RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 FAM74A7A6NL05 159 aa9.26□□□□□ -0.93
SHMT2-221ENST00000555773 PAGE4O60829 102 aa9.26□□□□□ -0.93
SHMT2-221ENST00000555773 NMBP08949 121 aa9.26□□□□□ -0.93
SHMT2-221ENST00000555773 HLA-DMBP28068 263 aa9.26□□□□□ -0.93
SHMT2-221ENST00000555773 EBLN2Q6P2I7 272 aa9.26□□□□□ -0.93
SHMT2-221ENST00000555773 FOXI2Q6ZQN5 318 aa9.26□□□□□ -0.93
SHMT2-221ENST00000555773 CMTM2Q8TAZ6 248 aa9.26□□□□□ -0.93
SHMT2-221ENST00000555773 TCEAL7Q9BRU2 100 aa9.26□□□□□ -0.93
SHMT2-221ENST00000555773 GNG13Q9P2W3 67 aa9.26□□□□□ -0.93
SHMT2-221ENST00000555773 UBE2G2P60604 165 aa9.25□□□□□ -0.93
SHMT2-221ENST00000555773 CST9LP1Q5W188 147 aa9.25□□□□□ -0.93
SHMT2-221ENST00000555773 APRG1Q8IVJ8 170 aa9.25□□□□□ -0.93
SHMT2-221ENST00000555773 C5orf17Q8NAS9 161 aa9.25□□□□□ -0.93
SHMT2-221ENST00000555773 SAV1Q9H4B6 383 aaPredicted RBP9.25□□□□□ -0.93
SHMT2-221ENST00000555773 EPDR1Q9UM22 224 aa9.25□□□□□ -0.93
SHMT2-221ENST00000555773 YTHDF2Q9Y5A9 579 aaKnown RBP9.25□□□□□ -0.93
SHMT2-221ENST00000555773 A0A0J9YX75 114 aa9.24□□□□□ -0.93
SHMT2-221ENST00000555773 SERTM2A0A1B0GWG4 89 aa9.24□□□□□ -0.93
SHMT2-221ENST00000555773 ZNF705FA8MVS1 300 aaPredicted RBP9.24□□□□□ -0.93
SHMT2-221ENST00000555773 GGTLC3B5MD39 225 aa9.24□□□□□ -0.93
SHMT2-221ENST00000555773 F6UZH7 168 aa9.24□□□□□ -0.93
SHMT2-221ENST00000555773 M0R3E3 92 aa9.24□□□□□ -0.93
SHMT2-221ENST00000555773 RGS13O14921 159 aa9.24□□□□□ -0.93
SHMT2-221ENST00000555773 DUSP14O95147 198 aaKnown RBP9.24□□□□□ -0.93
SHMT2-221ENST00000555773 SLC25A5P05141 298 aaKnown RBP9.24□□□□□ -0.93
SHMT2-221ENST00000555773 CLLU1Q5K131 121 aa9.24□□□□□ -0.93
SHMT2-221ENST00000555773 CCDC28AQ8IWP9 274 aa9.24□□□□□ -0.93
SHMT2-221ENST00000555773 DEFB125Q8N687 156 aa9.24□□□□□ -0.93
SHMT2-221ENST00000555773 OR8A1Q8NGG7 326 aa9.24□□□□□ -0.93
SHMT2-221ENST00000555773 OR10J6PQ8NGY7 276 aa9.24□□□□□ -0.93
SHMT2-221ENST00000555773 HIST1H2BAQ96A08 127 aa9.24□□□□□ -0.93
SHMT2-221ENST00000555773 CLUHP3Q96NS8 147 aa9.24□□□□□ -0.93
SHMT2-221ENST00000555773 VAX2Q9UIW0 290 aa9.24□□□□□ -0.93
SHMT2-221ENST00000555773 RBAKDNA6NC62 111 aa9.23□□□□□ -0.93
SHMT2-221ENST00000555773 RBFOX3A6NFN3 312 aa9.23□□□□□ -0.93
SHMT2-221ENST00000555773 A8MZ25 164 aa9.23□□□□□ -0.93
SHMT2-221ENST00000555773 DIRC3C9JPN6 131 aa9.23□□□□□ -0.93
SHMT2-221ENST00000555773 C11orf94C9JXX5 98 aa9.23□□□□□ -0.93
SHMT2-221ENST00000555773 H3BMM0 161 aa9.23□□□□□ -0.93
SHMT2-221ENST00000555773 BCL2P10415 239 aa9.23□□□□□ -0.93
SHMT2-221ENST00000555773 HLA-DRB4P13762 266 aa9.23□□□□□ -0.93
SHMT2-221ENST00000555773 ACTL10Q5JWF8 245 aa9.23□□□□□ -0.93
SHMT2-221ENST00000555773 STHQ8IWL8 128 aa9.23□□□□□ -0.93
SHMT2-221ENST00000555773 TUBA4BQ9H853 241 aa9.23□□□□□ -0.93
SHMT2-221ENST00000555773 AURKAIP1Q9NWT8 199 aaPredicted RBP9.23□□□□□ -0.93
SHMT2-221ENST00000555773 HLA-DRB4X5D2U9 266 aa9.23□□□□□ -0.93
SHMT2-221ENST00000555773 FBLL1A6NHQ2 334 aaKnown RBP9.22□□□□□ -0.93
SHMT2-221ENST00000555773 KNCNA6PVL3 124 aa9.22□□□□□ -0.93
SHMT2-221ENST00000555773 PRAC2D3DTV9 90 aa9.22□□□□□ -0.93
SHMT2-221ENST00000555773 K7EQM0 130 aa9.22□□□□□ -0.93
SHMT2-221ENST00000555773 TCRAP04437 139 aa9.22□□□□□ -0.93
SHMT2-221ENST00000555773 HAGHQ16775 308 aa9.22□□□□□ -0.93
SHMT2-221ENST00000555773 PCNPQ8WW12 178 aaKnown RBP9.22□□□□□ -0.93
SHMT2-221ENST00000555773 LINC00477Q96M19 166 aa9.22□□□□□ -0.93
SHMT2-221ENST00000555773 FAM210AQ96ND0 272 aa9.22□□□□□ -0.93
SHMT2-221ENST00000555773 CITED4Q96RK1 184 aa9.22□□□□□ -0.93
SHMT2-221ENST00000555773 SRD5A3Q9H8P0 318 aa9.22□□□□□ -0.93
SHMT2-221ENST00000555773 LOC102723971A0A1B0GUV8 181 aa9.21□□□□□ -0.94
SHMT2-221ENST00000555773 F6UB75 175 aa9.21□□□□□ -0.94
SHMT2-221ENST00000555773 PDE6DO43924 150 aa9.21□□□□□ -0.94
SHMT2-221ENST00000555773 NDUFS6O75380 124 aaKnown RBP9.21□□□□□ -0.94
SHMT2-221ENST00000555773 IGHV4-30-4P0DP06 118 aa9.21□□□□□ -0.94
SHMT2-221ENST00000555773 ATP5G3P48201 142 aa9.21□□□□□ -0.94
SHMT2-221ENST00000555773 MEF2BQ02080 365 aaPredicted RBP9.21□□□□□ -0.94
SHMT2-221ENST00000555773 HIST1H1AQ02539 215 aaPredicted RBP9.21□□□□□ -0.94
SHMT2-221ENST00000555773 ZNF124Q15973 351 aa9.21□□□□□ -0.94
SHMT2-221ENST00000555773 ZNF506Q5JVG8 444 aa9.21□□□□□ -0.94
SHMT2-221ENST00000555773 C9orf47Q6ZRZ4 202 aa9.21□□□□□ -0.94
SHMT2-221ENST00000555773 ATG101Q9BSB4 218 aa9.21□□□□□ -0.94
SHMT2-221ENST00000555773 WFDC10AQ9H1F0 79 aa9.21□□□□□ -0.94
SHMT2-221ENST00000555773 PPP1R14DQ9NXH3 145 aa9.21□□□□□ -0.94
SHMT2-221ENST00000555773 A8MTW9 85 aa9.2□□□□□ -0.94
SHMT2-221ENST00000555773 NPIPB6E9PJ23 425 aa9.2□□□□□ -0.94
SHMT2-221ENST00000555773 PEX7O00628 323 aa9.2□□□□□ -0.94
SHMT2-221ENST00000555773 CNN1P51911 297 aaKnown RBP9.2□□□□□ -0.94
SHMT2-221ENST00000555773 DEFB1P60022 68 aa9.2□□□□□ -0.94
SHMT2-221ENST00000555773 NUTF2P61970 127 aaKnown RBP9.2□□□□□ -0.94
SHMT2-221ENST00000555773 TMEM78Q5T7P6 136 aa9.2□□□□□ -0.94
SHMT2-221ENST00000555773 GDF5OSQ5U4N7 250 aa9.2□□□□□ -0.94
SHMT2-221ENST00000555773 GOLT1AQ6ZVE7 132 aa9.2□□□□□ -0.94
SHMT2-221ENST00000555773 TRPT1Q86TN4 253 aaKnown RBP9.2□□□□□ -0.94
SHMT2-221ENST00000555773 CYB561D1Q8N8Q1 229 aa9.2□□□□□ -0.94
SHMT2-221ENST00000555773 OR4B1Q8NGF8 309 aa9.2□□□□□ -0.94
SHMT2-221ENST00000555773 RARRES2Q99969 163 aa9.2□□□□□ -0.94
SHMT2-221ENST00000555773 EIF5A2Q9GZV4 153 aaKnown RBP9.2□□□□□ -0.94
SHMT2-221ENST00000555773 AGPAT4-IT1Q9H0P7 198 aa9.2□□□□□ -0.94
SHMT2-221ENST00000555773 SMDT1Q9H4I9 107 aa9.2□□□□□ -0.94
SHMT2-221ENST00000555773 LOC102724200A0A096LPH7 203 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-221ENST00000555773 KIR2DL5BA0A0G2JN68 375 aa9.19□□□□□ -0.94
SHMT2-221ENST00000555773 KIR2DL5BA0A0G2JPC4 375 aa9.19□□□□□ -0.94
SHMT2-221ENST00000555773 TRBV7-9A0A0J9YWB2 115 aa9.19□□□□□ -0.94
SHMT2-221ENST00000555773 K7EIL1 84 aa9.19□□□□□ -0.94
SHMT2-221ENST00000555773 PRB2P02812 416 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-221ENST00000555773 S100A9P06702 114 aaKnown RBP9.19□□□□□ -0.94
SHMT2-221ENST00000555773 ZNF705DP0CH99 300 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-221ENST00000555773 ZNF705BP0CI00 300 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-221ENST00000555773 GNG5P63218 68 aa9.19□□□□□ -0.94
SHMT2-221ENST00000555773 PEA15Q15121 130 aa9.19□□□□□ -0.94
SHMT2-221ENST00000555773 MORN3Q6PF18 240 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-221ENST00000555773 LINC00322Q6ZN03 302 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms