RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 MPDU1O75352 247 aa3.55□□□□□ -1.84
CDKL5-204ENST00000623364 EIF3GO75821 320 aaKnown RBP eCLIP3.55□□□□□ -1.84
CDKL5-204ENST00000623364 SLC25A5P05141 298 aaKnown RBP3.55□□□□□ -1.84
CDKL5-204ENST00000623364 RNASE2P10153 161 aaKnown RBP3.55□□□□□ -1.84
CDKL5-204ENST00000623364 HSPE1P61604 102 aaKnown RBP3.55□□□□□ -1.84
CDKL5-204ENST00000623364 LYZP61626 148 aa3.55□□□□□ -1.84
CDKL5-204ENST00000623364 QRFPP83859 136 aa3.55□□□□□ -1.84
CDKL5-204ENST00000623364 MSMO1Q15800 293 aa3.55□□□□□ -1.84
CDKL5-204ENST00000623364 SP6Q3SY56 376 aa3.55□□□□□ -1.84
CDKL5-204ENST00000623364 ZNF876PQ49A33 203 aa3.55□□□□□ -1.84
CDKL5-204ENST00000623364 AADACL3Q5VUY0 350 aa3.55□□□□□ -1.84
CDKL5-204ENST00000623364 FAM89BQ8N5H3 189 aa3.55□□□□□ -1.84
CDKL5-204ENST00000623364 CYB561D1Q8N8Q1 229 aa3.55□□□□□ -1.84
CDKL5-204ENST00000623364 OR4D10Q8NGI6 311 aa3.55□□□□□ -1.84
CDKL5-204ENST00000623364 TSKUQ8WUA8 353 aa3.55□□□□□ -1.84
CDKL5-204ENST00000623364 TRUB1Q8WWH5 349 aaKnown RBP3.55□□□□□ -1.84
CDKL5-204ENST00000623364 GPR82Q96P67 336 aa3.55□□□□□ -1.84
CDKL5-204ENST00000623364 SLC50A1Q9BRV3 221 aa3.55□□□□□ -1.84
CDKL5-204ENST00000623364 LPAR5Q9H1C0 372 aa3.55□□□□□ -1.84
CDKL5-204ENST00000623364 TP53TG3Q9ULZ0 132 aa3.55□□□□□ -1.84
CDKL5-204ENST00000623364 TRBV6-4A0A1B0GX49 114 aa3.54□□□□□ -1.84
CDKL5-204ENST00000623364 ERICH4A6NGS2 130 aa3.54□□□□□ -1.84
CDKL5-204ENST00000623364 CXCL3P19876 107 aa3.54□□□□□ -1.84
CDKL5-204ENST00000623364 TMEM50BP56557 158 aa3.54□□□□□ -1.84
CDKL5-204ENST00000623364 ZNF90Q03938 601 aa3.54□□□□□ -1.84
CDKL5-204ENST00000623364 HACD4Q5VWC8 232 aa3.54□□□□□ -1.84
CDKL5-204ENST00000623364 C15orf54Q8N8G6 183 aa3.54□□□□□ -1.84
CDKL5-204ENST00000623364 OR4D5Q8NGN0 318 aa3.54□□□□□ -1.84
CDKL5-204ENST00000623364 LRRC20Q8TCA0 184 aa3.54□□□□□ -1.84
CDKL5-204ENST00000623364 SECTM1Q8WVN6 248 aa3.54□□□□□ -1.84
CDKL5-204ENST00000623364 NPIPB3Q92617 1050 aa3.54□□□□□ -1.84
CDKL5-204ENST00000623364 SLC29A1Q99808 456 aa3.54□□□□□ -1.84
CDKL5-204ENST00000623364 GFRA4Q9GZZ7 299 aa3.54□□□□□ -1.84
CDKL5-204ENST00000623364 KCNK15Q9H427 330 aa3.54□□□□□ -1.84
CDKL5-204ENST00000623364 FGFR1OP2Q9NVK5 253 aa3.54□□□□□ -1.84
CDKL5-204ENST00000623364 A0A087X002 238 aa3.53□□□□□ -1.84
CDKL5-204ENST00000623364 A0A0G2JND7 137 aa3.53□□□□□ -1.84
CDKL5-204ENST00000623364 MEIS3P1A6NDR6 274 aa3.53□□□□□ -1.84
CDKL5-204ENST00000623364 FBLL1A6NHQ2 334 aaKnown RBP3.53□□□□□ -1.84
CDKL5-204ENST00000623364 INS-IGF2F8WCM5 200 aa3.53□□□□□ -1.84
CDKL5-204ENST00000623364 J3QRE1 110 aa3.53□□□□□ -1.84
CDKL5-204ENST00000623364 MT2AP02795 61 aa3.53□□□□□ -1.84
CDKL5-204ENST00000623364 HOXB5P09067 269 aa3.53□□□□□ -1.84
CDKL5-204ENST00000623364 GABRB1P18505 474 aa3.53□□□□□ -1.84
CDKL5-204ENST00000623364 CALB2P22676 271 aa3.53□□□□□ -1.84
CDKL5-204ENST00000623364 PRDX6P30041 224 aa3.53□□□□□ -1.84
CDKL5-204ENST00000623364 TALDO1P37837 337 aa3.53□□□□□ -1.84
CDKL5-204ENST00000623364 AMTP48728 403 aa3.53□□□□□ -1.84
CDKL5-204ENST00000623364 GTF2A1P52655 376 aaPredicted RBP3.53□□□□□ -1.84
CDKL5-204ENST00000623364 PLAC9Q5JTB6 97 aa3.53□□□□□ -1.84
CDKL5-204ENST00000623364 Q6ZS49 121 aa3.53□□□□□ -1.84
CDKL5-204ENST00000623364 ACY3Q96HD9 319 aa3.53□□□□□ -1.84
CDKL5-204ENST00000623364 ODF3Q96PU9 254 aa3.53□□□□□ -1.84
CDKL5-204ENST00000623364 C20orf85Q9H1P6 137 aa3.53□□□□□ -1.84
CDKL5-204ENST00000623364 SSR3Q9UNL2 185 aa3.53□□□□□ -1.84
CDKL5-204ENST00000623364 IGKV1D-8A0A087WSZ0 117 aa3.52□□□□□ -1.85
CDKL5-204ENST00000623364 A0A087WZ39 114 aa3.52□□□□□ -1.85
CDKL5-204ENST00000623364 SNRPGP15A8MWD9 76 aa3.52□□□□□ -1.85
CDKL5-204ENST00000623364 TNFRSF6BO95407 300 aa3.52□□□□□ -1.85
CDKL5-204ENST00000623364 ANGP03950 147 aaKnown RBP3.52□□□□□ -1.85
CDKL5-204ENST00000623364 HOXB6P17509 224 aaKnown RBP3.52□□□□□ -1.85
CDKL5-204ENST00000623364 PRKACGP22612 351 aa3.52□□□□□ -1.85
CDKL5-204ENST00000623364 F2RP25116 425 aa3.52□□□□□ -1.85
CDKL5-204ENST00000623364 LPAR6P43657 344 aa3.52□□□□□ -1.85
CDKL5-204ENST00000623364 Q499Y3 187 aa3.52□□□□□ -1.85
CDKL5-204ENST00000623364 PCOTHQ58A44 107 aa3.52□□□□□ -1.85
CDKL5-204ENST00000623364 C12orf73Q69YU5 71 aa3.52□□□□□ -1.85
CDKL5-204ENST00000623364 ETFRF1Q6IPR1 90 aa3.52□□□□□ -1.85
CDKL5-204ENST00000623364 RPL22L1Q6P5R6 122 aaKnown RBP3.52□□□□□ -1.85
CDKL5-204ENST00000623364 ZNF546Q86UE3 836 aa3.52□□□□□ -1.85
CDKL5-204ENST00000623364 OR56B1Q8NGI3 324 aa3.52□□□□□ -1.85
CDKL5-204ENST00000623364 DNAJC9Q8WXX5 260 aa3.52□□□□□ -1.85
CDKL5-204ENST00000623364 SPXQ9BT56 116 aa3.52□□□□□ -1.85
CDKL5-204ENST00000623364 MIXL1Q9H2W2 232 aa3.52□□□□□ -1.85
CDKL5-204ENST00000623364 EFCAB1Q9HAE3 211 aa3.52□□□□□ -1.85
CDKL5-204ENST00000623364 PNMA8CA0A1B0GUJ8 204 aa3.51□□□□□ -1.85
CDKL5-204ENST00000623364 LINC00854A0A1B0GVQ3 168 aa3.51□□□□□ -1.85
CDKL5-204ENST00000623364 TMEM262E9PQX1 116 aa3.51□□□□□ -1.85
CDKL5-204ENST00000623364 GYG2O15488 501 aa3.51□□□□□ -1.85
CDKL5-204ENST00000623364 FABP1P07148 127 aa3.51□□□□□ -1.85
CDKL5-204ENST00000623364 RNASE4P34096 147 aaKnown RBP3.51□□□□□ -1.85
CDKL5-204ENST00000623364 HTR2BP41595 481 aa3.51□□□□□ -1.85
CDKL5-204ENST00000623364 KRTAP10-10P60014 251 aa3.51□□□□□ -1.85
CDKL5-204ENST00000623364 MS4A2Q01362 244 aa3.51□□□□□ -1.85
CDKL5-204ENST00000623364 P2RY14Q15391 338 aa3.51□□□□□ -1.85
CDKL5-204ENST00000623364 ZNF674Q2M3X9 581 aa3.51□□□□□ -1.85
CDKL5-204ENST00000623364 DNAL1Q4LDG9 190 aa3.51□□□□□ -1.85
CDKL5-204ENST00000623364 CCDC58Q4VC31 144 aa3.51□□□□□ -1.85
CDKL5-204ENST00000623364 HSD17B12Q53GQ0 312 aa3.51□□□□□ -1.85
CDKL5-204ENST00000623364 KRTAP26-1Q6PEX3 210 aa3.51□□□□□ -1.85
CDKL5-204ENST00000623364 DHRS11Q6UWP2 260 aa3.51□□□□□ -1.85
CDKL5-204ENST00000623364 ARRDC1Q8N5I2 433 aa3.51□□□□□ -1.85
CDKL5-204ENST00000623364 FCAMRQ8WWV6 532 aa3.51□□□□□ -1.85
CDKL5-204ENST00000623364 LINC00477Q96M19 166 aa3.51□□□□□ -1.85
CDKL5-204ENST00000623364 MAGIXQ9H6Y5 334 aa3.51□□□□□ -1.85
CDKL5-204ENST00000623364 ENY2Q9NPA8 101 aa3.51□□□□□ -1.85
CDKL5-204ENST00000623364 GNGT2O14610 69 aa3.5□□□□□ -1.85
CDKL5-204ENST00000623364 TNFAIP8O95379 198 aa3.5□□□□□ -1.85
CDKL5-204ENST00000623364 SPRR2EP22531 72 aa3.5□□□□□ -1.85
CDKL5-204ENST00000623364 S100A7P31151 101 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms