RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 PARD6GQ9BYG4 376 aaPredicted RBP13.45□□□□□ -0.26
HDAC4-217ENST00000553145 LOC102723971A0A1B0GUV8 181 aa13.44□□□□□ -0.26
HDAC4-217ENST00000553145 TMEM189A5PLL7 270 aa13.44□□□□□ -0.26
HDAC4-217ENST00000553145 C11orf94C9JXX5 98 aa13.44□□□□□ -0.26
HDAC4-217ENST00000553145 LY6G6CO95867 125 aa13.44□□□□□ -0.26
HDAC4-217ENST00000553145 C2CD4CQ8TF44 421 aa13.44□□□□□ -0.26
HDAC4-217ENST00000553145 TMEM208Q9BTX3 173 aa13.44□□□□□ -0.26
HDAC4-217ENST00000553145 ZNF705GA8MUZ8 300 aaPredicted RBP13.43□□□□□ -0.26
HDAC4-217ENST00000553145 M0R3E3 92 aa13.43□□□□□ -0.26
HDAC4-217ENST00000553145 IFNA5P01569 189 aa13.43□□□□□ -0.26
HDAC4-217ENST00000553145 KIR3DS1Q14943 382 aa13.43□□□□□ -0.26
HDAC4-217ENST00000553145 RRN3P1Q2M238 152 aa13.43□□□□□ -0.26
HDAC4-217ENST00000553145 Q5BKY6 102 aa13.43□□□□□ -0.26
HDAC4-217ENST00000553145 BLNKQ8WV28 456 aa13.43□□□□□ -0.26
HDAC4-217ENST00000553145 MRPL32Q9BYC8 188 aaKnown RBP13.43□□□□□ -0.26
HDAC4-217ENST00000553145 PPP1R14DQ9NXH3 145 aa13.43□□□□□ -0.26
HDAC4-217ENST00000553145 FUT9Q9Y231 359 aa13.43□□□□□ -0.26
HDAC4-217ENST00000553145 TRAV10A0A0B4J240 114 aa13.42□□□□□ -0.26
HDAC4-217ENST00000553145 RGS21Q2M5E4 152 aa13.42□□□□□ -0.26
HDAC4-217ENST00000553145 FFAR4Q5NUL3 377 aa13.42□□□□□ -0.26
HDAC4-217ENST00000553145 FAM222AQ5U5X8 452 aa13.42□□□□□ -0.26
HDAC4-217ENST00000553145 RPP25LQ8N5L8 163 aaKnown RBP13.42□□□□□ -0.26
HDAC4-217ENST00000553145 OR10J6PQ8NGY7 276 aa13.42□□□□□ -0.26
HDAC4-217ENST00000553145 SCGB1C1Q8TD33 95 aa13.42□□□□□ -0.26
HDAC4-217ENST00000553145 DKK2Q9UBU2 259 aa13.42□□□□□ -0.26
HDAC4-217ENST00000553145 YTHDF2Q9Y5A9 579 aaKnown RBP13.42□□□□□ -0.26
HDAC4-217ENST00000553145 IGLL5B9A064 214 aa13.41□□□□□ -0.26
HDAC4-217ENST00000553145 NPIPB6E9PJ23 425 aa13.41□□□□□ -0.26
HDAC4-217ENST00000553145 SPART-AS1P0CW21 52 aa13.41□□□□□ -0.26
HDAC4-217ENST00000553145 CDKN1BP46527 198 aa13.41□□□□□ -0.26
HDAC4-217ENST00000553145 PDE6HQ13956 83 aa13.41□□□□□ -0.26
HDAC4-217ENST00000553145 EXOC3-AS1Q8N2X6 119 aa13.41□□□□□ -0.26
HDAC4-217ENST00000553145 MRPL53Q96EL3 112 aaKnown RBP13.41□□□□□ -0.26
HDAC4-217ENST00000553145 OR51M1Q9H341 326 aa13.41□□□□□ -0.26
HDAC4-217ENST00000553145 PLA2G2EQ9NZK7 142 aa13.41□□□□□ -0.26
HDAC4-217ENST00000553145 TIMM9Q9Y5J7 89 aa13.41□□□□□ -0.26
HDAC4-217ENST00000553145 GIPP09681 153 aaPredicted RBP13.4□□□□□ -0.26
HDAC4-217ENST00000553145 OR10J4P0C629 311 aa13.4□□□□□ -0.26
HDAC4-217ENST00000553145 OXA1LQ15070 435 aa13.4□□□□□ -0.26
HDAC4-217ENST00000553145 FXYD5Q96DB9 178 aa13.4□□□□□ -0.26
HDAC4-217ENST00000553145 ZNF503Q96F45 646 aa13.4□□□□□ -0.26
HDAC4-217ENST00000553145 PAXXQ9BUH6 204 aa13.4□□□□□ -0.26
HDAC4-217ENST00000553145 APLNQ9ULZ1 77 aa13.4□□□□□ -0.26
HDAC4-217ENST00000553145 DEFB131BA0A096LNP1 70 aa13.39□□□□□ -0.27
HDAC4-217ENST00000553145 EIF3GO75821 320 aaKnown RBP eCLIP13.39□□□□□ -0.27
HDAC4-217ENST00000553145 NBEAP1P0C6P0 100 aa13.39□□□□□ -0.27
HDAC4-217ENST00000553145 CT45A10P0DMU9 189 aa13.39□□□□□ -0.27
HDAC4-217ENST00000553145 AZU1P20160 251 aa13.39□□□□□ -0.27
HDAC4-217ENST00000553145 PHYHIPLQ96FC7 376 aa13.39□□□□□ -0.27
HDAC4-217ENST00000553145 AQP10Q96PS8 301 aa13.39□□□□□ -0.27
HDAC4-217ENST00000553145 PLAC8L1A1L4L8 177 aa13.38□□□□□ -0.27
HDAC4-217ENST00000553145 ERCC8Q13216 396 aa13.38□□□□□ -0.27
HDAC4-217ENST00000553145 ICAM4Q14773 271 aa13.38□□□□□ -0.27
HDAC4-217ENST00000553145 GFI1BQ5VTD9 330 aa13.38□□□□□ -0.27
HDAC4-217ENST00000553145 RNF141Q8WVD5 230 aa13.38□□□□□ -0.27
HDAC4-217ENST00000553145 LINC01587Q99440 93 aa13.38□□□□□ -0.27
HDAC4-217ENST00000553145 PRELID1Q9Y255 219 aa13.38□□□□□ -0.27
HDAC4-217ENST00000553145 IGHV4-4A0A075B6R2 117 aa13.37□□□□□ -0.27
HDAC4-217ENST00000553145 J3KRW8 73 aa13.37□□□□□ -0.27
HDAC4-217ENST00000553145 OR7C2O60412 319 aa13.37□□□□□ -0.27
HDAC4-217ENST00000553145 FAM122CQ6P4D5 195 aa13.37□□□□□ -0.27
HDAC4-217ENST00000553145 TMEM256Q8N2U0 113 aa13.37□□□□□ -0.27
HDAC4-217ENST00000553145 ODF3Q96PU9 254 aa13.37□□□□□ -0.27
HDAC4-217ENST00000553145 NIPSNAP3BQ9BS92 247 aa13.37□□□□□ -0.27
HDAC4-217ENST00000553145 AAMDCQ9H7C9 122 aa13.37□□□□□ -0.27
HDAC4-217ENST00000553145 TEX48A0A1B0GUV7 120 aa13.36□□□□□ -0.27
HDAC4-217ENST00000553145 TSPOP30536 169 aa13.36□□□□□ -0.27
HDAC4-217ENST00000553145 TCTAP57738 103 aa13.36□□□□□ -0.27
HDAC4-217ENST00000553145 RAB2AP61019 212 aa13.36□□□□□ -0.27
HDAC4-217ENST00000553145 LGALS9CQ6DKI2 356 aa13.36□□□□□ -0.27
HDAC4-217ENST00000553145 ASB13Q8WXK3 278 aa13.36□□□□□ -0.27
HDAC4-217ENST00000553145 IGKV2-40A0A087WW87 121 aaPredicted RBP13.35□□□□□ -0.27
HDAC4-217ENST00000553145 RNF222A6NCQ9 220 aa13.35□□□□□ -0.27
HDAC4-217ENST00000553145 G3V3Q6 166 aa13.35□□□□□ -0.27
HDAC4-217ENST00000553145 IGKV2D-40P01614 121 aaPredicted RBP13.35□□□□□ -0.27
HDAC4-217ENST00000553145 LEPP41159 167 aa13.35□□□□□ -0.27
HDAC4-217ENST00000553145 TAS2R60P59551 318 aa13.35□□□□□ -0.27
HDAC4-217ENST00000553145 UBE2L3P68036 154 aaKnown RBP13.35□□□□□ -0.27
HDAC4-217ENST00000553145 HSD17B11Q8NBQ5 300 aa13.35□□□□□ -0.27
HDAC4-217ENST00000553145 AGPAT4-IT1Q9H0P7 198 aa13.35□□□□□ -0.27
HDAC4-217ENST00000553145 HTN1P15515 57 aa13.34□□□□□ -0.27
HDAC4-217ENST00000553145 M6PRP20645 277 aa13.34□□□□□ -0.27
HDAC4-217ENST00000553145 ZNF266Q14584 549 aa13.34□□□□□ -0.27
HDAC4-217ENST00000553145 ACOT6Q3I5F7 207 aaPredicted RBP13.34□□□□□ -0.27
HDAC4-217ENST00000553145 KHDC3LQ587J8 217 aa13.34□□□□□ -0.27
HDAC4-217ENST00000553145 FAM19A4Q96LR4 140 aa13.34□□□□□ -0.27
HDAC4-217ENST00000553145 C20orf144Q9BQM9 153 aa13.34□□□□□ -0.27
HDAC4-217ENST00000553145 VPS13DQ5THJ4 4388 aa13.34□□□□□ -0.27
HDAC4-217ENST00000553145 FXYD6-FXYD2A0A087WZ82 144 aa13.33□□□□□ -0.28
HDAC4-217ENST00000553145 H7BYZ3 331 aa13.33□□□□□ -0.28
HDAC4-217ENST00000553145 TAS2R45P59539 299 aa13.33□□□□□ -0.28
HDAC4-217ENST00000553145 DAD1P61803 113 aa13.33□□□□□ -0.28
HDAC4-217ENST00000553145 OR2T35Q8NGX2 323 aa13.33□□□□□ -0.28
HDAC4-217ENST00000553145 VGLL1Q99990 258 aa13.33□□□□□ -0.28
HDAC4-217ENST00000553145 TNFSF18Q9UNG2 199 aa13.33□□□□□ -0.28
HDAC4-217ENST00000553145 TRAV12-3A0A0B4J271 114 aa13.32□□□□□ -0.28
HDAC4-217ENST00000553145 LYRM9A8MSI8 78 aa13.32□□□□□ -0.28
HDAC4-217ENST00000553145 ATP6V0CP27449 155 aa13.32□□□□□ -0.28
HDAC4-217ENST00000553145 RANP62826 216 aaKnown RBP13.32□□□□□ -0.28
HDAC4-217ENST00000553145 C9orf47Q6ZRZ4 202 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms