RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 WDR83OSQ9Y284 106 aa12.14□□□□□ -0.47
RETREG3-210ENST00000590541 EPM2AB3EWF7 344 aa12.13□□□□□ -0.47
RETREG3-210ENST00000590541 MRPS12O15235 138 aaKnown RBP12.13□□□□□ -0.47
RETREG3-210ENST00000590541 RLN2P04090 185 aa12.13□□□□□ -0.47
RETREG3-210ENST00000590541 RPL29P47914 159 aaKnown RBP12.13□□□□□ -0.47
RETREG3-210ENST00000590541 TMEM252Q8N6L7 170 aa12.13□□□□□ -0.47
RETREG3-210ENST00000590541 TMEM37Q8WXS4 190 aa12.13□□□□□ -0.47
RETREG3-210ENST00000590541 TMEM208Q9BTX3 173 aa12.13□□□□□ -0.47
RETREG3-210ENST00000590541 DMBT1Q9UGM3 2413 aaPredicted RBP12.12□□□□□ -0.47
RETREG3-210ENST00000590541 MPDU1O75352 247 aa12.12□□□□□ -0.47
RETREG3-210ENST00000590541 INSP01308 110 aa12.12□□□□□ -0.47
RETREG3-210ENST00000590541 CYCSP99999 105 aaKnown RBP12.12□□□□□ -0.47
RETREG3-210ENST00000590541 GUK1Q16774 197 aa12.12□□□□□ -0.47
RETREG3-210ENST00000590541 IGFL4Q6B9Z1 124 aa12.12□□□□□ -0.47
RETREG3-210ENST00000590541 OR8A1Q8NGG7 326 aa12.12□□□□□ -0.47
RETREG3-210ENST00000590541 ZNF331Q9NQX6 463 aaPredicted RBP12.12□□□□□ -0.47
RETREG3-210ENST00000590541 PPP1R14DQ9NXH3 145 aa12.12□□□□□ -0.47
RETREG3-210ENST00000590541 LINC00588Q9Y4M8 146 aa12.12□□□□□ -0.47
RETREG3-210ENST00000590541 FAT1Q14517 4588 aa12.11□□□□□ -0.47
RETREG3-210ENST00000590541 BOLA2-SMG1P6H3BVE0 249 aa12.11□□□□□ -0.47
RETREG3-210ENST00000590541 TMEM256Q8N2U0 113 aa12.11□□□□□ -0.47
RETREG3-210ENST00000590541 NMES1Q9C002 83 aa12.11□□□□□ -0.47
RETREG3-210ENST00000590541 PXMP4Q9Y6I8 212 aa12.11□□□□□ -0.47
RETREG3-210ENST00000590541 IGSF23A1L1A6 192 aa12.1□□□□□ -0.47
RETREG3-210ENST00000590541 INAFM2P0DMQ5 153 aa12.1□□□□□ -0.47
RETREG3-210ENST00000590541 TSPOP30536 169 aa12.1□□□□□ -0.47
RETREG3-210ENST00000590541 RHOBP62745 196 aa12.1□□□□□ -0.47
RETREG3-210ENST00000590541 HIST1H1AQ02539 215 aaPredicted RBP12.1□□□□□ -0.47
RETREG3-210ENST00000590541 BAXQ07812 192 aa12.1□□□□□ -0.47
RETREG3-210ENST00000590541 SPINK13Q1W4C9 94 aa12.1□□□□□ -0.47
RETREG3-210ENST00000590541 RPUSD4Q96CM3 377 aaKnown RBP12.1□□□□□ -0.47
RETREG3-210ENST00000590541 SLC25A31Q9H0C2 315 aa12.1□□□□□ -0.47
RETREG3-210ENST00000590541 SLC39A9Q9NUM3 307 aa12.1□□□□□ -0.47
RETREG3-210ENST00000590541 UBE2L5PA0A1B0GUS4 154 aa12.09□□□□□ -0.47
RETREG3-210ENST00000590541 E5RGE8 158 aa12.09□□□□□ -0.47
RETREG3-210ENST00000590541 M0R2Z0 102 aa12.09□□□□□ -0.47
RETREG3-210ENST00000590541 CRXO43186 299 aaPredicted RBP12.09□□□□□ -0.47
RETREG3-210ENST00000590541 NUDT3O95989 172 aa12.09□□□□□ -0.47
RETREG3-210ENST00000590541 DEFA1P59665 94 aa12.09□□□□□ -0.47
RETREG3-210ENST00000590541 DEFA3P59666 94 aa12.09□□□□□ -0.47
RETREG3-210ENST00000590541 OPCMLQ14982 345 aa12.09□□□□□ -0.47
RETREG3-210ENST00000590541 MIC13Q5XKP0 118 aa12.09□□□□□ -0.47
RETREG3-210ENST00000590541 KRTAP1-5Q9BYS1 174 aa12.09□□□□□ -0.47
RETREG3-210ENST00000590541 BATF3Q9NR55 127 aa12.09□□□□□ -0.47
RETREG3-210ENST00000590541 INMT-MINDY4F8WBC2 141 aa12.08□□□□□ -0.48
RETREG3-210ENST00000590541 ZNF253O75346 499 aa12.08□□□□□ -0.48
RETREG3-210ENST00000590541 IGLC2P0DOY2 106 aa12.08□□□□□ -0.48
RETREG3-210ENST00000590541 CCL18P55774 89 aa12.08□□□□□ -0.48
RETREG3-210ENST00000590541 C20orf144Q9BQM9 153 aa12.08□□□□□ -0.48
RETREG3-210ENST00000590541 MARVELD1Q9BSK0 173 aa12.08□□□□□ -0.48
RETREG3-210ENST00000590541 LYRM9A8MSI8 78 aa12.07□□□□□ -0.48
RETREG3-210ENST00000590541 PRM2P04554 102 aa12.07□□□□□ -0.48
RETREG3-210ENST00000590541 FGF7P21781 194 aa12.07□□□□□ -0.48
RETREG3-210ENST00000590541 CDKN1BP46527 198 aa12.07□□□□□ -0.48
RETREG3-210ENST00000590541 IFITM3Q01628 133 aa12.07□□□□□ -0.48
RETREG3-210ENST00000590541 OR10J6PQ8NGY7 276 aa12.07□□□□□ -0.48
RETREG3-210ENST00000590541 SAT2Q96F10 170 aaPredicted RBP12.07□□□□□ -0.48
RETREG3-210ENST00000590541 F5H768 121 aa12.06□□□□□ -0.48
RETREG3-210ENST00000590541 BTF3P20290 206 aaKnown RBP12.06□□□□□ -0.48
RETREG3-210ENST00000590541 MORN5Q5VZ52 161 aa12.06□□□□□ -0.48
RETREG3-210ENST00000590541 Q9H8V8 135 aa12.06□□□□□ -0.48
RETREG3-210ENST00000590541 KCNIP2Q9NS61 270 aa12.06□□□□□ -0.48
RETREG3-210ENST00000590541 TMEM14CQ9P0S9 112 aa12.06□□□□□ -0.48
RETREG3-210ENST00000590541 MYCBP2O75592 4640 aa12.05□□□□□ -0.48
RETREG3-210ENST00000590541 PET100P0DJ07 73 aa12.05□□□□□ -0.48
RETREG3-210ENST00000590541 DEFB130BP0DP73 79 aa12.05□□□□□ -0.48
RETREG3-210ENST00000590541 DEFB130AP0DP74 79 aa12.05□□□□□ -0.48
RETREG3-210ENST00000590541 TAS2R60P59551 318 aa12.05□□□□□ -0.48
RETREG3-210ENST00000590541 SSX7Q7RTT5 188 aa12.05□□□□□ -0.48
RETREG3-210ENST00000590541 BAP18Q8IXM2 172 aa12.05□□□□□ -0.48
RETREG3-210ENST00000590541 RNF141Q8WVD5 230 aa12.05□□□□□ -0.48
RETREG3-210ENST00000590541 MRPL53Q96EL3 112 aaKnown RBP12.05□□□□□ -0.48
RETREG3-210ENST00000590541 LINC01587Q99440 93 aa12.05□□□□□ -0.48
RETREG3-210ENST00000590541 NPCDR1Q9BY65 106 aa12.05□□□□□ -0.48
RETREG3-210ENST00000590541 TRAV12-2A0A075B6T6 113 aa12.04□□□□□ -0.48
RETREG3-210ENST00000590541 ZNF705GA8MUZ8 300 aaPredicted RBP12.04□□□□□ -0.48
RETREG3-210ENST00000590541 H3BQ15 152 aa12.04□□□□□ -0.48
RETREG3-210ENST00000590541 SIX6O95475 246 aa12.04□□□□□ -0.48
RETREG3-210ENST00000590541 NHLH2Q02577 135 aa12.04□□□□□ -0.48
RETREG3-210ENST00000590541 PDE6HQ13956 83 aa12.04□□□□□ -0.48
RETREG3-210ENST00000590541 ZNF493Q6ZR52 646 aa12.04□□□□□ -0.48
RETREG3-210ENST00000590541 LYPD1Q8N2G4 141 aa12.04□□□□□ -0.48
RETREG3-210ENST00000590541 OR5C1Q8NGR4 320 aa12.04□□□□□ -0.48
RETREG3-210ENST00000590541 ODF3Q96PU9 254 aa12.04□□□□□ -0.48
RETREG3-210ENST00000590541 PLAC8L1A1L4L8 177 aa12.03□□□□□ -0.48
RETREG3-210ENST00000590541 H7BYZ3 331 aa12.03□□□□□ -0.48
RETREG3-210ENST00000590541 SLC17A3O00476 420 aa12.03□□□□□ -0.48
RETREG3-210ENST00000590541 HIST1H1EP10412 219 aaKnown RBP12.03□□□□□ -0.48
RETREG3-210ENST00000590541 FCN2Q15485 313 aa12.03□□□□□ -0.48
RETREG3-210ENST00000590541 LRRC37A5PQ49AS3 106 aa12.03□□□□□ -0.48
RETREG3-210ENST00000590541 C16orf74Q96GX8 76 aa12.03□□□□□ -0.48
RETREG3-210ENST00000590541 PRELID1Q9Y255 219 aa12.03□□□□□ -0.48
RETREG3-210ENST00000590541 TRBV19A0A075B6N1 114 aa12.02□□□□□ -0.49
RETREG3-210ENST00000590541 TRAV5A0A0B4J249 113 aa12.02□□□□□ -0.49
RETREG3-210ENST00000590541 ATP5G1P05496 136 aa12.02□□□□□ -0.49
RETREG3-210ENST00000590541 ATP5G3P48201 142 aa12.02□□□□□ -0.49
RETREG3-210ENST00000590541 XGP55808 180 aa12.02□□□□□ -0.49
RETREG3-210ENST00000590541 Q9H3A6 140 aa12.02□□□□□ -0.49
RETREG3-210ENST00000590541 ZNF586Q9NXT0 402 aa12.02□□□□□ -0.49
RETREG3-210ENST00000590541 OR5AC2Q9NZP5 309 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms