12.34□□□□□ -0.43
LEMD3-201ENST00000308330 DUSP14O95147 198 aaKnown RBP12.34□□□□□ -0.43
LEMD3-201ENST00000308330 FASNP49327 2511 aaKnown RBP12.34□□□□□ -0.43
LEMD3-201ENST00000308330 TFF1P04155 84 aa12.34□□□□□ -0.43
LEMD3-201ENST00000308330 IGLC6P0CF74 106 aa12.34□□□□□ -0.43
LEMD3-201ENST00000308330 FAM90A1Q86YD7 464 aa12.34□□□□□ -0.43
LEMD3-201ENST00000308330 LINC00312Q9Y6C7 94 aa12.34□□□□□ -0.43
LEMD3-201ENST00000308330 PF4P02776 101 aa12.33□□□□□ -0.44
LEMD3-201ENST00000308330 CRYGSP22914 178 aa12.33□□□□□ -0.44
LEMD3-201ENST00000308330 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.33□□□□□ -0.44
LEMD3-201ENST00000308330 RNF182Q8N6D2 247 aa12.33□□□□□ -0.44
LEMD3-201ENST00000308330 WFDC11Q8NEX6 87 aa12.33□□□□□ -0.44
LEMD3-201ENST00000308330 METRNQ9UJH8 293 aa12.33□□□□□ -0.44
LEMD3-201ENST00000308330 E9PLD3 99 aa12.33□□□□□ -0.44
LEMD3-201ENST00000308330 FAM53AQ6NSI3 398 aaPredicted RBP12.33□□□□□ -0.44
LEMD3-201ENST00000308330 WIPF2Q8TF74 440 aaPredicted RBP12.33□□□□□ -0.44
LEMD3-201ENST00000308330 Q9H3A6 140 aa12.33□□□□□ -0.44
LEMD3-201ENST00000308330 IGKV1-9A0A0C4DH69 117 aa12.33□□□□□ -0.44
LEMD3-201ENST00000308330 K7EMI3 77 aa12.33□□□□□ -0.44
LEMD3-201ENST00000308330 HLA-DRB4P13762 266 aa12.33□□□□□ -0.44
LEMD3-201ENST00000308330 HLA-DRB4X5D2U9 266 aa12.33□□□□□ -0.44
LEMD3-201ENST00000308330 TRGV11A0A075B6L2 103 aa12.33□□□□□ -0.44
LEMD3-201ENST00000308330 C2orf70A6NJV1 201 aa12.33□□□□□ -0.44
LEMD3-201ENST00000308330 LY6HO94772 140 aa12.33□□□□□ -0.44
LEMD3-201ENST00000308330 QRFPP83859 136 aa12.33□□□□□ -0.44
LEMD3-201ENST00000308330 C8orf46Q8TAG6 207 aa12.33□□□□□ -0.44
LEMD3-201ENST00000308330 DKK2Q9UBU2 259 aa12.33□□□□□ -0.44
LEMD3-201ENST00000308330 FRMPD3Q5JV73 1810 aa12.33□□□□□ -0.44
LEMD3-201ENST00000308330 HIVEP3Q5T1R4 2406 aa12.32□□□□□ -0.44
LEMD3-201ENST00000308330 C21orf62Q9NYP8 219 aa12.32□□□□□ -0.44
LEMD3-201ENST00000308330 LYZL4Q96KX0 146 aa12.32□□□□□ -0.44
LEMD3-201ENST00000308330 GFRA4Q9GZZ7 299 aa12.32□□□□□ -0.44
LEMD3-201ENST00000308330 CENPFP49454 3210 aa12.32□□□□□ -0.44
LEMD3-201ENST00000308330 RS1O15537 224 aa12.31□□□□□ -0.44
LEMD3-201ENST00000308330 IGHV3-48P01763 117 aa12.31□□□□□ -0.44
LEMD3-201ENST00000308330 FOXA2Q9Y261 457 aaPredicted RBP12.31□□□□□ -0.44
LEMD3-201ENST00000308330 C17orf98A8MV24 154 aa12.31□□□□□ -0.44
LEMD3-201ENST00000308330 PPP1R17O96001 155 aa12.31□□□□□ -0.44
LEMD3-201ENST00000308330 C3orf36Q3SXR2 165 aa12.31□□□□□ -0.44
LEMD3-201ENST00000308330 TRAV41A0A0B4J266 112 aa12.31□□□□□ -0.44
LEMD3-201ENST00000308330 DSCR9P59020 149 aa12.31□□□□□ -0.44
LEMD3-201ENST00000308330 KIAA1671Q9BY89 1806 aa12.31□□□□□ -0.44
LEMD3-201ENST00000308330 ANKRD11Q6UB99 2663 aaPredicted RBP12.3□□□□□ -0.44
LEMD3-201ENST00000308330 MOB4Q9Y3A3 225 aa12.3□□□□□ -0.44
LEMD3-201ENST00000308330 IFI27L2Q9H2X8 130 aa12.3□□□□□ -0.44
LEMD3-201ENST00000308330 FAM231DQ6ZW35 169 aa12.3□□□□□ -0.44
LEMD3-201ENST00000308330 INSL3P51460 131 aa12.29□□□□□ -0.44
LEMD3-201ENST00000308330 METTL26Q96S19 204 aa12.29□□□□□ -0.44
LEMD3-201ENST00000308330 hADV29S1A0JD25 119 aa12.29□□□□□ -0.44
LEMD3-201ENST00000308330 TRGV3P03979 118 aa12.29□□□□□ -0.44
LEMD3-201ENST00000308330 SLC25A16P16260 332 aa12.29□□□□□ -0.44
LEMD3-201ENST00000308330 SIGLEC15Q6ZMC9 328 aa12.29□□□□□ -0.44
LEMD3-201ENST00000308330 PHLDA3Q9Y5J5 127 aa12.29□□□□□ -0.44
LEMD3-201ENST00000308330 WNK1Q9H4A3 2382 aa12.29□□□□□ -0.44
LEMD3-201ENST00000308330 K7EM74 188 aa12.29□□□□□ -0.44
LEMD3-201ENST00000308330 DTX2Q86UW9 622 aa12.29□□□□□ -0.44
LEMD3-201ENST00000308330 PROK2Q9HC23 129 aa12.29□□□□□ -0.44
LEMD3-201ENST00000308330 ZFYVE26Q68DK2 2539 aa12.29□□□□□ -0.44
LEMD3-201ENST00000308330 LOC107984640A0A0U1RRK4 108 aa12.28□□□□□ -0.44
LEMD3-201ENST00000308330 SRRM5B3KS81 715 aa12.28□□□□□ -0.44
LEMD3-201ENST00000308330 MYO9AB2RTY4 2548 aa12.28□□□□□ -0.44
LEMD3-201ENST00000308330 ZNF462Q96JM2 2506 aa12.28□□□□□ -0.44
LEMD3-201ENST00000308330 TRAV4A0A0B4J268 109 aa12.28□□□□□ -0.44
LEMD3-201ENST00000308330 C11orf52Q96A22 123 aa12.28□□□□□ -0.44
LEMD3-201ENST00000308330 ANAPC10Q9UM13 185 aa12.28□□□□□ -0.44
LEMD3-201ENST00000308330 IGKV1-5P01602 117 aa12.27□□□□□ -0.44
LEMD3-201ENST00000308330 RNASE2P10153 161 aaKnown RBP12.27□□□□□ -0.44
LEMD3-201ENST00000308330 C10orf105Q8TEF2 133 aa12.27□□□□□ -0.44
LEMD3-201ENST00000308330 TMEM133Q9H2Q1 129 aa12.27□□□□□ -0.44
LEMD3-201ENST00000308330 CFC1BP0CG36 223 aa12.27□□□□□ -0.44
LEMD3-201ENST00000308330 CFC1P0CG37 223 aa12.27□□□□□ -0.44
LEMD3-201ENST00000308330 CCL1P22362 96 aa12.27□□□□□ -0.44
LEMD3-201ENST00000308330 LAMTOR3Q9UHA4 124 aa12.27□□□□□ -0.44
LEMD3-201ENST00000308330 IGHV3OR16-13A0A075B7E8 117 aa12.27□□□□□ -0.45
LEMD3-201ENST00000308330 IGHV3-74A0A0B4J1X5 117 aa12.27□□□□□ -0.45
LEMD3-201ENST00000308330 A0A0G2JRQ6 117 aa12.27□□□□□ -0.45
LEMD3-201ENST00000308330 B4DSR2 109 aa12.27□□□□□ -0.45
LEMD3-201ENST00000308330 NDUFS7O75251 213 aa12.27□□□□□ -0.45
LEMD3-201ENST00000308330 RPL35AP18077 110 aaKnown RBP12.27□□□□□ -0.45
LEMD3-201ENST00000308330 TMEM42Q69YG0 159 aa12.27□□□□□ -0.45
LEMD3-201ENST00000308330 OOSP1A8MZH6 123 aa12.27□□□□□ -0.45
LEMD3-201ENST00000308330 PRB1P04280 392 aa12.27□□□□□ -0.45
LEMD3-201ENST00000308330 TP53TG3Q9ULZ0 132 aa12.27□□□□□ -0.45
LEMD3-201ENST00000308330 MRPL35Q9NZE8 188 aaKnown RBP12.26□□□□□ -0.45
LEMD3-201ENST00000308330 LYZL1Q6UWQ5 148 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms