RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 INSP01308 110 aa10.41□□□□□ -0.74
MKS1-207ENST00000578789 NANOS2P60321 138 aaKnown RBP10.41□□□□□ -0.74
MKS1-207ENST00000578789 RHOBP62745 196 aa10.41□□□□□ -0.74
MKS1-207ENST00000578789 CEMP1Q6PRD7 247 aaPredicted RBP10.41□□□□□ -0.74
MKS1-207ENST00000578789 OR2G3Q8NGZ4 309 aa10.41□□□□□ -0.74
MKS1-207ENST00000578789 FXYD5Q96DB9 178 aa10.41□□□□□ -0.74
MKS1-207ENST00000578789 ZNF503Q96F45 646 aa10.41□□□□□ -0.74
MKS1-207ENST00000578789 PAXXQ9BUH6 204 aa10.41□□□□□ -0.74
MKS1-207ENST00000578789 PRELID1Q9Y255 219 aa10.41□□□□□ -0.74
MKS1-207ENST00000578789 RFNGQ9Y644 331 aa10.41□□□□□ -0.74
MKS1-207ENST00000578789 RYR3Q15413 4870 aa10.41□□□□□ -0.74
MKS1-207ENST00000578789 LYSTQ99698 3801 aa10.4□□□□□ -0.74
MKS1-207ENST00000578789 M6PRP20645 277 aa10.4□□□□□ -0.74
MKS1-207ENST00000578789 ACOT6Q3I5F7 207 aaPredicted RBP10.4□□□□□ -0.74
MKS1-207ENST00000578789 KHDC3LQ587J8 217 aa10.4□□□□□ -0.74
MKS1-207ENST00000578789 BAP18Q8IXM2 172 aa10.4□□□□□ -0.74
MKS1-207ENST00000578789 INO80EQ8NBZ0 244 aaPredicted RBP10.4□□□□□ -0.74
MKS1-207ENST00000578789 OR10J6PQ8NGY7 276 aa10.4□□□□□ -0.74
MKS1-207ENST00000578789 PHLDA1Q8WV24 401 aaPredicted RBP10.4□□□□□ -0.74
MKS1-207ENST00000578789 PSMG3Q9BT73 122 aaPredicted RBP10.4□□□□□ -0.74
MKS1-207ENST00000578789 SACSQ9NZJ4 4579 aa10.4□□□□□ -0.74
MKS1-207ENST00000578789 RYR2Q92736 4967 aa10.4□□□□□ -0.75
MKS1-207ENST00000578789 PLECQ15149 4684 aaKnown RBP10.4□□□□□ -0.75
MKS1-207ENST00000578789 IGHV3OR16-12A0A075B7B8 117 aa10.39□□□□□ -0.75
MKS1-207ENST00000578789 TMEM189A5PLL7 270 aa10.39□□□□□ -0.75
MKS1-207ENST00000578789 NPIPB6E9PJ23 425 aa10.39□□□□□ -0.75
MKS1-207ENST00000578789 M0R3E3 92 aa10.39□□□□□ -0.75
MKS1-207ENST00000578789 OR7C2O60412 319 aa10.39□□□□□ -0.75
MKS1-207ENST00000578789 NBEAP1P0C6P0 100 aa10.39□□□□□ -0.75
MKS1-207ENST00000578789 PRB4P10163 310 aaPredicted RBP10.39□□□□□ -0.75
MKS1-207ENST00000578789 TAS2R45P59539 299 aa10.39□□□□□ -0.75
MKS1-207ENST00000578789 BLNKQ8WV28 456 aa10.39□□□□□ -0.75
MKS1-207ENST00000578789 RNF141Q8WVD5 230 aa10.39□□□□□ -0.75
MKS1-207ENST00000578789 ODF3Q96PU9 254 aa10.39□□□□□ -0.75
MKS1-207ENST00000578789 PPP1R14DQ9NXH3 145 aa10.39□□□□□ -0.75
MKS1-207ENST00000578789 CELA1Q9UNI1 258 aa10.39□□□□□ -0.75
MKS1-207ENST00000578789 ALMS1Q8TCU4 4167 aa10.38□□□□□ -0.75
MKS1-207ENST00000578789 TRAV12-2A0A075B6T6 113 aa10.38□□□□□ -0.75
MKS1-207ENST00000578789 HBE1P02100 147 aa10.38□□□□□ -0.75
MKS1-207ENST00000578789 OR10J4P0C629 311 aa10.38□□□□□ -0.75
MKS1-207ENST00000578789 ATP6V0CP27449 155 aa10.38□□□□□ -0.75
MKS1-207ENST00000578789 CDKN1BP46527 198 aa10.38□□□□□ -0.75
MKS1-207ENST00000578789 RAB2AP61019 212 aa10.38□□□□□ -0.75
MKS1-207ENST00000578789 UBE2L3P68036 154 aaKnown RBP10.38□□□□□ -0.75
MKS1-207ENST00000578789 EXOC3-AS1Q8N2X6 119 aa10.38□□□□□ -0.75
MKS1-207ENST00000578789 HSD17B11Q8NBQ5 300 aa10.38□□□□□ -0.75
MKS1-207ENST00000578789 PHYHIPLQ96FC7 376 aa10.38□□□□□ -0.75
MKS1-207ENST00000578789 AAMDCQ9H7C9 122 aa10.38□□□□□ -0.75
MKS1-207ENST00000578789 KLK5Q9Y337 293 aaPredicted RBP10.38□□□□□ -0.75
MKS1-207ENST00000578789 C11orf94C9JXX5 98 aa10.37□□□□□ -0.75
MKS1-207ENST00000578789 JTBO76095 146 aa10.37□□□□□ -0.75
MKS1-207ENST00000578789 RRN3P1Q2M238 152 aa10.37□□□□□ -0.75
MKS1-207ENST00000578789 TMEM256Q8N2U0 113 aa10.37□□□□□ -0.75
MKS1-207ENST00000578789 C20orf144Q9BQM9 153 aa10.37□□□□□ -0.75
MKS1-207ENST00000578789 TMEM208Q9BTX3 173 aa10.37□□□□□ -0.75
MKS1-207ENST00000578789 A0A1W2PPV4 95 aa10.36□□□□□ -0.75
MKS1-207ENST00000578789 CT45A10P0DMU9 189 aa10.36□□□□□ -0.75
MKS1-207ENST00000578789 TSPOP30536 169 aa10.36□□□□□ -0.75
MKS1-207ENST00000578789 SERF2P84101 59 aa10.36□□□□□ -0.75
MKS1-207ENST00000578789 ICAM4Q14773 271 aa10.36□□□□□ -0.75
MKS1-207ENST00000578789 RPL7L1Q6DKI1 246 aaKnown RBP10.36□□□□□ -0.75
MKS1-207ENST00000578789 PQLC2Q6ZP29 291 aa10.36□□□□□ -0.75
MKS1-207ENST00000578789 LYPD1Q8N2G4 141 aa10.36□□□□□ -0.75
MKS1-207ENST00000578789 RPP25LQ8N5L8 163 aaKnown RBP10.36□□□□□ -0.75
MKS1-207ENST00000578789 OR10G4Q8NGN3 311 aa10.36□□□□□ -0.75
MKS1-207ENST00000578789 OR10G9Q8NGN4 311 aa10.36□□□□□ -0.75
MKS1-207ENST00000578789 OR10G7Q8NGN6 311 aa10.36□□□□□ -0.75
MKS1-207ENST00000578789 BORCS7-ASMTA0A0B4J1R7 106 aa10.35□□□□□ -0.75
MKS1-207ENST00000578789 TEX48A0A1B0GUV7 120 aa10.35□□□□□ -0.75
MKS1-207ENST00000578789 LOC102723971A0A1B0GUV8 181 aa10.35□□□□□ -0.75
MKS1-207ENST00000578789 ARPC5O15511 151 aa10.35□□□□□ -0.75
MKS1-207ENST00000578789 LEPP41159 167 aa10.35□□□□□ -0.75
MKS1-207ENST00000578789 C12orf74Q32Q52 190 aa10.35□□□□□ -0.75
MKS1-207ENST00000578789 FAM122CQ6P4D5 195 aa10.35□□□□□ -0.75
MKS1-207ENST00000578789 Q6ZTC4 211 aa10.35□□□□□ -0.75
MKS1-207ENST00000578789 SH3BGRL3Q9H299 93 aa10.35□□□□□ -0.75
MKS1-207ENST00000578789 DKK2Q9UBU2 259 aa10.35□□□□□ -0.75
MKS1-207ENST00000578789 DNAH1Q9P2D7 4330 aa10.35□□□□□ -0.75
MKS1-207ENST00000578789 TRAV10A0A0B4J240 114 aa10.34□□□□□ -0.75
MKS1-207ENST00000578789 SMLR1H3BR10 107 aa10.34□□□□□ -0.75
MKS1-207ENST00000578789 TAAR5O14804 337 aa10.34□□□□□ -0.75
MKS1-207ENST00000578789 EIF3GO75821 320 aaKnown RBP eCLIP10.34□□□□□ -0.75
MKS1-207ENST00000578789 MBP02144 154 aa10.34□□□□□ -0.75
MKS1-207ENST00000578789 SPART-AS1P0CW21 52 aa10.34□□□□□ -0.75
MKS1-207ENST00000578789 CDC34P49427 236 aaPredicted RBP10.34□□□□□ -0.75
MKS1-207ENST00000578789 TAS2R60P59551 318 aa10.34□□□□□ -0.75
MKS1-207ENST00000578789 KIR3DS1Q14943 382 aa10.34□□□□□ -0.75
MKS1-207ENST00000578789 GFI1BQ5VTD9 330 aa10.34□□□□□ -0.75
MKS1-207ENST00000578789 C9orf47Q6ZRZ4 202 aa10.34□□□□□ -0.75
MKS1-207ENST00000578789 GNPNAT1Q96EK6 184 aaPredicted RBP10.34□□□□□ -0.75
MKS1-207ENST00000578789 FAM19A4Q96LR4 140 aa10.34□□□□□ -0.75
MKS1-207ENST00000578789 LINC00477Q96M19 166 aa10.34□□□□□ -0.75
MKS1-207ENST00000578789 Q9H3A6 140 aa10.34□□□□□ -0.75
MKS1-207ENST00000578789 ZNF705GA8MUZ8 300 aaPredicted RBP10.33□□□□□ -0.76
MKS1-207ENST00000578789 STAG3L2P0CL84 134 aa10.33□□□□□ -0.76
MKS1-207ENST00000578789 STAG3L3P0CL85 134 aa10.33□□□□□ -0.76
MKS1-207ENST00000578789 EMP1P54849 157 aa10.33□□□□□ -0.76
MKS1-207ENST00000578789 RANP62826 216 aaKnown RBP10.33□□□□□ -0.76
MKS1-207ENST00000578789 ERCC8Q13216 396 aa10.33□□□□□ -0.76
MKS1-207ENST00000578789 ZNF345Q14585 488 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms