RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 WDR73Q6P4I2 378 aa13.35□□□□□ -0.27
PPFIA3-207ENST00000602716 OR5AU1Q8NGC0 362 aa13.35□□□□□ -0.27
PPFIA3-207ENST00000602716 OR4X2Q8NGF9 303 aa13.35□□□□□ -0.27
PPFIA3-207ENST00000602716 LINC01006Q8NI28 216 aa13.35□□□□□ -0.27
PPFIA3-207ENST00000602716 USMG5Q96IX5 58 aa13.35□□□□□ -0.27
PPFIA3-207ENST00000602716 TRAV30A0A087WSZ9 112 aa13.34□□□□□ -0.27
PPFIA3-207ENST00000602716 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.34□□□□□ -0.27
PPFIA3-207ENST00000602716 F2Z2F3 143 aa13.34□□□□□ -0.27
PPFIA3-207ENST00000602716 PLP1P60201 277 aa13.34□□□□□ -0.27
PPFIA3-207ENST00000602716 RPL19P84098 196 aaKnown RBP13.34□□□□□ -0.27
PPFIA3-207ENST00000602716 C10orf113Q5VZT2 155 aa13.34□□□□□ -0.27
PPFIA3-207ENST00000602716 WIPF2Q8TF74 440 aaPredicted RBP13.34□□□□□ -0.27
PPFIA3-207ENST00000602716 RNF125Q96EQ8 232 aa13.34□□□□□ -0.27
PPFIA3-207ENST00000602716 WI2-2373I1.2A0A1W2PRP0 233 aa13.34□□□□□ -0.27
PPFIA3-207ENST00000602716 SMIM27A0A1W2PRY6 76 aa13.34□□□□□ -0.27
PPFIA3-207ENST00000602716 TCF21O43680 179 aa13.34□□□□□ -0.27
PPFIA3-207ENST00000602716 COX19Q49B96 90 aa13.34□□□□□ -0.27
PPFIA3-207ENST00000602716 IBA57Q5T440 356 aaKnown RBP13.34□□□□□ -0.27
PPFIA3-207ENST00000602716 TMEM136Q6ZRR5 245 aa13.34□□□□□ -0.27
PPFIA3-207ENST00000602716 BAGE3Q86Y29 109 aa13.34□□□□□ -0.27
PPFIA3-207ENST00000602716 BAGE2Q86Y30 109 aa13.34□□□□□ -0.27
PPFIA3-207ENST00000602716 ZFAND3Q9H8U3 227 aa13.34□□□□□ -0.27
PPFIA3-207ENST00000602716 PPP1R14DQ9NXH3 145 aa13.34□□□□□ -0.27
PPFIA3-207ENST00000602716 BMPR1BO00238 502 aa13.33□□□□□ -0.28
PPFIA3-207ENST00000602716 ELANEP08246 267 aa13.33□□□□□ -0.28
PPFIA3-207ENST00000602716 MGST1P10620 155 aaKnown RBP13.33□□□□□ -0.28
PPFIA3-207ENST00000602716 ARL3P36405 182 aa13.33□□□□□ -0.28
PPFIA3-207ENST00000602716 LINC00305Q7Z4B0 112 aa13.33□□□□□ -0.28
PPFIA3-207ENST00000602716 RNF152Q8N8N0 203 aa13.33□□□□□ -0.28
PPFIA3-207ENST00000602716 OR1L4Q8NGR5 311 aa13.33□□□□□ -0.28
PPFIA3-207ENST00000602716 NAT8BQ9UHF3 227 aa13.33□□□□□ -0.28
PPFIA3-207ENST00000602716 TMEM89A2RUT3 159 aa13.32□□□□□ -0.28
PPFIA3-207ENST00000602716 HYPMO75409 117 aa13.32□□□□□ -0.28
PPFIA3-207ENST00000602716 TCL1AP56279 114 aa13.32□□□□□ -0.28
PPFIA3-207ENST00000602716 TOMM20LQ6UXN7 152 aa13.32□□□□□ -0.28
PPFIA3-207ENST00000602716 C11orf44Q8N8P7 122 aa13.32□□□□□ -0.28
PPFIA3-207ENST00000602716 JMJD8Q96S16 334 aa13.32□□□□□ -0.28
PPFIA3-207ENST00000602716 PAXXQ9BUH6 204 aa13.32□□□□□ -0.28
PPFIA3-207ENST00000602716 ZNF705FA8MVS1 300 aaPredicted RBP13.32□□□□□ -0.28
PPFIA3-207ENST00000602716 SPINK4O60575 86 aa13.32□□□□□ -0.28
PPFIA3-207ENST00000602716 ZNF705DP0CH99 300 aaPredicted RBP13.32□□□□□ -0.28
PPFIA3-207ENST00000602716 ZNF705BP0CI00 300 aaPredicted RBP13.32□□□□□ -0.28
PPFIA3-207ENST00000602716 PYYP10082 97 aa13.32□□□□□ -0.28
PPFIA3-207ENST00000602716 CD33P20138 364 aa13.32□□□□□ -0.28
PPFIA3-207ENST00000602716 C16orf95Q9H693 158 aa13.32□□□□□ -0.28
PPFIA3-207ENST00000602716 MRPL27Q9P0M9 148 aaKnown RBP13.32□□□□□ -0.28
PPFIA3-207ENST00000602716 HIGD1AQ9Y241 93 aa13.32□□□□□ -0.28
PPFIA3-207ENST00000602716 A0A0G2JLM5 398 aa13.31□□□□□ -0.28
PPFIA3-207ENST00000602716 EREGO14944 169 aa13.31□□□□□ -0.28
PPFIA3-207ENST00000602716 TEX43Q6ZNM6 134 aa13.31□□□□□ -0.28
PPFIA3-207ENST00000602716 TEP1Q99973 2627 aaKnown RBP13.31□□□□□ -0.28
PPFIA3-207ENST00000602716 ZNF207O43670 478 aaKnown RBP13.3□□□□□ -0.28
PPFIA3-207ENST00000602716 UNQ9165/PRO28630Q6UXU0 137 aa13.3□□□□□ -0.28
PPFIA3-207ENST00000602716 FXYD5Q96DB9 178 aa13.3□□□□□ -0.28
PPFIA3-207ENST00000602716 LINC00479Q96M42 142 aa13.3□□□□□ -0.28
PPFIA3-207ENST00000602716 CLPSL1A2RUU4 121 aa13.3□□□□□ -0.28
PPFIA3-207ENST00000602716 OR10J3Q5JRS4 329 aa13.3□□□□□ -0.28
PPFIA3-207ENST00000602716 NHLRC2Q8NBF2 726 aa13.3□□□□□ -0.28
PPFIA3-207ENST00000602716 SLC25A39Q9BZJ4 359 aaPredicted RBP13.3□□□□□ -0.28
PPFIA3-207ENST00000602716 MAST4O15021 2626 aa13.29□□□□□ -0.28
PPFIA3-207ENST00000602716 IZUMO1RA6ND01 250 aa13.29□□□□□ -0.28
PPFIA3-207ENST00000602716 PEX7O00628 323 aa13.29□□□□□ -0.28
PPFIA3-207ENST00000602716 DEFB136Q30KP8 78 aa13.29□□□□□ -0.28
PPFIA3-207ENST00000602716 FAM231DQ6ZW35 169 aa13.29□□□□□ -0.28
PPFIA3-207ENST00000602716 SAMD10Q9BYL1 202 aa13.29□□□□□ -0.28
PPFIA3-207ENST00000602716 H3BRN7 92 aa13.29□□□□□ -0.28
PPFIA3-207ENST00000602716 NDUFA7O95182 113 aa13.29□□□□□ -0.28
PPFIA3-207ENST00000602716 HLA-DQA1P01909 254 aa13.29□□□□□ -0.28
PPFIA3-207ENST00000602716 CD28P10747 220 aa13.29□□□□□ -0.28
PPFIA3-207ENST00000602716 RELQ04864 619 aaPredicted RBP13.29□□□□□ -0.28
PPFIA3-207ENST00000602716 KHDC1LQ5JSQ8 128 aa13.29□□□□□ -0.28
PPFIA3-207ENST00000602716 MRPL54Q6P161 138 aaKnown RBP13.29□□□□□ -0.28
PPFIA3-207ENST00000602716 ATP6V0BQ99437 205 aa13.29□□□□□ -0.28
PPFIA3-207ENST00000602716 SNHG12Q9BXW3 62 aa13.29□□□□□ -0.28
PPFIA3-207ENST00000602716 HAX1O00165 279 aa13.28□□□□□ -0.28
PPFIA3-207ENST00000602716 SCGB2A1O75556 95 aa13.28□□□□□ -0.28
PPFIA3-207ENST00000602716 CA1P00915 261 aaPredicted RBP13.28□□□□□ -0.28
PPFIA3-207ENST00000602716 GPX1P07203 203 aa13.28□□□□□ -0.28
PPFIA3-207ENST00000602716 LGALS1P09382 135 aaKnown RBP13.28□□□□□ -0.28
PPFIA3-207ENST00000602716 MYCNOSP40205 109 aa13.28□□□□□ -0.28
PPFIA3-207ENST00000602716 KIAA1644Q3SXP7 199 aa13.28□□□□□ -0.28
PPFIA3-207ENST00000602716 SHANK2-AS3Q9BTD1 123 aa13.28□□□□□ -0.28
PPFIA3-207ENST00000602716 PEF1Q9UBV8 284 aaKnown RBP13.28□□□□□ -0.28
PPFIA3-207ENST00000602716 IGHV4OR15-8A0A075B7B6 117 aa13.27□□□□□ -0.28
PPFIA3-207ENST00000602716 IGHV3OR16-13A0A075B7E8 117 aa13.27□□□□□ -0.28
PPFIA3-207ENST00000602716 A0A087WW49 117 aa13.27□□□□□ -0.28
PPFIA3-207ENST00000602716 IGHV3-49A0A0A0MS15 119 aa13.27□□□□□ -0.28
PPFIA3-207ENST00000602716 IGHV3-74A0A0B4J1X5 117 aa13.27□□□□□ -0.28
PPFIA3-207ENST00000602716 EDN2P20800 178 aa13.27□□□□□ -0.28
PPFIA3-207ENST00000602716 UBE2E2Q96LR5 201 aa13.27□□□□□ -0.28
PPFIA3-207ENST00000602716 C20orf144Q9BQM9 153 aa13.27□□□□□ -0.28
PPFIA3-207ENST00000602716 C2CD3Q4AC94 2353 aa13.27□□□□□ -0.29
PPFIA3-207ENST00000602716 APOHP02749 345 aaPredicted RBP13.27□□□□□ -0.29
PPFIA3-207ENST00000602716 GP9P14770 177 aa13.27□□□□□ -0.29
PPFIA3-207ENST00000602716 TDRG1Q3Y452 100 aa13.27□□□□□ -0.29
PPFIA3-207ENST00000602716 KCNS1Q96KK3 526 aa13.27□□□□□ -0.29
PPFIA3-207ENST00000602716 DUX3Q96PT4 197 aa13.27□□□□□ -0.29
PPFIA3-207ENST00000602716 SETD2Q9BYW2 2564 aaPredicted RBP13.27□□□□□ -0.29
PPFIA3-207ENST00000602716 TRAV34A0A0B4J273 112 aa13.26□□□□□ -0.29
PPFIA3-207ENST00000602716 IGHV3-66A0A0C4DH42 116 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms