RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 H3BTX0 84 aa10.32□□□□□ -0.76
HDDC2-209ENST00000609477 OR7C2O60412 319 aa10.32□□□□□ -0.76
HDDC2-209ENST00000609477 JTBO76095 146 aa10.32□□□□□ -0.76
HDDC2-209ENST00000609477 INSP01308 110 aa10.32□□□□□ -0.76
HDDC2-209ENST00000609477 RBMY1A1P0DJD3 496 aaKnown RBP10.32□□□□□ -0.76
HDDC2-209ENST00000609477 RBMY1CP0DJD4 496 aa10.32□□□□□ -0.76
HDDC2-209ENST00000609477 TSPOP30536 169 aa10.32□□□□□ -0.76
HDDC2-209ENST00000609477 CDKN1BP46527 198 aa10.32□□□□□ -0.76
HDDC2-209ENST00000609477 FXYD7P58549 80 aa10.32□□□□□ -0.76
HDDC2-209ENST00000609477 RBMY1FQ15415 496 aaKnown RBP10.32□□□□□ -0.76
HDDC2-209ENST00000609477 PQLC2Q6ZP29 291 aa10.32□□□□□ -0.76
HDDC2-209ENST00000609477 TMEM256Q8N2U0 113 aa10.32□□□□□ -0.76
HDDC2-209ENST00000609477 FXYD5Q96DB9 178 aa10.32□□□□□ -0.76
HDDC2-209ENST00000609477 C20orf144Q9BQM9 153 aa10.32□□□□□ -0.76
HDDC2-209ENST00000609477 CXorf65A6NEN9 183 aa10.31□□□□□ -0.76
HDDC2-209ENST00000609477 CRXO43186 299 aaPredicted RBP10.31□□□□□ -0.76
HDDC2-209ENST00000609477 ATP6V0CP27449 155 aa10.31□□□□□ -0.76
HDDC2-209ENST00000609477 SPINK13Q1W4C9 94 aa10.31□□□□□ -0.76
HDDC2-209ENST00000609477 HSD17B11Q8NBQ5 300 aa10.31□□□□□ -0.76
HDDC2-209ENST00000609477 OR10G4Q8NGN3 311 aa10.31□□□□□ -0.76
HDDC2-209ENST00000609477 OR10G9Q8NGN4 311 aa10.31□□□□□ -0.76
HDDC2-209ENST00000609477 OR10G7Q8NGN6 311 aa10.31□□□□□ -0.76
HDDC2-209ENST00000609477 BLNKQ8WV28 456 aa10.31□□□□□ -0.76
HDDC2-209ENST00000609477 LINC00477Q96M19 166 aa10.31□□□□□ -0.76
HDDC2-209ENST00000609477 RFNGQ9Y644 331 aa10.31□□□□□ -0.76
HDDC2-209ENST00000609477 TENM2Q9NT68 2774 aa10.31□□□□□ -0.76
HDDC2-209ENST00000609477 TEX48A0A1B0GUV7 120 aa10.3□□□□□ -0.76
HDDC2-209ENST00000609477 HMSDA8MTL9 139 aa10.3□□□□□ -0.76
HDDC2-209ENST00000609477 C11orf94C9JXX5 98 aa10.3□□□□□ -0.76
HDDC2-209ENST00000609477 NPIPB6E9PJ23 425 aa10.3□□□□□ -0.76
HDDC2-209ENST00000609477 HBE1P02100 147 aa10.3□□□□□ -0.76
HDDC2-209ENST00000609477 ZNF345Q14585 488 aa10.3□□□□□ -0.76
HDDC2-209ENST00000609477 CEMP1Q6PRD7 247 aaPredicted RBP10.3□□□□□ -0.76
HDDC2-209ENST00000609477 C1orf158Q8N1D5 194 aa10.3□□□□□ -0.76
HDDC2-209ENST00000609477 ARL6IP6Q8N6S5 226 aa10.3□□□□□ -0.76
HDDC2-209ENST00000609477 TMEM208Q9BTX3 173 aa10.3□□□□□ -0.76
HDDC2-209ENST00000609477 KLK5Q9Y337 293 aaPredicted RBP10.3□□□□□ -0.76
HDDC2-209ENST00000609477 M0R2Z0 102 aa10.29□□□□□ -0.76
HDDC2-209ENST00000609477 DEFB4AO15263 64 aa10.29□□□□□ -0.76
HDDC2-209ENST00000609477 ARPC5O15511 151 aa10.29□□□□□ -0.76
HDDC2-209ENST00000609477 OR10J4P0C629 311 aa10.29□□□□□ -0.76
HDDC2-209ENST00000609477 UBE2L3P68036 154 aaKnown RBP10.29□□□□□ -0.76
HDDC2-209ENST00000609477 ICAM4Q14773 271 aa10.29□□□□□ -0.76
HDDC2-209ENST00000609477 RRN3P1Q2M238 152 aa10.29□□□□□ -0.76
HDDC2-209ENST00000609477 ZNF503Q96F45 646 aa10.29□□□□□ -0.76
HDDC2-209ENST00000609477 IGHV3OR16-12A0A075B7B8 117 aa10.28□□□□□ -0.76
HDDC2-209ENST00000609477 PRAC2D3DTV9 90 aa10.28□□□□□ -0.76
HDDC2-209ENST00000609477 M0R3E3 92 aa10.28□□□□□ -0.76
HDDC2-209ENST00000609477 NMBP08949 121 aa10.28□□□□□ -0.76
HDDC2-209ENST00000609477 LEPP41159 167 aa10.28□□□□□ -0.76
HDDC2-209ENST00000609477 CSN1S1P47710 185 aa10.28□□□□□ -0.76
HDDC2-209ENST00000609477 CDC34P49427 236 aaPredicted RBP10.28□□□□□ -0.76
HDDC2-209ENST00000609477 RAB2AP61019 212 aa10.28□□□□□ -0.76
HDDC2-209ENST00000609477 FAM74A1Q5RGS3 127 aa10.28□□□□□ -0.76
HDDC2-209ENST00000609477 RPL7L1Q6DKI1 246 aaKnown RBP10.28□□□□□ -0.76
HDDC2-209ENST00000609477 C9orf47Q6ZRZ4 202 aa10.28□□□□□ -0.76
HDDC2-209ENST00000609477 EXOC3-AS1Q8N2X6 119 aa10.28□□□□□ -0.76
HDDC2-209ENST00000609477 RPP25LQ8N5L8 163 aaKnown RBP10.28□□□□□ -0.76
HDDC2-209ENST00000609477 RXFP4Q8TDU9 374 aa10.28□□□□□ -0.76
HDDC2-209ENST00000609477 PHLDA1Q8WV24 401 aaPredicted RBP10.28□□□□□ -0.76
HDDC2-209ENST00000609477 A0A0D9SG52 128 aa10.27□□□□□ -0.77
HDDC2-209ENST00000609477 TRBV7-9A0A0J9YWB2 115 aa10.27□□□□□ -0.77
HDDC2-209ENST00000609477 RBAKDNA6NC62 111 aa10.27□□□□□ -0.77
HDDC2-209ENST00000609477 SLC25A5P05141 298 aaKnown RBP10.27□□□□□ -0.77
HDDC2-209ENST00000609477 STAG3L2P0CL84 134 aa10.27□□□□□ -0.77
HDDC2-209ENST00000609477 STAG3L3P0CL85 134 aa10.27□□□□□ -0.77
HDDC2-209ENST00000609477 SPART-AS1P0CW21 52 aa10.27□□□□□ -0.77
HDDC2-209ENST00000609477 TCTAP57738 103 aa10.27□□□□□ -0.77
HDDC2-209ENST00000609477 NANOS2P60321 138 aaKnown RBP10.27□□□□□ -0.77
HDDC2-209ENST00000609477 RANP62826 216 aaKnown RBP10.27□□□□□ -0.77
HDDC2-209ENST00000609477 PMS2P11Q13670 270 aa10.27□□□□□ -0.77
HDDC2-209ENST00000609477 FAM122CQ6P4D5 195 aa10.27□□□□□ -0.77
HDDC2-209ENST00000609477 PHYHIPLQ96FC7 376 aa10.27□□□□□ -0.77
HDDC2-209ENST00000609477 ACTR3CQ9C0K3 210 aaPredicted RBP10.27□□□□□ -0.77
HDDC2-209ENST00000609477 H7BYZ3 331 aa10.26□□□□□ -0.77
HDDC2-209ENST00000609477 CT45A10P0DMU9 189 aa10.26□□□□□ -0.77
HDDC2-209ENST00000609477 TAS2R60P59551 318 aa10.26□□□□□ -0.77
HDDC2-209ENST00000609477 TMEM78Q5T7P6 136 aa10.26□□□□□ -0.77
HDDC2-209ENST00000609477 BAP18Q8IXM2 172 aa10.26□□□□□ -0.77
HDDC2-209ENST00000609477 KCNRGQ8N5I3 272 aa10.26□□□□□ -0.77
HDDC2-209ENST00000609477 RAB24Q969Q5 203 aa10.26□□□□□ -0.77
HDDC2-209ENST00000609477 ARPC5LQ9BPX5 153 aa10.26□□□□□ -0.77
HDDC2-209ENST00000609477 Q9H3A6 140 aa10.26□□□□□ -0.77
HDDC2-209ENST00000609477 TRAV12-2A0A075B6T6 113 aa10.25□□□□□ -0.77
HDDC2-209ENST00000609477 LOC102723971A0A1B0GUV8 181 aa10.25□□□□□ -0.77
HDDC2-209ENST00000609477 CXorf1O96002 111 aa10.25□□□□□ -0.77
HDDC2-209ENST00000609477 Q6ZNX1 250 aa10.25□□□□□ -0.77
HDDC2-209ENST00000609477 ZNF493Q6ZR52 646 aa10.25□□□□□ -0.77
HDDC2-209ENST00000609477 SUN5Q8TC36 379 aa10.25□□□□□ -0.77
HDDC2-209ENST00000609477 FAM19A4Q96LR4 140 aa10.25□□□□□ -0.77
HDDC2-209ENST00000609477 LINC01587Q99440 93 aa10.25□□□□□ -0.77
HDDC2-209ENST00000609477 AGPAT4-IT1Q9H0P7 198 aa10.25□□□□□ -0.77
HDDC2-209ENST00000609477 SH3BGRL3Q9H299 93 aa10.25□□□□□ -0.77
HDDC2-209ENST00000609477 OTORQ9NRC9 128 aa10.25□□□□□ -0.77
HDDC2-209ENST00000609477 STARD9Q9P2P6 4700 aa10.25□□□□□ -0.77
HDDC2-209ENST00000609477 TRAV10A0A0B4J240 114 aa10.24□□□□□ -0.77
HDDC2-209ENST00000609477 LCE6AA0A183 80 aa10.24□□□□□ -0.77
HDDC2-209ENST00000609477 ARL14EPLP0DKL9 152 aa10.24□□□□□ -0.77
HDDC2-209ENST00000609477 CRISP2P16562 243 aa10.24□□□□□ -0.77
HDDC2-209ENST00000609477 C2CD4CQ8TF44 421 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms