RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 K7EP34 96 aa16.19■□□□□ 0.18
MAP1LC3B-206ENST00000564844 NPYP01303 97 aa16.19■□□□□ 0.18
MAP1LC3B-206ENST00000564844 TMEM186Q96B77 213 aa16.19■□□□□ 0.18
MAP1LC3B-206ENST00000564844 IGKV2D-26A0A0A0MRZ7 120 aa16.19■□□□□ 0.18
MAP1LC3B-206ENST00000564844 G3V4G9 280 aa16.19■□□□□ 0.18
MAP1LC3B-206ENST00000564844 CT45A10P0DMU9 189 aa16.19■□□□□ 0.18
MAP1LC3B-206ENST00000564844 NGBQ9NPG2 151 aa16.19■□□□□ 0.18
MAP1LC3B-206ENST00000564844 FAM215AQ9Y5M1 114 aa16.19■□□□□ 0.18
MAP1LC3B-206ENST00000564844 NPIPB5A8MRT5 1133 aa16.18■□□□□ 0.18
MAP1LC3B-206ENST00000564844 H3BRM9 83 aa16.18■□□□□ 0.18
MAP1LC3B-206ENST00000564844 CRYGCP07315 174 aa16.18■□□□□ 0.18
MAP1LC3B-206ENST00000564844 JKAMPQ9P055 326 aa16.18■□□□□ 0.18
MAP1LC3B-206ENST00000564844 C19orf67A6NJJ6 358 aa16.18■□□□□ 0.18
MAP1LC3B-206ENST00000564844 MRPL51Q4U2R6 128 aaKnown RBP16.18■□□□□ 0.18
MAP1LC3B-206ENST00000564844 IFI27L1Q96BM0 104 aa16.18■□□□□ 0.18
MAP1LC3B-206ENST00000564844 LINC00574Q9H8X3 128 aa16.18■□□□□ 0.18
MAP1LC3B-206ENST00000564844 IGKV1-17P01599 117 aa16.17■□□□□ 0.18
MAP1LC3B-206ENST00000564844 FXYD2P54710 66 aa16.17■□□□□ 0.18
MAP1LC3B-206ENST00000564844 TMEM189A5PLL7 270 aa16.17■□□□□ 0.18
MAP1LC3B-206ENST00000564844 GATA1P15976 413 aaPredicted RBP16.17■□□□□ 0.18
MAP1LC3B-206ENST00000564844 RPS20P60866 119 aaKnown RBP16.17■□□□□ 0.18
MAP1LC3B-206ENST00000564844 BOD1L2Q8IYS8 172 aa16.17■□□□□ 0.18
MAP1LC3B-206ENST00000564844 SIGLEC9Q9Y336 463 aa16.17■□□□□ 0.18
MAP1LC3B-206ENST00000564844 TRBV19A0A075B6N1 114 aa16.17■□□□□ 0.18
MAP1LC3B-206ENST00000564844 TEX48A0A1B0GUV7 120 aa16.17■□□□□ 0.18
MAP1LC3B-206ENST00000564844 LCNL1Q6ZST4 164 aa16.16■□□□□ 0.18
MAP1LC3B-206ENST00000564844 ZNF292O60281 2723 aa16.16■□□□□ 0.18
MAP1LC3B-206ENST00000564844 A0A1W2PPM0 123 aa16.16■□□□□ 0.18
MAP1LC3B-206ENST00000564844 PRSS1P07477 247 aa16.16■□□□□ 0.18
MAP1LC3B-206ENST00000564844 HLA-DMBP28068 263 aa16.16■□□□□ 0.18
MAP1LC3B-206ENST00000564844 APOBEC3AP31941 199 aaPredicted RBP16.16■□□□□ 0.18
MAP1LC3B-206ENST00000564844 SMAGPQ0VAQ4 97 aa16.16■□□□□ 0.18
MAP1LC3B-206ENST00000564844 PPP1R27Q86WC6 154 aa16.16■□□□□ 0.18
MAP1LC3B-206ENST00000564844 ORMDL3Q8N138 153 aa16.16■□□□□ 0.18
MAP1LC3B-206ENST00000564844 GTSCR1Q86UQ5 136 aa16.15■□□□□ 0.18
MAP1LC3B-206ENST00000564844 C17orf100A8MU93 164 aa16.15■□□□□ 0.18
MAP1LC3B-206ENST00000564844 PSG3Q16557 428 aa16.15■□□□□ 0.18
MAP1LC3B-206ENST00000564844 ADAMTSL5Q6ZMM2 481 aa16.15■□□□□ 0.18
MAP1LC3B-206ENST00000564844 NDUFS7O75251 213 aa16.15■□□□□ 0.18
MAP1LC3B-206ENST00000564844 HSD52Q0P140 79 aa16.15■□□□□ 0.18
MAP1LC3B-206ENST00000564844 SAMD5Q5TGI4 173 aa16.15■□□□□ 0.18
MAP1LC3B-206ENST00000564844 TEX36Q5VZQ5 186 aa16.15■□□□□ 0.18
MAP1LC3B-206ENST00000564844 SIGLEC15Q6ZMC9 328 aa16.15■□□□□ 0.18
MAP1LC3B-206ENST00000564844 HBDP02042 147 aa16.14■□□□□ 0.17
MAP1LC3B-206ENST00000564844 LOXP28300 417 aaPredicted RBP16.14■□□□□ 0.17
MAP1LC3B-206ENST00000564844 ADIPOQQ15848 244 aa16.14■□□□□ 0.17
MAP1LC3B-206ENST00000564844 FAM104BQ5XKR9 115 aa16.14■□□□□ 0.17
MAP1LC3B-206ENST00000564844 NPFFR1Q9GZQ6 430 aa16.14■□□□□ 0.17
MAP1LC3B-206ENST00000564844 NHP2Q9NX24 153 aaKnown RBP16.14■□□□□ 0.17
MAP1LC3B-206ENST00000564844 SH2D1AO60880 128 aa16.14■□□□□ 0.17
MAP1LC3B-206ENST00000564844 ZNF883P0CG24 379 aa16.14■□□□□ 0.17
MAP1LC3B-206ENST00000564844 IGHV1-8P0DP01 117 aa16.14■□□□□ 0.17
MAP1LC3B-206ENST00000564844 FABP2P12104 132 aa16.14■□□□□ 0.17
MAP1LC3B-206ENST00000564844 FCER1GP30273 86 aa16.14■□□□□ 0.17
MAP1LC3B-206ENST00000564844 ABHD17AQ96GS6 310 aa16.14■□□□□ 0.17
MAP1LC3B-206ENST00000564844 K7EQM0 130 aa16.13■□□□□ 0.17
MAP1LC3B-206ENST00000564844 SPG11Q96JI7 2443 aa16.13■□□□□ 0.17
MAP1LC3B-206ENST00000564844 PPIAL4CA0A0B4J2A2 164 aa16.13■□□□□ 0.17
MAP1LC3B-206ENST00000564844 INS-IGF2F8WCM5 200 aa16.13■□□□□ 0.17
MAP1LC3B-206ENST00000564844 PPIAL4GP0DN37 164 aa16.13■□□□□ 0.17
MAP1LC3B-206ENST00000564844 SCNM1Q9BWG6 230 aa16.13■□□□□ 0.17
MAP1LC3B-206ENST00000564844 CUL9Q8IWT3 2517 aa16.13■□□□□ 0.17
MAP1LC3B-206ENST00000564844 TEX22C9J3V5 150 aa16.13■□□□□ 0.17
MAP1LC3B-206ENST00000564844 BSPH1Q075Z2 132 aa16.13■□□□□ 0.17
MAP1LC3B-206ENST00000564844 DYNLRB1Q9NP97 96 aa16.13■□□□□ 0.17
MAP1LC3B-206ENST00000564844 CELSR1Q9NYQ6 3014 aa16.12■□□□□ 0.17
MAP1LC3B-206ENST00000564844 TMEM178BH3BS89 294 aa16.12■□□□□ 0.17
MAP1LC3B-206ENST00000564844 M0R296 226 aa16.12■□□□□ 0.17
MAP1LC3B-206ENST00000564844 ORM1P02763 201 aa16.12■□□□□ 0.17
MAP1LC3B-206ENST00000564844 FTH1P19P0C7X4 201 aa16.12■□□□□ 0.17
MAP1LC3B-206ENST00000564844 MC5RP33032 325 aa16.12■□□□□ 0.17
MAP1LC3B-206ENST00000564844 MBD3L4A6NDZ8 208 aaPredicted RBP16.12■□□□□ 0.17
MAP1LC3B-206ENST00000564844 MBD3L3A6NE82 208 aaPredicted RBP16.12■□□□□ 0.17
MAP1LC3B-206ENST00000564844 MBD3L5A6NJ08 208 aaPredicted RBP16.12■□□□□ 0.17
MAP1LC3B-206ENST00000564844 LY6HO94772 140 aa16.12■□□□□ 0.17
MAP1LC3B-206ENST00000564844 LGALS7P47929 136 aa16.12■□□□□ 0.17
MAP1LC3B-206ENST00000564844 AMTNQ6UX39 209 aa16.12■□□□□ 0.17
MAP1LC3B-206ENST00000564844 MBD3L2Q8NHZ7 208 aaPredicted RBP16.12■□□□□ 0.17
MAP1LC3B-206ENST00000564844 EGR2P11161 476 aaPredicted RBP16.11■□□□□ 0.17
MAP1LC3B-206ENST00000564844 LEPP41159 167 aa16.11■□□□□ 0.17
MAP1LC3B-206ENST00000564844 ZNF80P51504 273 aaPredicted RBP16.11■□□□□ 0.17
MAP1LC3B-206ENST00000564844 LGALS9BQ3B8N2 356 aa16.1■□□□□ 0.17
MAP1LC3B-206ENST00000564844 LGALS9CQ6DKI2 356 aa16.1■□□□□ 0.17
MAP1LC3B-206ENST00000564844 RNF125Q96EQ8 232 aa16.1■□□□□ 0.17
MAP1LC3B-206ENST00000564844 IGHV3OR16-13A0A075B7E8 117 aa16.1■□□□□ 0.17
MAP1LC3B-206ENST00000564844 IGHV3-74A0A0B4J1X5 117 aa16.1■□□□□ 0.17
MAP1LC3B-206ENST00000564844 SMIM13P0DJ93 91 aa16.1■□□□□ 0.17
MAP1LC3B-206ENST00000564844 TMEM160Q9NX00 188 aa16.1■□□□□ 0.17
MAP1LC3B-206ENST00000564844 I3L2K1 104 aa16.1■□□□□ 0.17
MAP1LC3B-206ENST00000564844 MUC6Q6W4X9 2439 aa16.1■□□□□ 0.17
MAP1LC3B-206ENST00000564844 IGHV1-3A0A0C4DH29 117 aa16.09■□□□□ 0.17
MAP1LC3B-206ENST00000564844 SH2D6Q7Z4S9 175 aa16.09■□□□□ 0.17
MAP1LC3B-206ENST00000564844 ZNF491Q8N8L2 437 aa16.09■□□□□ 0.17
MAP1LC3B-206ENST00000564844 FOXC2Q99958 501 aa16.09■□□□□ 0.17
MAP1LC3B-206ENST00000564844 VGLL1Q99990 258 aa16.09■□□□□ 0.17
MAP1LC3B-206ENST00000564844 SHANK2-AS3Q9BTD1 123 aa16.09■□□□□ 0.17
MAP1LC3B-206ENST00000564844 BSNQ9UPA5 3926 aa16.09■□□□□ 0.17
MAP1LC3B-206ENST00000564844 SFTA2Q6UW10 78 aa16.08■□□□□ 0.17
MAP1LC3B-206ENST00000564844 NEGR1Q7Z3B1 354 aa16.08■□□□□ 0.17
MAP1LC3B-206ENST00000564844 RPEQ96AT9 228 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms