RNA–Protein interactions for RNA: ENST00000595689.2

SSX4-201, Transcript of SSX family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4-201ENST00000595689 LRRC20Q8TCA0 184 aa4.16□□□□□ -1.74
SSX4-201ENST00000595689 CHAC2Q8WUX2 184 aa4.16□□□□□ -1.74
SSX4-201ENST00000595689 RPUSD4Q96CM3 377 aaKnown RBP4.16□□□□□ -1.74
SSX4-201ENST00000595689 SAT2Q96F10 170 aaPredicted RBP4.16□□□□□ -1.74
SSX4-201ENST00000595689 SLC50A1Q9BRV3 221 aa4.16□□□□□ -1.74
SSX4-201ENST00000595689 NIPSNAP3BQ9BS92 247 aa4.16□□□□□ -1.74
SSX4-201ENST00000595689 MARVELD1Q9BSK0 173 aa4.16□□□□□ -1.74
SSX4-201ENST00000595689 TMEM208Q9BTX3 173 aa4.16□□□□□ -1.74
SSX4-201ENST00000595689 NPCDR1Q9BY65 106 aa4.16□□□□□ -1.74
SSX4-201ENST00000595689 NMES1Q9C002 83 aa4.16□□□□□ -1.74
SSX4-201ENST00000595689 DNAJC4Q9NNZ3 241 aa4.16□□□□□ -1.74
SSX4-201ENST00000595689 SLC39A9Q9NUM3 307 aa4.16□□□□□ -1.74
SSX4-201ENST00000595689 ZNF586Q9NXT0 402 aa4.16□□□□□ -1.74
SSX4-201ENST00000595689 RNF24Q9Y225 148 aa4.16□□□□□ -1.74
SSX4-201ENST00000595689 PXMP4Q9Y6I8 212 aa4.16□□□□□ -1.74
SSX4-201ENST00000595689 VPS13DQ5THJ4 4388 aa4.16□□□□□ -1.74
SSX4-201ENST00000595689 KMT2AQ03164 3969 aa4.15□□□□□ -1.74
SSX4-201ENST00000595689 TEX48A0A1B0GUV7 120 aa4.15□□□□□ -1.75
SSX4-201ENST00000595689 E5RGE8 158 aa4.15□□□□□ -1.75
SSX4-201ENST00000595689 PYYP10082 97 aa4.15□□□□□ -1.75
SSX4-201ENST00000595689 AZU1P20160 251 aa4.15□□□□□ -1.75
SSX4-201ENST00000595689 RAB31Q13636 194 aa4.15□□□□□ -1.75
SSX4-201ENST00000595689 CLINT1Q14677 625 aa4.15□□□□□ -1.75
SSX4-201ENST00000595689 OXA1LQ15070 435 aa4.15□□□□□ -1.75
SSX4-201ENST00000595689 ATP6V1FQ16864 119 aa4.15□□□□□ -1.75
SSX4-201ENST00000595689 OR5C1Q8NGR4 320 aa4.15□□□□□ -1.75
SSX4-201ENST00000595689 PFDN5Q99471 154 aa4.15□□□□□ -1.75
SSX4-201ENST00000595689 NDUFAF3Q9BU61 184 aa4.15□□□□□ -1.75
SSX4-201ENST00000595689 SLC25A2Q9BXI2 301 aa4.15□□□□□ -1.75
SSX4-201ENST00000595689 TRBV19A0A075B6N1 114 aa4.14□□□□□ -1.75
SSX4-201ENST00000595689 NPIPB6E9PJ23 425 aa4.14□□□□□ -1.75
SSX4-201ENST00000595689 J3KRW8 73 aa4.14□□□□□ -1.75
SSX4-201ENST00000595689 M0R3E3 92 aa4.14□□□□□ -1.75
SSX4-201ENST00000595689 ZNF253O75346 499 aa4.14□□□□□ -1.75
SSX4-201ENST00000595689 MPDU1O75352 247 aa4.14□□□□□ -1.75
SSX4-201ENST00000595689 NDUFB4O95168 129 aa4.14□□□□□ -1.75
SSX4-201ENST00000595689 RLN2P04090 185 aa4.14□□□□□ -1.75
SSX4-201ENST00000595689 HTN3P15516 51 aa4.14□□□□□ -1.75
SSX4-201ENST00000595689 TSPOP30536 169 aa4.14□□□□□ -1.75
SSX4-201ENST00000595689 CDKN1BP46527 198 aa4.14□□□□□ -1.75
SSX4-201ENST00000595689 DAD1P61803 113 aa4.14□□□□□ -1.75
SSX4-201ENST00000595689 FCN2Q15485 313 aa4.14□□□□□ -1.75
SSX4-201ENST00000595689 GFI1BQ5VTD9 330 aa4.14□□□□□ -1.75
SSX4-201ENST00000595689 MIR17HGQ75NE6 70 aa4.14□□□□□ -1.75
SSX4-201ENST00000595689 OR10J6PQ8NGY7 276 aa4.14□□□□□ -1.75
SSX4-201ENST00000595689 PPP1R1CQ8WVI7 109 aa4.14□□□□□ -1.75
SSX4-201ENST00000595689 FAM167A-AS1Q96KT0 104 aa4.14□□□□□ -1.75
SSX4-201ENST00000595689 LINC01587Q99440 93 aa4.14□□□□□ -1.75
SSX4-201ENST00000595689 WDR61Q9GZS3 305 aaKnown RBP4.14□□□□□ -1.75
SSX4-201ENST00000595689 SLC25A31Q9H0C2 315 aa4.14□□□□□ -1.75
SSX4-201ENST00000595689 PPP1R14DQ9NXH3 145 aa4.14□□□□□ -1.75
SSX4-201ENST00000595689 TMEM14CQ9P0S9 112 aa4.14□□□□□ -1.75
SSX4-201ENST00000595689 DNAH6Q9C0G6 4158 aa4.13□□□□□ -1.75
SSX4-201ENST00000595689 LYRM9A8MSI8 78 aa4.13□□□□□ -1.75
SSX4-201ENST00000595689 SSNA1O43805 119 aa4.13□□□□□ -1.75
SSX4-201ENST00000595689 MPC2O95563 127 aa4.13□□□□□ -1.75
SSX4-201ENST00000595689 P0DMU3 169 aa4.13□□□□□ -1.75
SSX4-201ENST00000595689 FAM231AP0DMU4 169 aa4.13□□□□□ -1.75
SSX4-201ENST00000595689 FAM231CP0DMU5 169 aa4.13□□□□□ -1.75
SSX4-201ENST00000595689 CT45A10P0DMU9 189 aa4.13□□□□□ -1.75
SSX4-201ENST00000595689 DEFB130BP0DP73 79 aa4.13□□□□□ -1.75
SSX4-201ENST00000595689 DEFB130AP0DP74 79 aa4.13□□□□□ -1.75
SSX4-201ENST00000595689 HIST1H1EP10412 219 aaKnown RBP4.13□□□□□ -1.75
SSX4-201ENST00000595689 HTN1P15515 57 aa4.13□□□□□ -1.75
SSX4-201ENST00000595689 TAS2R60P59551 318 aa4.13□□□□□ -1.75
SSX4-201ENST00000595689 DEFA1P59665 94 aa4.13□□□□□ -1.75
SSX4-201ENST00000595689 DEFA3P59666 94 aa4.13□□□□□ -1.75
SSX4-201ENST00000595689 CYCSP99999 105 aaKnown RBP4.13□□□□□ -1.75
SSX4-201ENST00000595689 ERCC8Q13216 396 aa4.13□□□□□ -1.75
SSX4-201ENST00000595689 GUK1Q16774 197 aa4.13□□□□□ -1.75
SSX4-201ENST00000595689 TMEM88Q6PEY1 159 aa4.13□□□□□ -1.75
SSX4-201ENST00000595689 TMEM256Q8N2U0 113 aa4.13□□□□□ -1.75
SSX4-201ENST00000595689 EXOC3-AS1Q8N2X6 119 aa4.13□□□□□ -1.75
SSX4-201ENST00000595689 RNASE8Q8TDE3 154 aaKnown RBP4.13□□□□□ -1.75
SSX4-201ENST00000595689 BLNKQ8WV28 456 aa4.13□□□□□ -1.75
SSX4-201ENST00000595689 C16orf74Q96GX8 76 aa4.13□□□□□ -1.75
SSX4-201ENST00000595689 ATP5SQ99766 215 aa4.13□□□□□ -1.75
SSX4-201ENST00000595689 SMIM3Q9BZL3 60 aa4.13□□□□□ -1.75
SSX4-201ENST00000595689 BATF3Q9NR55 127 aa4.13□□□□□ -1.75
SSX4-201ENST00000595689 MBD2Q9UBB5 411 aa4.13□□□□□ -1.75
SSX4-201ENST00000595689 HSPB11Q9Y547 144 aa4.13□□□□□ -1.75
SSX4-201ENST00000595689 DNAH10Q8IVF4 4471 aa4.12□□□□□ -1.75
SSX4-201ENST00000595689 IGKV2-40A0A087WW87 121 aaPredicted RBP4.12□□□□□ -1.75
SSX4-201ENST00000595689 TRAV12-3A0A0B4J271 114 aa4.12□□□□□ -1.75
SSX4-201ENST00000595689 H7BYZ3 331 aa4.12□□□□□ -1.75
SSX4-201ENST00000595689 EIF3GO75821 320 aaKnown RBP eCLIP4.12□□□□□ -1.75
SSX4-201ENST00000595689 IGKV2D-40P01614 121 aaPredicted RBP4.12□□□□□ -1.75
SSX4-201ENST00000595689 OR10J4P0C629 311 aa4.12□□□□□ -1.75
SSX4-201ENST00000595689 RPL12P30050 165 aaKnown RBP4.12□□□□□ -1.75
SSX4-201ENST00000595689 LEPP41159 167 aa4.12□□□□□ -1.75
SSX4-201ENST00000595689 BTN1A1Q13410 526 aa4.12□□□□□ -1.75
SSX4-201ENST00000595689 PDE6HQ13956 83 aa4.12□□□□□ -1.75
SSX4-201ENST00000595689 ICAM4Q14773 271 aa4.12□□□□□ -1.75
SSX4-201ENST00000595689 FAM122CQ6P4D5 195 aa4.12□□□□□ -1.75
SSX4-201ENST00000595689 POM121L12Q8N7R1 296 aa4.12□□□□□ -1.75
SSX4-201ENST00000595689 TMEM263Q8WUH6 116 aaKnown RBP4.12□□□□□ -1.75
SSX4-201ENST00000595689 FXYD5Q96DB9 178 aa4.12□□□□□ -1.75
SSX4-201ENST00000595689 MRPL53Q96EL3 112 aaKnown RBP4.12□□□□□ -1.75
SSX4-201ENST00000595689 ZNF503Q96F45 646 aa4.12□□□□□ -1.75
SSX4-201ENST00000595689 PHYHIPLQ96FC7 376 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms