RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 PLECQ15149 4684 aaKnown RBP10.67□□□□□ -0.7
ATG4D-207ENST00000587256 TRAV12-2A0A075B6T6 113 aa10.67□□□□□ -0.7
ATG4D-207ENST00000587256 LOC102723971A0A1B0GUV8 181 aa10.67□□□□□ -0.7
ATG4D-207ENST00000587256 PRAC2D3DTV9 90 aa10.67□□□□□ -0.7
ATG4D-207ENST00000587256 PDE6HQ13956 83 aa10.67□□□□□ -0.7
ATG4D-207ENST00000587256 OXA1LQ15070 435 aa10.67□□□□□ -0.7
ATG4D-207ENST00000587256 RRN3P1Q2M238 152 aa10.67□□□□□ -0.7
ATG4D-207ENST00000587256 PARD6GQ9BYG4 376 aaPredicted RBP10.67□□□□□ -0.7
ATG4D-207ENST00000587256 AAMDCQ9H7C9 122 aa10.67□□□□□ -0.7
ATG4D-207ENST00000587256 WFDC1Q9HC57 220 aa10.67□□□□□ -0.7
ATG4D-207ENST00000587256 C11orf94C9JXX5 98 aa10.66□□□□□ -0.7
ATG4D-207ENST00000587256 CRXO43186 299 aaPredicted RBP10.66□□□□□ -0.7
ATG4D-207ENST00000587256 OR7C2O60412 319 aa10.66□□□□□ -0.7
ATG4D-207ENST00000587256 ZNF266Q14584 549 aa10.66□□□□□ -0.7
ATG4D-207ENST00000587256 Q6ZTC4 211 aa10.66□□□□□ -0.7
ATG4D-207ENST00000587256 ZNF767PQ75MW2 155 aa10.66□□□□□ -0.7
ATG4D-207ENST00000587256 FAM167A-AS1Q96KT0 104 aa10.66□□□□□ -0.7
ATG4D-207ENST00000587256 AQP10Q96PS8 301 aa10.66□□□□□ -0.7
ATG4D-207ENST00000587256 PAXXQ9BUH6 204 aa10.66□□□□□ -0.7
ATG4D-207ENST00000587256 OR51M1Q9H341 326 aa10.66□□□□□ -0.7
ATG4D-207ENST00000587256 FXYD6-FXYD2A0A087WZ82 144 aa10.65□□□□□ -0.7
ATG4D-207ENST00000587256 M0R3E3 92 aa10.65□□□□□ -0.7
ATG4D-207ENST00000587256 NDUFB4O95168 129 aa10.65□□□□□ -0.7
ATG4D-207ENST00000587256 OR10J4P0C629 311 aa10.65□□□□□ -0.7
ATG4D-207ENST00000587256 SPART-AS1P0CW21 52 aa10.65□□□□□ -0.7
ATG4D-207ENST00000587256 CDKN1BP46527 198 aa10.65□□□□□ -0.7
ATG4D-207ENST00000587256 UBE2L3P68036 154 aaKnown RBP10.65□□□□□ -0.7
ATG4D-207ENST00000587256 KHDC3LQ587J8 217 aa10.65□□□□□ -0.7
ATG4D-207ENST00000587256 C2CD4CQ8TF44 421 aa10.65□□□□□ -0.7
ATG4D-207ENST00000587256 MRPL53Q96EL3 112 aaKnown RBP10.65□□□□□ -0.7
ATG4D-207ENST00000587256 DNAH1Q9P2D7 4330 aa10.65□□□□□ -0.71
ATG4D-207ENST00000587256 TRAV10A0A0B4J240 114 aa10.64□□□□□ -0.71
ATG4D-207ENST00000587256 TEX48A0A1B0GUV7 120 aa10.64□□□□□ -0.71
ATG4D-207ENST00000587256 TSPOP30536 169 aa10.64□□□□□ -0.71
ATG4D-207ENST00000587256 TAS2R45P59539 299 aa10.64□□□□□ -0.71
ATG4D-207ENST00000587256 ACOT6Q3I5F7 207 aaPredicted RBP10.64□□□□□ -0.71
ATG4D-207ENST00000587256 Q5BKY6 102 aa10.64□□□□□ -0.71
ATG4D-207ENST00000587256 EXOC3-AS1Q8N2X6 119 aa10.64□□□□□ -0.71
ATG4D-207ENST00000587256 RPP25LQ8N5L8 163 aaKnown RBP10.64□□□□□ -0.71
ATG4D-207ENST00000587256 HSD17B11Q8NBQ5 300 aa10.64□□□□□ -0.71
ATG4D-207ENST00000587256 INO80EQ8NBZ0 244 aaPredicted RBP10.64□□□□□ -0.71
ATG4D-207ENST00000587256 OR2T35Q8NGX2 323 aa10.64□□□□□ -0.71
ATG4D-207ENST00000587256 LINC00476Q8WZB0 136 aa10.64□□□□□ -0.71
ATG4D-207ENST00000587256 PRELID1Q9Y255 219 aa10.64□□□□□ -0.71
ATG4D-207ENST00000587256 ZNF705GA8MUZ8 300 aaPredicted RBP10.63□□□□□ -0.71
ATG4D-207ENST00000587256 NPIPB6E9PJ23 425 aa10.63□□□□□ -0.71
ATG4D-207ENST00000587256 NBEAP1P0C6P0 100 aa10.63□□□□□ -0.71
ATG4D-207ENST00000587256 LEPP41159 167 aa10.63□□□□□ -0.71
ATG4D-207ENST00000587256 ICAM4Q14773 271 aa10.63□□□□□ -0.71
ATG4D-207ENST00000587256 C12orf74Q32Q52 190 aa10.63□□□□□ -0.71
ATG4D-207ENST00000587256 TMEM256Q8N2U0 113 aa10.63□□□□□ -0.71
ATG4D-207ENST00000587256 RNF141Q8WVD5 230 aa10.63□□□□□ -0.71
ATG4D-207ENST00000587256 FXYD5Q96DB9 178 aa10.63□□□□□ -0.71
ATG4D-207ENST00000587256 PHYHIPLQ96FC7 376 aa10.63□□□□□ -0.71
ATG4D-207ENST00000587256 LINC01587Q99440 93 aa10.63□□□□□ -0.71
ATG4D-207ENST00000587256 YTHDF2Q9Y5A9 579 aaKnown RBP10.63□□□□□ -0.71
ATG4D-207ENST00000587256 J3KRW8 73 aa10.62□□□□□ -0.71
ATG4D-207ENST00000587256 LY6G6CO95867 125 aa10.62□□□□□ -0.71
ATG4D-207ENST00000587256 M6PRP20645 277 aa10.62□□□□□ -0.71
ATG4D-207ENST00000587256 RAB2AP61019 212 aa10.62□□□□□ -0.71
ATG4D-207ENST00000587256 FAM222AQ5U5X8 452 aa10.62□□□□□ -0.71
ATG4D-207ENST00000587256 FAM122CQ6P4D5 195 aa10.62□□□□□ -0.71
ATG4D-207ENST00000587256 A0A1W2PPV4 95 aa10.61□□□□□ -0.71
ATG4D-207ENST00000587256 IGLL5B9A064 214 aa10.61□□□□□ -0.71
ATG4D-207ENST00000587256 EIF3GO75821 320 aaKnown RBP eCLIP10.61□□□□□ -0.71
ATG4D-207ENST00000587256 HTN1P15515 57 aa10.61□□□□□ -0.71
ATG4D-207ENST00000587256 GFI1BQ5VTD9 330 aa10.61□□□□□ -0.71
ATG4D-207ENST00000587256 ODF3Q96PU9 254 aa10.61□□□□□ -0.71
ATG4D-207ENST00000587256 DKK2Q9UBU2 259 aa10.61□□□□□ -0.71
ATG4D-207ENST00000587256 IGKV2-40A0A087WW87 121 aaPredicted RBP10.6□□□□□ -0.71
ATG4D-207ENST00000587256 DEFB131BA0A096LNP1 70 aa10.6□□□□□ -0.71
ATG4D-207ENST00000587256 RNF222A6NCQ9 220 aa10.6□□□□□ -0.71
ATG4D-207ENST00000587256 IGKV2D-40P01614 121 aaPredicted RBP10.6□□□□□ -0.71
ATG4D-207ENST00000587256 CT45A10P0DMU9 189 aa10.6□□□□□ -0.71
ATG4D-207ENST00000587256 TAS2R60P59551 318 aa10.6□□□□□ -0.71
ATG4D-207ENST00000587256 ERCC8Q13216 396 aa10.6□□□□□ -0.71
ATG4D-207ENST00000587256 KIR3DS1Q14943 382 aa10.6□□□□□ -0.71
ATG4D-207ENST00000587256 OR10G4Q8NGN3 311 aa10.6□□□□□ -0.71
ATG4D-207ENST00000587256 OR10G9Q8NGN4 311 aa10.6□□□□□ -0.71
ATG4D-207ENST00000587256 OR10G7Q8NGN6 311 aa10.6□□□□□ -0.71
ATG4D-207ENST00000587256 ZNF503Q96F45 646 aa10.6□□□□□ -0.71
ATG4D-207ENST00000587256 C20orf144Q9BQM9 153 aa10.6□□□□□ -0.71
ATG4D-207ENST00000587256 NIPSNAP3BQ9BS92 247 aa10.6□□□□□ -0.71
ATG4D-207ENST00000587256 PSMG3Q9BT73 122 aaPredicted RBP10.6□□□□□ -0.71
ATG4D-207ENST00000587256 TNFSF18Q9UNG2 199 aa10.6□□□□□ -0.71
ATG4D-207ENST00000587256 HYDINQ4G0P3 5121 aa10.59□□□□□ -0.71
ATG4D-207ENST00000587256 BORCS7-ASMTA0A0B4J1R7 106 aa10.59□□□□□ -0.71
ATG4D-207ENST00000587256 H7BYZ3 331 aa10.59□□□□□ -0.71
ATG4D-207ENST00000587256 PRM2P04554 102 aa10.59□□□□□ -0.71
ATG4D-207ENST00000587256 ATP6V0CP27449 155 aa10.59□□□□□ -0.71
ATG4D-207ENST00000587256 CSN1S1P47710 185 aa10.59□□□□□ -0.71
ATG4D-207ENST00000587256 CDC34P49427 236 aaPredicted RBP10.59□□□□□ -0.71
ATG4D-207ENST00000587256 TCTAP57738 103 aa10.59□□□□□ -0.71
ATG4D-207ENST00000587256 RANP62826 216 aaKnown RBP10.59□□□□□ -0.71
ATG4D-207ENST00000587256 TMEM78Q5T7P6 136 aa10.59□□□□□ -0.71
ATG4D-207ENST00000587256 OR2G3Q8NGZ4 309 aa10.59□□□□□ -0.71
ATG4D-207ENST00000587256 C16orf74Q96GX8 76 aa10.59□□□□□ -0.71
ATG4D-207ENST00000587256 Q9H3A6 140 aa10.59□□□□□ -0.71
ATG4D-207ENST00000587256 IGHV4-4A0A075B6R2 117 aa10.58□□□□□ -0.72
ATG4D-207ENST00000587256 ARPC5O15511 151 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms