RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 PCDH15Q96QU1 1955 aa4.9□□□□□ -1.62
CNOT1-211ENST00000567188 CEACAM4O75871 244 aa4.9□□□□□ -1.63
CNOT1-211ENST00000567188 MYOD1P15172 320 aa4.9□□□□□ -1.63
CNOT1-211ENST00000567188 Q6ZT83 130 aa4.9□□□□□ -1.63
CNOT1-211ENST00000567188 C18orf15Q96N68 181 aa4.9□□□□□ -1.63
CNOT1-211ENST00000567188 CLUHP3Q96NS8 147 aa4.9□□□□□ -1.63
CNOT1-211ENST00000567188 ASCL2Q99929 193 aa4.9□□□□□ -1.63
CNOT1-211ENST00000567188 SPTA1P02549 2419 aa4.9□□□□□ -1.63
CNOT1-211ENST00000567188 NDUFA3O95167 84 aa4.9□□□□□ -1.63
CNOT1-211ENST00000567188 HLA-DRB4P13762 266 aa4.9□□□□□ -1.63
CNOT1-211ENST00000567188 C12orf74Q32Q52 190 aa4.9□□□□□ -1.63
CNOT1-211ENST00000567188 RFESDQ8TAC1 157 aa4.9□□□□□ -1.63
CNOT1-211ENST00000567188 HLA-DRB4X5D2U9 266 aa4.9□□□□□ -1.63
CNOT1-211ENST00000567188 TRAV21A0A0B4J279 112 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 NPIPB11E5RHQ5 1161 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 CRYBA2P53672 197 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 ZC2HC1BQ5TFG8 222 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 TMEM14EPQ6UXP3 125 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 VKORC1Q9BQB6 163 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 DKK4Q9UBT3 224 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 DMDP11532 3685 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 TFF3Q07654 80 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 FAM159AQ6UWV7 190 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 IGFBPL1Q8WX77 278 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 TMEM158Q8WZ71 300 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 LYPD3O95274 346 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 PYYP10082 97 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 B3GALT5-AS1P59052 145 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 C1orf195Q5TG92 126 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 MBNL2Q5VZF2 373 aaKnown RBP4.89□□□□□ -1.63
CNOT1-211ENST00000567188 SUMO4Q6EEV6 95 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 Q6ZS49 121 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 Q6ZUT4 128 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 RNASE7Q9H1E1 156 aaKnown RBP4.89□□□□□ -1.63
CNOT1-211ENST00000567188 TOMM7Q9P0U1 55 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 SELENOKQ9Y6D0 94 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 J3QKU1 62 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 PAQR4Q8N4S7 273 aaPredicted RBP4.89□□□□□ -1.63
CNOT1-211ENST00000567188 IMUPQ9GZP8 106 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 FAM240AA0A1B0GVK7 77 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 PAX1P15863 534 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 RBM3P98179 157 aaKnown RBP4.89□□□□□ -1.63
CNOT1-211ENST00000567188 TMEM42Q69YG0 159 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 C11orf52Q96A22 123 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 SCRT2Q9NQ03 307 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 CALYQ9NYX4 217 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 IQCF6A8MYZ5 107 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 CDPF1Q6NVV7 123 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 C17orf77Q96MU5 243 aa4.89□□□□□ -1.63
CNOT1-211ENST00000567188 A0A0B4J2C4 111 aa4.88□□□□□ -1.63
CNOT1-211ENST00000567188 PRSS29PA6NIE9 313 aa4.88□□□□□ -1.63
CNOT1-211ENST00000567188 SCTP09683 121 aa4.88□□□□□ -1.63
CNOT1-211ENST00000567188 C3orf22Q8N5N4 141 aa4.88□□□□□ -1.63
CNOT1-211ENST00000567188 UBL5Q9BZL1 73 aa4.88□□□□□ -1.63
CNOT1-211ENST00000567188 JPT2Q9H910 190 aa4.88□□□□□ -1.63
CNOT1-211ENST00000567188 PRO1854Q9UHT4 67 aa4.88□□□□□ -1.63
CNOT1-211ENST00000567188 ZNF407Q9C0G0 2248 aa4.88□□□□□ -1.63
CNOT1-211ENST00000567188 WNK2Q9Y3S1 2297 aa4.88□□□□□ -1.63
CNOT1-211ENST00000567188 NPIPB5A8MRT5 1133 aa4.88□□□□□ -1.63
CNOT1-211ENST00000567188 H3BT86 120 aa4.88□□□□□ -1.63
CNOT1-211ENST00000567188 WBP1Q96G27 269 aa4.88□□□□□ -1.63
CNOT1-211ENST00000567188 SUPT4H1P63272 117 aaKnown RBP4.88□□□□□ -1.63
CNOT1-211ENST00000567188 RNF125Q96EQ8 232 aa4.88□□□□□ -1.63
CNOT1-211ENST00000567188 SMIM27A0A1W2PRY6 76 aa4.88□□□□□ -1.63
CNOT1-211ENST00000567188 C5orf63A6NC05 138 aa4.88□□□□□ -1.63
CNOT1-211ENST00000567188 CHKB-CPT1BH3BT56 60 aa4.88□□□□□ -1.63
CNOT1-211ENST00000567188 LYZL4Q96KX0 146 aa4.88□□□□□ -1.63
CNOT1-211ENST00000567188 GFI1Q99684 422 aa4.88□□□□□ -1.63
CNOT1-211ENST00000567188 TRBV6-6A0A0A6YYG2 114 aa4.88□□□□□ -1.63
CNOT1-211ENST00000567188 A4D1N5 150 aa4.88□□□□□ -1.63
CNOT1-211ENST00000567188 RPP25LQ8N5L8 163 aaKnown RBP4.88□□□□□ -1.63
CNOT1-211ENST00000567188 B9A039 149 aa4.87□□□□□ -1.63
CNOT1-211ENST00000567188 NDUFS5O43920 106 aa4.87□□□□□ -1.63
CNOT1-211ENST00000567188 TEX36Q5VZQ5 186 aa4.87□□□□□ -1.63
CNOT1-211ENST00000567188 KLF14Q8TD94 323 aaPredicted RBP4.87□□□□□ -1.63
CNOT1-211ENST00000567188 RNF138Q8WVD3 245 aa4.87□□□□□ -1.63
CNOT1-211ENST00000567188 TMEM141Q96I45 108 aa4.87□□□□□ -1.63
CNOT1-211ENST00000567188 CECR9P0C854 216 aa4.87□□□□□ -1.63
CNOT1-211ENST00000567188 IFI27P40305 119 aaPredicted RBP4.87□□□□□ -1.63
CNOT1-211ENST00000567188 NMSQ5H8A3 153 aa4.87□□□□□ -1.63
CNOT1-211ENST00000567188 MIR17HGQ75NE6 70 aa4.87□□□□□ -1.63
CNOT1-211ENST00000567188 NTN5Q8WTR8 489 aaPredicted RBP4.87□□□□□ -1.63
CNOT1-211ENST00000567188 NDUFA12Q9UI09 145 aa4.87□□□□□ -1.63
CNOT1-211ENST00000567188 NCOR1O75376 2440 aa4.87□□□□□ -1.63
CNOT1-211ENST00000567188 ACP7Q6ZNF0 438 aa4.87□□□□□ -1.63
CNOT1-211ENST00000567188 ZIC4Q8N9L1 334 aa4.87□□□□□ -1.63
CNOT1-211ENST00000567188 NABP1Q96AH0 204 aa4.87□□□□□ -1.63
CNOT1-211ENST00000567188 LIME1Q9H400 295 aa4.87□□□□□ -1.63
CNOT1-211ENST00000567188 VSIRQ9H7M9 311 aa4.87□□□□□ -1.63
CNOT1-211ENST00000567188 RPUSD1Q9UJJ7 312 aaKnown RBP4.87□□□□□ -1.63
CNOT1-211ENST00000567188 IGHV3-72A0A0B4J1Y9 119 aa4.87□□□□□ -1.63
CNOT1-211ENST00000567188 PDE6HQ13956 83 aa4.87□□□□□ -1.63
CNOT1-211ENST00000567188 LCNL1Q6ZST4 164 aa4.87□□□□□ -1.63
CNOT1-211ENST00000567188 IGHV3-21A0A0B4J1V1 117 aa4.87□□□□□ -1.63
CNOT1-211ENST00000567188 NDUFA7O95182 113 aa4.87□□□□□ -1.63
CNOT1-211ENST00000567188 MRPS36P82909 103 aaKnown RBP4.87□□□□□ -1.63
CNOT1-211ENST00000567188 ANXA2RQ3ZCQ2 193 aa4.87□□□□□ -1.63
CNOT1-211ENST00000567188 LINC00643Q86TS7 51 aa4.87□□□□□ -1.63
CNOT1-211ENST00000567188 H0YJW9 148 aa4.87□□□□□ -1.63
CNOT1-211ENST00000567188 ZNF843Q8N446 348 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms