RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 ZNF546Q86UE3 836 aa11.73□□□□□ -0.53
CDK5RAP3-206ENST00000578018 C15orf53Q8NAA6 179 aa11.73□□□□□ -0.53
CDK5RAP3-206ENST00000578018 PRB4P10163 310 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 CXCL2P19875 107 aa11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 RHOBP62745 196 aa11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 NHLH2Q02577 135 aa11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 PXDC1Q5TGL8 231 aa11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 Q6ZNX1 250 aa11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 TMEM256Q8N2U0 113 aa11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 THAP6Q8TBB0 222 aa11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 LRRC20Q8TCA0 184 aa11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 CHAC2Q8WUX2 184 aa11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 RPUSD4Q96CM3 377 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 UQCC1Q9NVA1 299 aa11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 MBD2Q9UBB5 411 aa11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 RNF24Q9Y225 148 aa11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 MUC4Q99102 2169 aa11.72□□□□□ -0.53
CDK5RAP3-206ENST00000578018 AGPAT2O15120 278 aa11.71□□□□□ -0.53
CDK5RAP3-206ENST00000578018 DEFB130BP0DP73 79 aa11.71□□□□□ -0.53
CDK5RAP3-206ENST00000578018 DEFB130AP0DP74 79 aa11.71□□□□□ -0.53
CDK5RAP3-206ENST00000578018 LCN15Q6UWW0 184 aa11.71□□□□□ -0.53
CDK5RAP3-206ENST00000578018 LINC00305Q7Z4B0 112 aa11.71□□□□□ -0.53
CDK5RAP3-206ENST00000578018 ZNF331Q9NQX6 463 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP3-206ENST00000578018 WDR83OSQ9Y284 106 aa11.71□□□□□ -0.53
CDK5RAP3-206ENST00000578018 RPL12P30050 165 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-206ENST00000578018 TAS2R60P59551 318 aa11.7□□□□□ -0.54
CDK5RAP3-206ENST00000578018 LINC01587Q99440 93 aa11.7□□□□□ -0.54
CDK5RAP3-206ENST00000578018 MGST2Q99735 147 aa11.7□□□□□ -0.54
CDK5RAP3-206ENST00000578018 SLC50A1Q9BRV3 221 aa11.7□□□□□ -0.54
CDK5RAP3-206ENST00000578018 PPP1R14DQ9NXH3 145 aa11.7□□□□□ -0.54
CDK5RAP3-206ENST00000578018 MED14OSP0DP75 135 aa11.69□□□□□ -0.54
CDK5RAP3-206ENST00000578018 CDKN1BP46527 198 aa11.69□□□□□ -0.54
CDK5RAP3-206ENST00000578018 FAM3BP58499 235 aaPredicted RBP11.69□□□□□ -0.54
CDK5RAP3-206ENST00000578018 RAB31Q13636 194 aa11.69□□□□□ -0.54
CDK5RAP3-206ENST00000578018 MORN5Q5VZ52 161 aa11.69□□□□□ -0.54
CDK5RAP3-206ENST00000578018 OR5C1Q8NGR4 320 aa11.69□□□□□ -0.54
CDK5RAP3-206ENST00000578018 TMEM37Q8WXS4 190 aa11.69□□□□□ -0.54
CDK5RAP3-206ENST00000578018 C16orf74Q96GX8 76 aa11.69□□□□□ -0.54
CDK5RAP3-206ENST00000578018 HSPB11Q9Y547 144 aa11.69□□□□□ -0.54
CDK5RAP3-206ENST00000578018 F5H768 121 aa11.68□□□□□ -0.54
CDK5RAP3-206ENST00000578018 SLC17A3O00476 420 aa11.68□□□□□ -0.54
CDK5RAP3-206ENST00000578018 COX7A2P2O60397 106 aa11.68□□□□□ -0.54
CDK5RAP3-206ENST00000578018 MPDU1O75352 247 aa11.68□□□□□ -0.54
CDK5RAP3-206ENST00000578018 SNRPCP09234 159 aaKnown RBP11.68□□□□□ -0.54
CDK5RAP3-206ENST00000578018 Q5BKY6 102 aa11.68□□□□□ -0.54
CDK5RAP3-206ENST00000578018 SOHLH1Q5JUK2 328 aa11.68□□□□□ -0.54
CDK5RAP3-206ENST00000578018 BPIFA4PQ86YQ2 179 aa11.68□□□□□ -0.54
CDK5RAP3-206ENST00000578018 G3V3Q6 166 aa11.67□□□□□ -0.54
CDK5RAP3-206ENST00000578018 ATP5G1P05496 136 aa11.67□□□□□ -0.54
CDK5RAP3-206ENST00000578018 IGLC2P0DOY2 106 aa11.67□□□□□ -0.54
CDK5RAP3-206ENST00000578018 HTN1P15515 57 aa11.67□□□□□ -0.54
CDK5RAP3-206ENST00000578018 ATP5G3P48201 142 aa11.67□□□□□ -0.54
CDK5RAP3-206ENST00000578018 OPCMLQ14982 345 aa11.67□□□□□ -0.54
CDK5RAP3-206ENST00000578018 C1orf134Q5TEV5 83 aa11.67□□□□□ -0.54
CDK5RAP3-206ENST00000578018 OR2T35Q8NGX2 323 aa11.67□□□□□ -0.54
CDK5RAP3-206ENST00000578018 RNASE8Q8TDE3 154 aaKnown RBP11.67□□□□□ -0.54
CDK5RAP3-206ENST00000578018 AQP10Q96PS8 301 aa11.67□□□□□ -0.54
CDK5RAP3-206ENST00000578018 ATG101Q9BSB4 218 aa11.67□□□□□ -0.54
CDK5RAP3-206ENST00000578018 CBY3A6NI87 242 aa11.66□□□□□ -0.54
CDK5RAP3-206ENST00000578018 PRAC2D3DTV9 90 aa11.66□□□□□ -0.54
CDK5RAP3-206ENST00000578018 H3BTX0 84 aa11.66□□□□□ -0.54
CDK5RAP3-206ENST00000578018 H7BYZ3 331 aa11.66□□□□□ -0.54
CDK5RAP3-206ENST00000578018 CAMLGP49069 296 aa11.66□□□□□ -0.54
CDK5RAP3-206ENST00000578018 KIR3DS1Q14943 382 aa11.66□□□□□ -0.54
CDK5RAP3-206ENST00000578018 C10orf113Q5VZT2 155 aa11.66□□□□□ -0.54
CDK5RAP3-206ENST00000578018 ZNF493Q6ZR52 646 aa11.66□□□□□ -0.54
CDK5RAP3-206ENST00000578018 TMEM263Q8WUH6 116 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-206ENST00000578018 C20orf144Q9BQM9 153 aa11.66□□□□□ -0.54
CDK5RAP3-206ENST00000578018 PARD6GQ9BYG4 376 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-206ENST00000578018 TIMM8BQ9Y5J9 83 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-206ENST00000578018 UBE2L5PA0A1B0GUS4 154 aa11.65□□□□□ -0.54
CDK5RAP3-206ENST00000578018 H3BQ15 152 aa11.65□□□□□ -0.54
CDK5RAP3-206ENST00000578018 NUDT3O95989 172 aa11.65□□□□□ -0.54
CDK5RAP3-206ENST00000578018 RPL29P47914 159 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-206ENST00000578018 GFI1BQ5VTD9 330 aa11.65□□□□□ -0.54
CDK5RAP3-206ENST00000578018 ZNRF2Q8NHG8 242 aa11.65□□□□□ -0.54
CDK5RAP3-206ENST00000578018 ATP5SQ99766 215 aa11.65□□□□□ -0.54
CDK5RAP3-206ENST00000578018 NOP10Q9NPE3 64 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-206ENST00000578018 PXMP4Q9Y6I8 212 aa11.65□□□□□ -0.54
CDK5RAP3-206ENST00000578018 FGF7P21781 194 aa11.64□□□□□ -0.55
CDK5RAP3-206ENST00000578018 CLINT1Q14677 625 aa11.64□□□□□ -0.55
CDK5RAP3-206ENST00000578018 MIC13Q5XKP0 118 aa11.64□□□□□ -0.55
CDK5RAP3-206ENST00000578018 OR10J6PQ8NGY7 276 aa11.64□□□□□ -0.55
CDK5RAP3-206ENST00000578018 RNF141Q8WVD5 230 aa11.64□□□□□ -0.55
CDK5RAP3-206ENST00000578018 SAT2Q96F10 170 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-206ENST00000578018 WDR61Q9GZS3 305 aaKnown RBP11.64□□□□□ -0.55
CDK5RAP3-206ENST00000578018 TNFSF18Q9UNG2 199 aa11.64□□□□□ -0.55
CDK5RAP3-206ENST00000578018 RYR1P21817 5038 aa11.64□□□□□ -0.55
CDK5RAP3-206ENST00000578018 Q6ZRG5 221 aa11.63□□□□□ -0.55
CDK5RAP3-206ENST00000578018 LINC00612Q8N6U2 182 aa11.63□□□□□ -0.55
CDK5RAP3-206ENST00000578018 INO80EQ8NBZ0 244 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-206ENST00000578018 NPCDR1Q9BY65 106 aa11.63□□□□□ -0.55
CDK5RAP3-206ENST00000578018 DNAJC4Q9NNZ3 241 aa11.63□□□□□ -0.55
CDK5RAP3-206ENST00000578018 TRAV5A0A0B4J249 113 aa11.62□□□□□ -0.55
CDK5RAP3-206ENST00000578018 NBDYA0A0U1RRE5 68 aa11.62□□□□□ -0.55
CDK5RAP3-206ENST00000578018 ZNF575Q86XF7 245 aa11.62□□□□□ -0.55
CDK5RAP3-206ENST00000578018 WFDC1Q9HC57 220 aa11.62□□□□□ -0.55
CDK5RAP3-206ENST00000578018 LINC00588Q9Y4M8 146 aa11.62□□□□□ -0.55
CDK5RAP3-206ENST00000578018 RNF222A6NCQ9 220 aa11.61□□□□□ -0.55
CDK5RAP3-206ENST00000578018 NPIPB6E9PJ23 425 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms