RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 GCSAMLQ5JQS6 135 aa12.31□□□□□ -0.44
HERC3-214ENST00000601319 BAP18Q8IXM2 172 aa12.31□□□□□ -0.44
HERC3-214ENST00000601319 TMEM256Q8N2U0 113 aa12.31□□□□□ -0.44
HERC3-214ENST00000601319 TMEM208Q9BTX3 173 aa12.31□□□□□ -0.44
HERC3-214ENST00000601319 PARD6GQ9BYG4 376 aaPredicted RBP12.31□□□□□ -0.44
HERC3-214ENST00000601319 LY6G6CO95867 125 aa12.3□□□□□ -0.44
HERC3-214ENST00000601319 TSPOP30536 169 aa12.3□□□□□ -0.44
HERC3-214ENST00000601319 LGALS9CQ6DKI2 356 aa12.3□□□□□ -0.44
HERC3-214ENST00000601319 OR10J6PQ8NGY7 276 aa12.3□□□□□ -0.44
HERC3-214ENST00000601319 FAM167A-AS1Q96KT0 104 aa12.3□□□□□ -0.44
HERC3-214ENST00000601319 SLC25A2Q9BXI2 301 aa12.3□□□□□ -0.44
HERC3-214ENST00000601319 DKK2Q9UBU2 259 aa12.3□□□□□ -0.44
HERC3-214ENST00000601319 CDKN1BP46527 198 aa12.29□□□□□ -0.44
HERC3-214ENST00000601319 ASB13Q8WXK3 278 aa12.29□□□□□ -0.44
HERC3-214ENST00000601319 ODF3Q96PU9 254 aa12.29□□□□□ -0.44
HERC3-214ENST00000601319 PPP1R14DQ9NXH3 145 aa12.29□□□□□ -0.44
HERC3-214ENST00000601319 PRELID1Q9Y255 219 aa12.29□□□□□ -0.44
HERC3-214ENST00000601319 TRAV12-2A0A075B6T6 113 aa12.28□□□□□ -0.44
HERC3-214ENST00000601319 PRAC2D3DTV9 90 aa12.28□□□□□ -0.44
HERC3-214ENST00000601319 NPIPB6E9PJ23 425 aa12.28□□□□□ -0.44
HERC3-214ENST00000601319 NDUFB4O95168 129 aa12.28□□□□□ -0.44
HERC3-214ENST00000601319 IFNA5P01569 189 aa12.28□□□□□ -0.44
HERC3-214ENST00000601319 PYYP10082 97 aa12.28□□□□□ -0.44
HERC3-214ENST00000601319 EMP1P54849 157 aa12.28□□□□□ -0.44
HERC3-214ENST00000601319 OXA1LQ15070 435 aa12.28□□□□□ -0.44
HERC3-214ENST00000601319 FAM222AQ5U5X8 452 aa12.28□□□□□ -0.44
HERC3-214ENST00000601319 MIR17HGQ75NE6 70 aa12.28□□□□□ -0.44
HERC3-214ENST00000601319 C20orf144Q9BQM9 153 aa12.28□□□□□ -0.44
HERC3-214ENST00000601319 MED28Q9H204 178 aa12.28□□□□□ -0.44
HERC3-214ENST00000601319 PLA2G2EQ9NZK7 142 aa12.28□□□□□ -0.44
HERC3-214ENST00000601319 APLNQ9ULZ1 77 aa12.28□□□□□ -0.44
HERC3-214ENST00000601319 FUT9Q9Y231 359 aa12.28□□□□□ -0.44
HERC3-214ENST00000601319 YTHDF2Q9Y5A9 579 aaKnown RBP12.28□□□□□ -0.44
HERC3-214ENST00000601319 DEFB131BA0A096LNP1 70 aa12.27□□□□□ -0.45
HERC3-214ENST00000601319 IGLL5B9A064 214 aa12.27□□□□□ -0.45
HERC3-214ENST00000601319 FCN2Q15485 313 aa12.27□□□□□ -0.45
HERC3-214ENST00000601319 ZNF767PQ75MW2 155 aa12.27□□□□□ -0.45
HERC3-214ENST00000601319 RPP25LQ8N5L8 163 aaKnown RBP12.27□□□□□ -0.45
HERC3-214ENST00000601319 TIMM9Q9Y5J7 89 aa12.27□□□□□ -0.45
HERC3-214ENST00000601319 IGHV4-4A0A075B6R2 117 aa12.26□□□□□ -0.45
HERC3-214ENST00000601319 SCGB1C1Q8TD33 95 aa12.26□□□□□ -0.45
HERC3-214ENST00000601319 NIPSNAP3BQ9BS92 247 aa12.26□□□□□ -0.45
HERC3-214ENST00000601319 SMIM3Q9BZL3 60 aa12.26□□□□□ -0.45
HERC3-214ENST00000601319 M0R3E3 92 aa12.25□□□□□ -0.45
HERC3-214ENST00000601319 GIPP09681 153 aaPredicted RBP12.25□□□□□ -0.45
HERC3-214ENST00000601319 TAS2R60P59551 318 aa12.25□□□□□ -0.45
HERC3-214ENST00000601319 FFAR4Q5NUL3 377 aa12.25□□□□□ -0.45
HERC3-214ENST00000601319 FXYD5Q96DB9 178 aa12.25□□□□□ -0.45
HERC3-214ENST00000601319 OR51M1Q9H341 326 aa12.25□□□□□ -0.45
HERC3-214ENST00000601319 AAMDCQ9H7C9 122 aa12.25□□□□□ -0.45
HERC3-214ENST00000601319 PLAC8L1A1L4L8 177 aa12.24□□□□□ -0.45
HERC3-214ENST00000601319 LYRM9A8MSI8 78 aa12.24□□□□□ -0.45
HERC3-214ENST00000601319 ZNF705GA8MUZ8 300 aaPredicted RBP12.24□□□□□ -0.45
HERC3-214ENST00000601319 NBEAP1P0C6P0 100 aa12.24□□□□□ -0.45
HERC3-214ENST00000601319 PRB4P10163 310 aaPredicted RBP12.24□□□□□ -0.45
HERC3-214ENST00000601319 RGS21Q2M5E4 152 aa12.24□□□□□ -0.45
HERC3-214ENST00000601319 VPS13DQ5THJ4 4388 aa12.24□□□□□ -0.45
HERC3-214ENST00000601319 GFI1BQ5VTD9 330 aa12.24□□□□□ -0.45
HERC3-214ENST00000601319 BLNKQ8WV28 456 aa12.24□□□□□ -0.45
HERC3-214ENST00000601319 AQP10Q96PS8 301 aa12.24□□□□□ -0.45
HERC3-214ENST00000601319 PAXXQ9BUH6 204 aa12.24□□□□□ -0.45
HERC3-214ENST00000601319 WFDC1Q9HC57 220 aa12.24□□□□□ -0.45
HERC3-214ENST00000601319 H7BYZ3 331 aa12.23□□□□□ -0.45
HERC3-214ENST00000601319 CT45A10P0DMU9 189 aa12.23□□□□□ -0.45
HERC3-214ENST00000601319 LEPP41159 167 aa12.23□□□□□ -0.45
HERC3-214ENST00000601319 KHDC3LQ587J8 217 aa12.23□□□□□ -0.45
HERC3-214ENST00000601319 C16orf74Q96GX8 76 aa12.23□□□□□ -0.45
HERC3-214ENST00000601319 FAM210BQ96KR6 192 aa12.23□□□□□ -0.45
HERC3-214ENST00000601319 LINC01587Q99440 93 aa12.23□□□□□ -0.45
HERC3-214ENST00000601319 OR7C2O60412 319 aa12.22□□□□□ -0.45
HERC3-214ENST00000601319 OR10J4P0C629 311 aa12.22□□□□□ -0.45
HERC3-214ENST00000601319 TAS2R45P59539 299 aa12.22□□□□□ -0.45
HERC3-214ENST00000601319 ZNF266Q14584 549 aa12.22□□□□□ -0.45
HERC3-214ENST00000601319 ICAM4Q14773 271 aa12.22□□□□□ -0.45
HERC3-214ENST00000601319 ZNF493Q6ZR52 646 aa12.22□□□□□ -0.45
HERC3-214ENST00000601319 EXOC3-AS1Q8N2X6 119 aa12.22□□□□□ -0.45
HERC3-214ENST00000601319 RNF141Q8WVD5 230 aa12.22□□□□□ -0.45
HERC3-214ENST00000601319 ZNF503Q96F45 646 aa12.22□□□□□ -0.45
HERC3-214ENST00000601319 FAM19A4Q96LR4 140 aa12.22□□□□□ -0.45
HERC3-214ENST00000601319 LINC00477Q96M19 166 aa12.22□□□□□ -0.45
HERC3-214ENST00000601319 AZU1P20160 251 aa12.21□□□□□ -0.45
HERC3-214ENST00000601319 DAD1P61803 113 aa12.21□□□□□ -0.45
HERC3-214ENST00000601319 UBE2L3P68036 154 aaKnown RBP12.21□□□□□ -0.45
HERC3-214ENST00000601319 KIR3DS1Q14943 382 aa12.21□□□□□ -0.45
HERC3-214ENST00000601319 C9orf47Q6ZRZ4 202 aa12.21□□□□□ -0.45
HERC3-214ENST00000601319 LYPD1Q8N2G4 141 aa12.21□□□□□ -0.45
HERC3-214ENST00000601319 RNASE8Q8TDE3 154 aaKnown RBP12.21□□□□□ -0.45
HERC3-214ENST00000601319 TMEM263Q8WUH6 116 aaKnown RBP12.21□□□□□ -0.45
HERC3-214ENST00000601319 PHYHIPLQ96FC7 376 aa12.21□□□□□ -0.45
HERC3-214ENST00000601319 NDUFAF3Q9BU61 184 aa12.21□□□□□ -0.45
HERC3-214ENST00000601319 KMT2AQ03164 3969 aa12.21□□□□□ -0.46
HERC3-214ENST00000601319 PRM2P04554 102 aa12.2□□□□□ -0.46
HERC3-214ENST00000601319 M6PRP20645 277 aa12.2□□□□□ -0.46
HERC3-214ENST00000601319 ACOT6Q3I5F7 207 aaPredicted RBP12.2□□□□□ -0.46
HERC3-214ENST00000601319 KLLNB2CW77 178 aa12.19□□□□□ -0.46
HERC3-214ENST00000601319 SLC25A5P05141 298 aaKnown RBP12.19□□□□□ -0.46
HERC3-214ENST00000601319 NMBP08949 121 aa12.19□□□□□ -0.46
HERC3-214ENST00000601319 CRISP2P16562 243 aa12.19□□□□□ -0.46
HERC3-214ENST00000601319 OR2G3Q8NGZ4 309 aa12.19□□□□□ -0.46
HERC3-214ENST00000601319 PSMG3Q9BT73 122 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms