RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 H3BTX0 84 aa8.31□□□□□ -1.08
SLIRP-205ENST00000556310 BOLA2-SMG1P6H3BVE0 249 aa8.31□□□□□ -1.08
SLIRP-205ENST00000556310 INSP01308 110 aa8.31□□□□□ -1.08
SLIRP-205ENST00000556310 SPINK13Q1W4C9 94 aa8.31□□□□□ -1.08
SLIRP-205ENST00000556310 ASB13Q8WXK3 278 aa8.31□□□□□ -1.08
SLIRP-205ENST00000556310 IGF2BP2-AS1Q96M15 143 aa8.31□□□□□ -1.08
SLIRP-205ENST00000556310 MRPL32Q9BYC8 188 aaKnown RBP8.31□□□□□ -1.08
SLIRP-205ENST00000556310 PARD6GQ9BYG4 376 aaPredicted RBP8.31□□□□□ -1.08
SLIRP-205ENST00000556310 SMIM3Q9BZL3 60 aa8.31□□□□□ -1.08
SLIRP-205ENST00000556310 TRBV19A0A075B6N1 114 aa8.3□□□□□ -1.08
SLIRP-205ENST00000556310 IGHV3OR16-12A0A075B7B8 117 aa8.3□□□□□ -1.08
SLIRP-205ENST00000556310 TMEM189A5PLL7 270 aa8.3□□□□□ -1.08
SLIRP-205ENST00000556310 M0R2Z0 102 aa8.3□□□□□ -1.08
SLIRP-205ENST00000556310 IFNA5P01569 189 aa8.3□□□□□ -1.08
SLIRP-205ENST00000556310 GIPP09681 153 aaPredicted RBP8.3□□□□□ -1.08
SLIRP-205ENST00000556310 HIST1H1EP10412 219 aaKnown RBP8.3□□□□□ -1.08
SLIRP-205ENST00000556310 PDE6HQ13956 83 aa8.3□□□□□ -1.08
SLIRP-205ENST00000556310 C1orf158Q8N1D5 194 aa8.3□□□□□ -1.08
SLIRP-205ENST00000556310 SLC25A2Q9BXI2 301 aa8.3□□□□□ -1.08
SLIRP-205ENST00000556310 ZNF586Q9NXT0 402 aa8.3□□□□□ -1.08
SLIRP-205ENST00000556310 RFNGQ9Y644 331 aa8.3□□□□□ -1.08
SLIRP-205ENST00000556310 HYDINQ4G0P3 5121 aa8.3□□□□□ -1.08
SLIRP-205ENST00000556310 C11orf94C9JXX5 98 aa8.29□□□□□ -1.08
SLIRP-205ENST00000556310 CRXO43186 299 aaPredicted RBP8.29□□□□□ -1.08
SLIRP-205ENST00000556310 HBE1P02100 147 aa8.29□□□□□ -1.08
SLIRP-205ENST00000556310 PYYP10082 97 aa8.29□□□□□ -1.08
SLIRP-205ENST00000556310 RHOBP62745 196 aa8.29□□□□□ -1.08
SLIRP-205ENST00000556310 OXA1LQ15070 435 aa8.29□□□□□ -1.08
SLIRP-205ENST00000556310 MIR17HGQ75NE6 70 aa8.29□□□□□ -1.08
SLIRP-205ENST00000556310 BAP18Q8IXM2 172 aa8.29□□□□□ -1.08
SLIRP-205ENST00000556310 OR10J6PQ8NGY7 276 aa8.29□□□□□ -1.08
SLIRP-205ENST00000556310 SCGB1C1Q8TD33 95 aa8.29□□□□□ -1.08
SLIRP-205ENST00000556310 MRPL53Q96EL3 112 aaKnown RBP8.29□□□□□ -1.08
SLIRP-205ENST00000556310 FAM167A-AS1Q96KT0 104 aa8.29□□□□□ -1.08
SLIRP-205ENST00000556310 AP5S1Q9NUS5 200 aa8.29□□□□□ -1.08
SLIRP-205ENST00000556310 CELA1Q9UNI1 258 aa8.29□□□□□ -1.08
SLIRP-205ENST00000556310 NDUFB4O95168 129 aa8.28□□□□□ -1.08
SLIRP-205ENST00000556310 FFAR4Q5NUL3 377 aa8.28□□□□□ -1.08
SLIRP-205ENST00000556310 Q6ZTC4 211 aa8.28□□□□□ -1.08
SLIRP-205ENST00000556310 LINC00476Q8WZB0 136 aa8.28□□□□□ -1.08
SLIRP-205ENST00000556310 AQP10Q96PS8 301 aa8.28□□□□□ -1.08
SLIRP-205ENST00000556310 TMEM208Q9BTX3 173 aa8.28□□□□□ -1.08
SLIRP-205ENST00000556310 WFDC1Q9HC57 220 aa8.28□□□□□ -1.08
SLIRP-205ENST00000556310 PPP1R14DQ9NXH3 145 aa8.28□□□□□ -1.08
SLIRP-205ENST00000556310 FUT9Q9Y231 359 aa8.28□□□□□ -1.08
SLIRP-205ENST00000556310 PRELID1Q9Y255 219 aa8.28□□□□□ -1.08
SLIRP-205ENST00000556310 TEX48A0A1B0GUV7 120 aa8.27□□□□□ -1.09
SLIRP-205ENST00000556310 LOC102723971A0A1B0GUV8 181 aa8.27□□□□□ -1.09
SLIRP-205ENST00000556310 PRAC2D3DTV9 90 aa8.27□□□□□ -1.09
SLIRP-205ENST00000556310 PRB4P10163 310 aaPredicted RBP8.27□□□□□ -1.09
SLIRP-205ENST00000556310 CDKN1BP46527 198 aa8.27□□□□□ -1.09
SLIRP-205ENST00000556310 ZNF266Q14584 549 aa8.27□□□□□ -1.09
SLIRP-205ENST00000556310 RRN3P1Q2M238 152 aa8.27□□□□□ -1.09
SLIRP-205ENST00000556310 C2CD4CQ8TF44 421 aa8.27□□□□□ -1.09
SLIRP-205ENST00000556310 BLNKQ8WV28 456 aa8.27□□□□□ -1.09
SLIRP-205ENST00000556310 OR51M1Q9H341 326 aa8.27□□□□□ -1.09
SLIRP-205ENST00000556310 TIMM9Q9Y5J7 89 aa8.27□□□□□ -1.09
SLIRP-205ENST00000556310 TRAV12-2A0A075B6T6 113 aa8.26□□□□□ -1.09
SLIRP-205ENST00000556310 TRAV10A0A0B4J240 114 aa8.26□□□□□ -1.09
SLIRP-205ENST00000556310 NPIPB6E9PJ23 425 aa8.26□□□□□ -1.09
SLIRP-205ENST00000556310 M0R3E3 92 aa8.26□□□□□ -1.09
SLIRP-205ENST00000556310 OR7C2O60412 319 aa8.26□□□□□ -1.09
SLIRP-205ENST00000556310 SPART-AS1P0CW21 52 aa8.26□□□□□ -1.09
SLIRP-205ENST00000556310 TSPOP30536 169 aa8.26□□□□□ -1.09
SLIRP-205ENST00000556310 EMP1P54849 157 aa8.26□□□□□ -1.09
SLIRP-205ENST00000556310 C12orf74Q32Q52 190 aa8.26□□□□□ -1.09
SLIRP-205ENST00000556310 TMEM256Q8N2U0 113 aa8.26□□□□□ -1.09
SLIRP-205ENST00000556310 RPP25LQ8N5L8 163 aaKnown RBP8.26□□□□□ -1.09
SLIRP-205ENST00000556310 FXYD5Q96DB9 178 aa8.26□□□□□ -1.09
SLIRP-205ENST00000556310 ODF3Q96PU9 254 aa8.26□□□□□ -1.09
SLIRP-205ENST00000556310 PAXXQ9BUH6 204 aa8.26□□□□□ -1.09
SLIRP-205ENST00000556310 AAMDCQ9H7C9 122 aa8.26□□□□□ -1.09
SLIRP-205ENST00000556310 VPS13DQ5THJ4 4388 aa8.25□□□□□ -1.09
SLIRP-205ENST00000556310 NBEAP1P0C6P0 100 aa8.25□□□□□ -1.09
SLIRP-205ENST00000556310 TCTAP57738 103 aa8.25□□□□□ -1.09
SLIRP-205ENST00000556310 TAS2R45P59539 299 aa8.25□□□□□ -1.09
SLIRP-205ENST00000556310 UBE2L3P68036 154 aaKnown RBP8.25□□□□□ -1.09
SLIRP-205ENST00000556310 ACOT6Q3I5F7 207 aaPredicted RBP8.25□□□□□ -1.09
SLIRP-205ENST00000556310 KHDC3LQ587J8 217 aa8.25□□□□□ -1.09
SLIRP-205ENST00000556310 Q5BKY6 102 aa8.25□□□□□ -1.09
SLIRP-205ENST00000556310 EXOC3-AS1Q8N2X6 119 aa8.25□□□□□ -1.09
SLIRP-205ENST00000556310 OR2T35Q8NGX2 323 aa8.25□□□□□ -1.09
SLIRP-205ENST00000556310 C20orf144Q9BQM9 153 aa8.25□□□□□ -1.09
SLIRP-205ENST00000556310 DKK2Q9UBU2 259 aa8.25□□□□□ -1.09
SLIRP-205ENST00000556310 YTHDF2Q9Y5A9 579 aaKnown RBP8.25□□□□□ -1.09
SLIRP-205ENST00000556310 FXYD6-FXYD2A0A087WZ82 144 aa8.24□□□□□ -1.09
SLIRP-205ENST00000556310 ZNF705GA8MUZ8 300 aaPredicted RBP8.24□□□□□ -1.09
SLIRP-205ENST00000556310 OR10J4P0C629 311 aa8.24□□□□□ -1.09
SLIRP-205ENST00000556310 M6PRP20645 277 aa8.24□□□□□ -1.09
SLIRP-205ENST00000556310 LEPP41159 167 aa8.24□□□□□ -1.09
SLIRP-205ENST00000556310 TAS2R60P59551 318 aa8.24□□□□□ -1.09
SLIRP-205ENST00000556310 ICAM4Q14773 271 aa8.24□□□□□ -1.09
SLIRP-205ENST00000556310 FAM222AQ5U5X8 452 aa8.24□□□□□ -1.09
SLIRP-205ENST00000556310 GFI1BQ5VTD9 330 aa8.24□□□□□ -1.09
SLIRP-205ENST00000556310 ZNF767PQ75MW2 155 aa8.24□□□□□ -1.09
SLIRP-205ENST00000556310 INO80EQ8NBZ0 244 aaPredicted RBP8.24□□□□□ -1.09
SLIRP-205ENST00000556310 ZNF503Q96F45 646 aa8.24□□□□□ -1.09
SLIRP-205ENST00000556310 PHYHIPLQ96FC7 376 aa8.24□□□□□ -1.09
SLIRP-205ENST00000556310 PSMG3Q9BT73 122 aaPredicted RBP8.24□□□□□ -1.09
SLIRP-205ENST00000556310 DEFB131BA0A096LNP1 70 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms