RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 MED28Q9H204 178 aa12.5□□□□□ -0.41
IRF3-230ENST00000601809 OXA1LQ15070 435 aa12.49□□□□□ -0.41
IRF3-230ENST00000601809 MRPL53Q96EL3 112 aaKnown RBP12.49□□□□□ -0.41
IRF3-230ENST00000601809 MRPL32Q9BYC8 188 aaKnown RBP12.49□□□□□ -0.41
IRF3-230ENST00000601809 KCNIP2Q9NS61 270 aa12.49□□□□□ -0.41
IRF3-230ENST00000601809 DKK2Q9UBU2 259 aa12.49□□□□□ -0.41
IRF3-230ENST00000601809 TRAV12-2A0A075B6T6 113 aa12.48□□□□□ -0.41
IRF3-230ENST00000601809 PLAC8L1A1L4L8 177 aa12.48□□□□□ -0.41
IRF3-230ENST00000601809 NPIPB6E9PJ23 425 aa12.48□□□□□ -0.41
IRF3-230ENST00000601809 M0R3E3 92 aa12.48□□□□□ -0.41
IRF3-230ENST00000601809 INSP01308 110 aa12.48□□□□□ -0.41
IRF3-230ENST00000601809 PRM2P04554 102 aa12.48□□□□□ -0.41
IRF3-230ENST00000601809 KIR3DS1Q14943 382 aa12.48□□□□□ -0.41
IRF3-230ENST00000601809 ZNF767PQ75MW2 155 aa12.48□□□□□ -0.41
IRF3-230ENST00000601809 C2CD4CQ8TF44 421 aa12.48□□□□□ -0.41
IRF3-230ENST00000601809 FXYD5Q96DB9 178 aa12.48□□□□□ -0.41
IRF3-230ENST00000601809 AQP10Q96PS8 301 aa12.48□□□□□ -0.41
IRF3-230ENST00000601809 APLNQ9ULZ1 77 aa12.48□□□□□ -0.41
IRF3-230ENST00000601809 FUT9Q9Y231 359 aa12.48□□□□□ -0.41
IRF3-230ENST00000601809 DNAH10Q8IVF4 4471 aa12.47□□□□□ -0.41
IRF3-230ENST00000601809 TRAV10A0A0B4J240 114 aa12.47□□□□□ -0.41
IRF3-230ENST00000601809 LOC102723971A0A1B0GUV8 181 aa12.47□□□□□ -0.41
IRF3-230ENST00000601809 C17orf112F2Z3M2 114 aa12.47□□□□□ -0.41
IRF3-230ENST00000601809 G3V3Q6 166 aa12.47□□□□□ -0.41
IRF3-230ENST00000601809 HBE1P02100 147 aa12.47□□□□□ -0.41
IRF3-230ENST00000601809 GIPP09681 153 aaPredicted RBP12.47□□□□□ -0.41
IRF3-230ENST00000601809 TSPOP30536 169 aa12.47□□□□□ -0.41
IRF3-230ENST00000601809 CT45A10P0DMU9 189 aa12.46□□□□□ -0.41
IRF3-230ENST00000601809 CDKN1BP46527 198 aa12.46□□□□□ -0.41
IRF3-230ENST00000601809 TCTAP57738 103 aa12.46□□□□□ -0.41
IRF3-230ENST00000601809 RHOBP62745 196 aa12.46□□□□□ -0.41
IRF3-230ENST00000601809 RRN3P1Q2M238 152 aa12.46□□□□□ -0.41
IRF3-230ENST00000601809 RGS21Q2M5E4 152 aa12.46□□□□□ -0.41
IRF3-230ENST00000601809 FFAR4Q5NUL3 377 aa12.46□□□□□ -0.41
IRF3-230ENST00000601809 RPP25LQ8N5L8 163 aaKnown RBP12.46□□□□□ -0.41
IRF3-230ENST00000601809 ASB13Q8WXK3 278 aa12.46□□□□□ -0.41
IRF3-230ENST00000601809 FAM19A4Q96LR4 140 aa12.46□□□□□ -0.41
IRF3-230ENST00000601809 ODF3Q96PU9 254 aa12.46□□□□□ -0.41
IRF3-230ENST00000601809 OR51M1Q9H341 326 aa12.46□□□□□ -0.41
IRF3-230ENST00000601809 YTHDF2Q9Y5A9 579 aaKnown RBP12.46□□□□□ -0.41
IRF3-230ENST00000601809 ZNF705GA8MUZ8 300 aaPredicted RBP12.45□□□□□ -0.42
IRF3-230ENST00000601809 IFNA5P01569 189 aa12.45□□□□□ -0.42
IRF3-230ENST00000601809 NBEAP1P0C6P0 100 aa12.45□□□□□ -0.42
IRF3-230ENST00000601809 SPART-AS1P0CW21 52 aa12.45□□□□□ -0.42
IRF3-230ENST00000601809 AZU1P20160 251 aa12.45□□□□□ -0.42
IRF3-230ENST00000601809 FAM222AQ5U5X8 452 aa12.45□□□□□ -0.42
IRF3-230ENST00000601809 LGALS9CQ6DKI2 356 aa12.45□□□□□ -0.42
IRF3-230ENST00000601809 EXOC3-AS1Q8N2X6 119 aa12.45□□□□□ -0.42
IRF3-230ENST00000601809 OR10J6PQ8NGY7 276 aa12.45□□□□□ -0.42
IRF3-230ENST00000601809 PRELID1Q9Y255 219 aa12.45□□□□□ -0.42
IRF3-230ENST00000601809 EMP1P54849 157 aa12.44□□□□□ -0.42
IRF3-230ENST00000601809 TMEM256Q8N2U0 113 aa12.44□□□□□ -0.42
IRF3-230ENST00000601809 PHYHIPLQ96FC7 376 aa12.44□□□□□ -0.42
IRF3-230ENST00000601809 PAXXQ9BUH6 204 aa12.44□□□□□ -0.42
IRF3-230ENST00000601809 PLA2G2EQ9NZK7 142 aa12.44□□□□□ -0.42
IRF3-230ENST00000601809 TIMM9Q9Y5J7 89 aa12.44□□□□□ -0.42
IRF3-230ENST00000601809 FRAS1Q86XX4 4008 aa12.44□□□□□ -0.42
IRF3-230ENST00000601809 TEX48A0A1B0GUV7 120 aa12.43□□□□□ -0.42
IRF3-230ENST00000601809 RNF222A6NCQ9 220 aa12.43□□□□□ -0.42
IRF3-230ENST00000601809 LY6G6CO95867 125 aa12.43□□□□□ -0.42
IRF3-230ENST00000601809 OR10J4P0C629 311 aa12.43□□□□□ -0.42
IRF3-230ENST00000601809 GFI1BQ5VTD9 330 aa12.43□□□□□ -0.42
IRF3-230ENST00000601809 SCGB1C1Q8TD33 95 aa12.43□□□□□ -0.42
IRF3-230ENST00000601809 BLNKQ8WV28 456 aa12.43□□□□□ -0.42
IRF3-230ENST00000601809 RNF141Q8WVD5 230 aa12.43□□□□□ -0.42
IRF3-230ENST00000601809 C20orf144Q9BQM9 153 aa12.43□□□□□ -0.42
IRF3-230ENST00000601809 IGHV4-4A0A075B6R2 117 aa12.42□□□□□ -0.42
IRF3-230ENST00000601809 DEFB131BA0A096LNP1 70 aa12.42□□□□□ -0.42
IRF3-230ENST00000601809 IGLL5B9A064 214 aa12.42□□□□□ -0.42
IRF3-230ENST00000601809 TAS2R60P59551 318 aa12.42□□□□□ -0.42
IRF3-230ENST00000601809 ERCC8Q13216 396 aa12.42□□□□□ -0.42
IRF3-230ENST00000601809 NIPSNAP3BQ9BS92 247 aa12.42□□□□□ -0.42
IRF3-230ENST00000601809 TMEM208Q9BTX3 173 aa12.42□□□□□ -0.42
IRF3-230ENST00000601809 AGPAT4-IT1Q9H0P7 198 aa12.42□□□□□ -0.42
IRF3-230ENST00000601809 EIF3GO75821 320 aaKnown RBP eCLIP12.41□□□□□ -0.42
IRF3-230ENST00000601809 M6PRP20645 277 aa12.41□□□□□ -0.42
IRF3-230ENST00000601809 ICAM4Q14773 271 aa12.41□□□□□ -0.42
IRF3-230ENST00000601809 C9orf47Q6ZRZ4 202 aa12.41□□□□□ -0.42
IRF3-230ENST00000601809 OR2G3Q8NGZ4 309 aa12.41□□□□□ -0.42
IRF3-230ENST00000601809 RNASE8Q8TDE3 154 aaKnown RBP12.41□□□□□ -0.42
IRF3-230ENST00000601809 TNFSF18Q9UNG2 199 aa12.41□□□□□ -0.42
IRF3-230ENST00000601809 KLLNB2CW77 178 aa12.4□□□□□ -0.42
IRF3-230ENST00000601809 RAB2AP61019 212 aa12.4□□□□□ -0.42
IRF3-230ENST00000601809 LINC00477Q96M19 166 aa12.4□□□□□ -0.42
IRF3-230ENST00000601809 LINC01587Q99440 93 aa12.4□□□□□ -0.42
IRF3-230ENST00000601809 PPP1R14DQ9NXH3 145 aa12.4□□□□□ -0.42
IRF3-230ENST00000601809 IGKV2-40A0A087WW87 121 aaPredicted RBP12.39□□□□□ -0.43
IRF3-230ENST00000601809 LYRM9A8MSI8 78 aa12.39□□□□□ -0.43
IRF3-230ENST00000601809 H7BYZ3 331 aa12.39□□□□□ -0.43
IRF3-230ENST00000601809 OR7C2O60412 319 aa12.39□□□□□ -0.43
IRF3-230ENST00000601809 IGKV2D-40P01614 121 aaPredicted RBP12.39□□□□□ -0.43
IRF3-230ENST00000601809 CRISP2P16562 243 aa12.39□□□□□ -0.43
IRF3-230ENST00000601809 LEPP41159 167 aa12.39□□□□□ -0.43
IRF3-230ENST00000601809 ZNF266Q14584 549 aa12.39□□□□□ -0.43
IRF3-230ENST00000601809 KHDC3LQ587J8 217 aa12.39□□□□□ -0.43
IRF3-230ENST00000601809 LYPD1Q8N2G4 141 aa12.39□□□□□ -0.43
IRF3-230ENST00000601809 VGLL1Q99990 258 aa12.39□□□□□ -0.43
IRF3-230ENST00000601809 PSMG3Q9BT73 122 aaPredicted RBP12.39□□□□□ -0.43
IRF3-230ENST00000601809 AAMDCQ9H7C9 122 aa12.39□□□□□ -0.43
IRF3-230ENST00000601809 DNAH2Q9P225 4427 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms