RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 SAP30O75446 220 aa12.24□□□□□ -0.45
SHROOM4-201ENST00000289292 PPDPFLQ8WWR9 84 aa12.24□□□□□ -0.45
SHROOM4-201ENST00000289292 CEP290O15078 2479 aa12.24□□□□□ -0.45
SHROOM4-201ENST00000289292 TMEM86BQ8N661 226 aa12.24□□□□□ -0.45
SHROOM4-201ENST00000289292 MRPL35Q9NZE8 188 aaKnown RBP12.24□□□□□ -0.45
SHROOM4-201ENST00000289292 RASL10AQ92737 203 aa12.24□□□□□ -0.45
SHROOM4-201ENST00000289292 HLA-DMBP28068 263 aa12.24□□□□□ -0.45
SHROOM4-201ENST00000289292 CT83Q5H943 113 aa12.24□□□□□ -0.45
SHROOM4-201ENST00000289292 FGF23Q9GZV9 251 aaPredicted RBP12.24□□□□□ -0.45
SHROOM4-201ENST00000289292 IFITM1P13164 125 aa12.23□□□□□ -0.45
SHROOM4-201ENST00000289292 H3BRN7 92 aa12.23□□□□□ -0.45
SHROOM4-201ENST00000289292 PDE6HQ13956 83 aa12.23□□□□□ -0.45
SHROOM4-201ENST00000289292 RNASE8Q8TDE3 154 aaKnown RBP12.23□□□□□ -0.45
SHROOM4-201ENST00000289292 DIDO1Q9BTC0 2240 aaKnown RBP12.23□□□□□ -0.45
SHROOM4-201ENST00000289292 TRAV12-2A0A075B6T6 113 aa12.23□□□□□ -0.45
SHROOM4-201ENST00000289292 BPESC1Q9GZL8 116 aa12.23□□□□□ -0.45
SHROOM4-201ENST00000289292 K7EMI3 77 aa12.23□□□□□ -0.45
SHROOM4-201ENST00000289292 SPRY2O43597 315 aa12.23□□□□□ -0.45
SHROOM4-201ENST00000289292 CFHR3Q02985 330 aa12.23□□□□□ -0.45
SHROOM4-201ENST00000289292 LEPROTO15243 131 aa12.23□□□□□ -0.45
SHROOM4-201ENST00000289292 SPINK13Q1W4C9 94 aa12.23□□□□□ -0.45
SHROOM4-201ENST00000289292 LGALS9BQ3B8N2 356 aa12.23□□□□□ -0.45
SHROOM4-201ENST00000289292 SPRNQ5BIV9 151 aa12.23□□□□□ -0.45
SHROOM4-201ENST00000289292 LGALS9CQ6DKI2 356 aa12.23□□□□□ -0.45
SHROOM4-201ENST00000289292 FAM231DQ6ZW35 169 aa12.23□□□□□ -0.45
SHROOM4-201ENST00000289292 PIP4P2Q8N4L2 257 aa12.23□□□□□ -0.45
SHROOM4-201ENST00000289292 CITED2Q99967 270 aaPredicted RBP12.23□□□□□ -0.45
SHROOM4-201ENST00000289292 FAM223BA6NKX1 122 aa12.22□□□□□ -0.45
SHROOM4-201ENST00000289292 FAM223AQ8IWN6 122 aa12.22□□□□□ -0.45
SHROOM4-201ENST00000289292 SYNJ2BPP57105 145 aa12.22□□□□□ -0.45
SHROOM4-201ENST00000289292 LINC00173Q6ZV60 143 aa12.22□□□□□ -0.45
SHROOM4-201ENST00000289292 IGHV3-38A0A0C4DH36 116 aa12.22□□□□□ -0.45
SHROOM4-201ENST00000289292 PRIMA1Q86XR5 153 aa12.22□□□□□ -0.45
SHROOM4-201ENST00000289292 FGF6P10767 208 aa12.22□□□□□ -0.45
SHROOM4-201ENST00000289292 DTX2Q86UW9 622 aa12.22□□□□□ -0.45
SHROOM4-201ENST00000289292 PRR25Q96S07 402 aa12.22□□□□□ -0.45
SHROOM4-201ENST00000289292 NDUFS7O75251 213 aa12.21□□□□□ -0.45
SHROOM4-201ENST00000289292 HLA-DRB4P13762 266 aa12.21□□□□□ -0.45
SHROOM4-201ENST00000289292 PLA2G5P39877 138 aa12.21□□□□□ -0.45
SHROOM4-201ENST00000289292 RPL36AP83881 106 aaKnown RBP12.21□□□□□ -0.45
SHROOM4-201ENST00000289292 ANXA2RQ3ZCQ2 193 aa12.21□□□□□ -0.45
SHROOM4-201ENST00000289292 RNASE13Q5GAN3 156 aaKnown RBP12.21□□□□□ -0.45
SHROOM4-201ENST00000289292 C8orf86Q6ZUL3 223 aa12.21□□□□□ -0.45
SHROOM4-201ENST00000289292 RPL36ALQ969Q0 106 aaKnown RBP12.21□□□□□ -0.45
SHROOM4-201ENST00000289292 HLA-DRB4X5D2U9 266 aa12.21□□□□□ -0.45
SHROOM4-201ENST00000289292 PRADC1Q9BSG0 188 aa12.21□□□□□ -0.46
SHROOM4-201ENST00000289292 JPT2Q9H910 190 aa12.2□□□□□ -0.46
SHROOM4-201ENST00000289292 FAM120AOSQ5T036 256 aa12.2□□□□□ -0.46
SHROOM4-201ENST00000289292 PCP2Q8IVA1 136 aa12.2□□□□□ -0.46
SHROOM4-201ENST00000289292 C11orf52Q96A22 123 aa12.2□□□□□ -0.46
SHROOM4-201ENST00000289292 LTAP01374 205 aa12.2□□□□□ -0.46
SHROOM4-201ENST00000289292 LY6G5BQ8NDX9 201 aa12.2□□□□□ -0.46
SHROOM4-201ENST00000289292 GNLYP22749 145 aa12.19□□□□□ -0.46
SHROOM4-201ENST00000289292 TRPT1Q86TN4 253 aaKnown RBP12.19□□□□□ -0.46
SHROOM4-201ENST00000289292 NCOR1P1Q9H4R4 102 aa12.19□□□□□ -0.46
SHROOM4-201ENST00000289292 OOSP1A8MZH6 123 aa12.19□□□□□ -0.46
SHROOM4-201ENST00000289292 LOXP28300 417 aaPredicted RBP12.19□□□□□ -0.46
SHROOM4-201ENST00000289292 ZNF318Q5VUA4 2279 aa12.19□□□□□ -0.46
SHROOM4-201ENST00000289292 PRR20EP86478 221 aa12.19□□□□□ -0.46
SHROOM4-201ENST00000289292 PRR20CP86479 221 aa12.19□□□□□ -0.46
SHROOM4-201ENST00000289292 PRR20DP86480 221 aa12.19□□□□□ -0.46
SHROOM4-201ENST00000289292 PRR20BP86481 221 aa12.19□□□□□ -0.46
SHROOM4-201ENST00000289292 PRR20AP86496 221 aa12.19□□□□□ -0.46
SHROOM4-201ENST00000289292 TMEM190Q8WZ59 177 aa12.19□□□□□ -0.46
SHROOM4-201ENST00000289292 PMVKQ15126 192 aa12.19□□□□□ -0.46
SHROOM4-201ENST00000289292 DEFB131AP59861 70 aa12.18□□□□□ -0.46
SHROOM4-201ENST00000289292 C12orf74Q32Q52 190 aa12.18□□□□□ -0.46
SHROOM4-201ENST00000289292 SH2D6Q7Z4S9 175 aa12.18□□□□□ -0.46
SHROOM4-201ENST00000289292 C6orf226Q5I0X4 101 aa12.18□□□□□ -0.46
SHROOM4-201ENST00000289292 DAZ1Q9NQZ3 744 aaKnown RBP12.18□□□□□ -0.46
SHROOM4-201ENST00000289292 TRBV20-1A0A075B6N2 111 aa12.18□□□□□ -0.46
SHROOM4-201ENST00000289292 MAPK1IP1LQ8NDC0 245 aa12.18□□□□□ -0.46
SHROOM4-201ENST00000289292 RS1O15537 224 aa12.18□□□□□ -0.46
SHROOM4-201ENST00000289292 GATA1P15976 413 aaPredicted RBP12.18□□□□□ -0.46
SHROOM4-201ENST00000289292 KLHL30-AS1Q8NEE0 82 aa12.18□□□□□ -0.46
SHROOM4-201ENST00000289292 C1QTNF4Q9BXJ3 329 aa12.18□□□□□ -0.46
SHROOM4-201ENST00000289292 THAP8Q8NA92 274 aa12.17□□□□□ -0.46
SHROOM4-201ENST00000289292 FAM110DQ8TAY7 271 aaPredicted RBP12.17□□□□□ -0.46
SHROOM4-201ENST00000289292 USMG5Q96IX5 58 aa12.17□□□□□ -0.46
SHROOM4-201ENST00000289292 B5MCH6 92 aa12.17□□□□□ -0.46
SHROOM4-201ENST00000289292 VWC2LB2RUY7 222 aa12.16□□□□□ -0.46
SHROOM4-201ENST00000289292 Q8TCH9 128 aa12.16□□□□□ -0.46
SHROOM4-201ENST00000289292 DOCK8Q8NF50 2099 aa12.16□□□□□ -0.46
SHROOM4-201ENST00000289292 TMEM14CQ9P0S9 112 aa12.16□□□□□ -0.46
SHROOM4-201ENST00000289292 OR11H6Q8NGC7 330 aa12.16□□□□□ -0.46
SHROOM4-201ENST00000289292 INSP01308 110 aa12.16□□□□□ -0.46
SHROOM4-201ENST00000289292 IGHV2-70DA0A0C4DH43 119 aa12.16□□□□□ -0.46
SHROOM4-201ENST00000289292 CFHR4Q92496 578 aa12.16□□□□□ -0.46
SHROOM4-201ENST00000289292 GAGE12JA6NER3 117 aa12.15□□□□□ -0.46
SHROOM4-201ENST00000289292 SDHAF1A6NFY7 115 aa12.15□□□□□ -0.46
SHROOM4-201ENST00000289292 IGLC1P0CG04 106 aa12.15□□□□□ -0.46
SHROOM4-201ENST00000289292 GAGE4Q13068 117 aa12.15□□□□□ -0.46
SHROOM4-201ENST00000289292 GAGE5Q13069 117 aa12.15□□□□□ -0.46
SHROOM4-201ENST00000289292 CACNA1EQ15878 2313 aa12.15□□□□□ -0.46
SHROOM4-201ENST00000289292 FRMD6-AS1P0C7T7 363 aa12.15□□□□□ -0.46
SHROOM4-201ENST00000289292 TMEM141Q96I45 108 aa12.15□□□□□ -0.46
SHROOM4-201ENST00000289292 KLF5Q13887 457 aaPredicted RBP12.15□□□□□ -0.46
SHROOM4-201ENST00000289292 Q6ZS92 163 aa12.15□□□□□ -0.46
SHROOM4-201ENST00000289292 DEFB125Q8N687 156 aa12.15□□□□□ -0.46
SHROOM4-201ENST00000289292 RITA1Q96K30 269 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms