RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 CHAC2Q8WUX2 184 aa12.89□□□□□ -0.35
CIRBP-227ENST00000590188 WDR61Q9GZS3 305 aaKnown RBP12.89□□□□□ -0.35
CIRBP-227ENST00000590188 MBD2Q9UBB5 411 aa12.89□□□□□ -0.35
CIRBP-227ENST00000590188 VPS13DQ5THJ4 4388 aa12.88□□□□□ -0.35
CIRBP-227ENST00000590188 LGALS9CQ6DKI2 356 aa12.88□□□□□ -0.35
CIRBP-227ENST00000590188 MIR17HGQ75NE6 70 aa12.88□□□□□ -0.35
CIRBP-227ENST00000590188 BLNKQ8WV28 456 aa12.88□□□□□ -0.35
CIRBP-227ENST00000590188 DKK2Q9UBU2 259 aa12.88□□□□□ -0.35
CIRBP-227ENST00000590188 HSPB11Q9Y547 144 aa12.88□□□□□ -0.35
CIRBP-227ENST00000590188 J3KRW8 73 aa12.87□□□□□ -0.35
CIRBP-227ENST00000590188 PET100P0DJ07 73 aa12.87□□□□□ -0.35
CIRBP-227ENST00000590188 HTN1P15515 57 aa12.87□□□□□ -0.35
CIRBP-227ENST00000590188 HTN3P15516 51 aa12.87□□□□□ -0.35
CIRBP-227ENST00000590188 KIR3DS1Q14943 382 aa12.87□□□□□ -0.35
CIRBP-227ENST00000590188 OR10J6PQ8NGY7 276 aa12.87□□□□□ -0.35
CIRBP-227ENST00000590188 LINC01587Q99440 93 aa12.87□□□□□ -0.35
CIRBP-227ENST00000590188 ATP5SQ99766 215 aa12.87□□□□□ -0.35
CIRBP-227ENST00000590188 SLC25A2Q9BXI2 301 aa12.87□□□□□ -0.35
CIRBP-227ENST00000590188 RPL12P30050 165 aaKnown RBP12.86□□□□□ -0.35
CIRBP-227ENST00000590188 GUK1Q16774 197 aa12.86□□□□□ -0.35
CIRBP-227ENST00000590188 NIPSNAP3BQ9BS92 247 aa12.86□□□□□ -0.35
CIRBP-227ENST00000590188 TIMM9Q9Y5J7 89 aa12.86□□□□□ -0.35
CIRBP-227ENST00000590188 TRBV19A0A075B6N1 114 aa12.85□□□□□ -0.35
CIRBP-227ENST00000590188 C17orf112F2Z3M2 114 aa12.85□□□□□ -0.35
CIRBP-227ENST00000590188 M0R3E3 92 aa12.85□□□□□ -0.35
CIRBP-227ENST00000590188 PTTG1O95997 202 aa12.85□□□□□ -0.35
CIRBP-227ENST00000590188 HIST1H1EP10412 219 aaKnown RBP12.85□□□□□ -0.35
CIRBP-227ENST00000590188 AZU1P20160 251 aa12.85□□□□□ -0.35
CIRBP-227ENST00000590188 CDKN1BP46527 198 aa12.85□□□□□ -0.35
CIRBP-227ENST00000590188 TMEM14CQ9P0S9 112 aa12.85□□□□□ -0.35
CIRBP-227ENST00000590188 BIRC6Q9NR09 4857 aa12.85□□□□□ -0.35
CIRBP-227ENST00000590188 NDUFB4O95168 129 aa12.84□□□□□ -0.35
CIRBP-227ENST00000590188 TCTAP57738 103 aa12.84□□□□□ -0.35
CIRBP-227ENST00000590188 FCN2Q15485 313 aa12.84□□□□□ -0.35
CIRBP-227ENST00000590188 EXOC3-AS1Q8N2X6 119 aa12.84□□□□□ -0.35
CIRBP-227ENST00000590188 KCNIP2Q9NS61 270 aa12.84□□□□□ -0.35
CIRBP-227ENST00000590188 TEX48A0A1B0GUV7 120 aa12.83□□□□□ -0.36
CIRBP-227ENST00000590188 EIF3GO75821 320 aaKnown RBP eCLIP12.83□□□□□ -0.36
CIRBP-227ENST00000590188 IFNA5P01569 189 aa12.83□□□□□ -0.36
CIRBP-227ENST00000590188 DAD1P61803 113 aa12.83□□□□□ -0.36
CIRBP-227ENST00000590188 ERCC8Q13216 396 aa12.83□□□□□ -0.36
CIRBP-227ENST00000590188 FFAR4Q5NUL3 377 aa12.83□□□□□ -0.36
CIRBP-227ENST00000590188 FAM167A-AS1Q96KT0 104 aa12.83□□□□□ -0.36
CIRBP-227ENST00000590188 WFDC1Q9HC57 220 aa12.83□□□□□ -0.36
CIRBP-227ENST00000590188 ZNF253O75346 499 aa12.82□□□□□ -0.36
CIRBP-227ENST00000590188 OR10J4P0C629 311 aa12.82□□□□□ -0.36
CIRBP-227ENST00000590188 CT45A10P0DMU9 189 aa12.82□□□□□ -0.36
CIRBP-227ENST00000590188 SCGB1C1Q8TD33 95 aa12.82□□□□□ -0.36
CIRBP-227ENST00000590188 MED28Q9H204 178 aa12.82□□□□□ -0.36
CIRBP-227ENST00000590188 OR51M1Q9H341 326 aa12.82□□□□□ -0.36
CIRBP-227ENST00000590188 FUT9Q9Y231 359 aa12.82□□□□□ -0.36
CIRBP-227ENST00000590188 ICAM4Q14773 271 aa12.81□□□□□ -0.36
CIRBP-227ENST00000590188 GFI1BQ5VTD9 330 aa12.81□□□□□ -0.36
CIRBP-227ENST00000590188 FAM122CQ6P4D5 195 aa12.81□□□□□ -0.36
CIRBP-227ENST00000590188 NDUFAF3Q9BU61 184 aa12.81□□□□□ -0.36
CIRBP-227ENST00000590188 PAXXQ9BUH6 204 aa12.81□□□□□ -0.36
CIRBP-227ENST00000590188 MRPL32Q9BYC8 188 aaKnown RBP12.81□□□□□ -0.36
CIRBP-227ENST00000590188 DNAH6Q9C0G6 4158 aa12.81□□□□□ -0.36
CIRBP-227ENST00000590188 NPIPB6E9PJ23 425 aa12.8□□□□□ -0.36
CIRBP-227ENST00000590188 OR7C2O60412 319 aa12.8□□□□□ -0.36
CIRBP-227ENST00000590188 DEFB130BP0DP73 79 aa12.8□□□□□ -0.36
CIRBP-227ENST00000590188 DEFB130AP0DP74 79 aa12.8□□□□□ -0.36
CIRBP-227ENST00000590188 TSPOP30536 169 aa12.8□□□□□ -0.36
CIRBP-227ENST00000590188 TAS2R60P59551 318 aa12.8□□□□□ -0.36
CIRBP-227ENST00000590188 TMEM256Q8N2U0 113 aa12.8□□□□□ -0.36
CIRBP-227ENST00000590188 AAMDCQ9H7C9 122 aa12.8□□□□□ -0.36
CIRBP-227ENST00000590188 DNAH10Q8IVF4 4471 aa12.8□□□□□ -0.36
CIRBP-227ENST00000590188 IGKV2-40A0A087WW87 121 aaPredicted RBP12.79□□□□□ -0.36
CIRBP-227ENST00000590188 TRAV12-3A0A0B4J271 114 aa12.79□□□□□ -0.36
CIRBP-227ENST00000590188 PLAC8L1A1L4L8 177 aa12.79□□□□□ -0.36
CIRBP-227ENST00000590188 IGKV2D-40P01614 121 aaPredicted RBP12.79□□□□□ -0.36
CIRBP-227ENST00000590188 NBEAP1P0C6P0 100 aa12.79□□□□□ -0.36
CIRBP-227ENST00000590188 LEPP41159 167 aa12.79□□□□□ -0.36
CIRBP-227ENST00000590188 PDE6HQ13956 83 aa12.79□□□□□ -0.36
CIRBP-227ENST00000590188 RNF141Q8WVD5 230 aa12.79□□□□□ -0.36
CIRBP-227ENST00000590188 FXYD5Q96DB9 178 aa12.79□□□□□ -0.36
CIRBP-227ENST00000590188 MRPL53Q96EL3 112 aaKnown RBP12.79□□□□□ -0.36
CIRBP-227ENST00000590188 PHYHIPLQ96FC7 376 aa12.79□□□□□ -0.36
CIRBP-227ENST00000590188 H7BYZ3 331 aa12.78□□□□□ -0.36
CIRBP-227ENST00000590188 C16orf74Q96GX8 76 aa12.78□□□□□ -0.36
CIRBP-227ENST00000590188 PRELID1Q9Y255 219 aa12.78□□□□□ -0.36
CIRBP-227ENST00000590188 LYRM9A8MSI8 78 aa12.77□□□□□ -0.37
CIRBP-227ENST00000590188 UBE2L3P68036 154 aaKnown RBP12.77□□□□□ -0.37
CIRBP-227ENST00000590188 OXA1LQ15070 435 aa12.77□□□□□ -0.37
CIRBP-227ENST00000590188 Q5BKY6 102 aa12.77□□□□□ -0.37
CIRBP-227ENST00000590188 ZNF503Q96F45 646 aa12.77□□□□□ -0.37
CIRBP-227ENST00000590188 AGPAT4-IT1Q9H0P7 198 aa12.77□□□□□ -0.37
CIRBP-227ENST00000590188 TMEM88Q6PEY1 159 aa12.76□□□□□ -0.37
CIRBP-227ENST00000590188 ODF3Q96PU9 254 aa12.76□□□□□ -0.37
CIRBP-227ENST00000590188 VGLL1Q99990 258 aa12.76□□□□□ -0.37
CIRBP-227ENST00000590188 NOP10Q9NPE3 64 aaKnown RBP12.76□□□□□ -0.37
CIRBP-227ENST00000590188 RAB2AP61019 212 aa12.75□□□□□ -0.37
CIRBP-227ENST00000590188 RANP62826 216 aaKnown RBP12.75□□□□□ -0.37
CIRBP-227ENST00000590188 BTN1A1Q13410 526 aa12.75□□□□□ -0.37
CIRBP-227ENST00000590188 RNASE8Q8TDE3 154 aaKnown RBP12.75□□□□□ -0.37
CIRBP-227ENST00000590188 TMEM263Q8WUH6 116 aaKnown RBP12.75□□□□□ -0.37
CIRBP-227ENST00000590188 C20orf144Q9BQM9 153 aa12.75□□□□□ -0.37
CIRBP-227ENST00000590188 CD300CQ08708 224 aa12.74□□□□□ -0.37
CIRBP-227ENST00000590188 ACOT6Q3I5F7 207 aaPredicted RBP12.74□□□□□ -0.37
CIRBP-227ENST00000590188 KHDC3LQ587J8 217 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms