RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 INMT-MINDY4F8WBC2 141 aa13.21□□□□□ -0.29
CHMP1A-203ENST00000547614 H3BTX0 84 aa13.21□□□□□ -0.29
CHMP1A-203ENST00000547614 HTN3P15516 51 aa13.21□□□□□ -0.29
CHMP1A-203ENST00000547614 AZU1P20160 251 aa13.21□□□□□ -0.29
CHMP1A-203ENST00000547614 NHLH2Q02577 135 aa13.21□□□□□ -0.29
CHMP1A-203ENST00000547614 MARVELD1Q9BSK0 173 aa13.21□□□□□ -0.29
CHMP1A-203ENST00000547614 TMEM14CQ9P0S9 112 aa13.21□□□□□ -0.29
CHMP1A-203ENST00000547614 PLAC8L1A1L4L8 177 aa13.2□□□□□ -0.3
CHMP1A-203ENST00000547614 PRAC2D3DTV9 90 aa13.2□□□□□ -0.3
CHMP1A-203ENST00000547614 H7BYZ3 331 aa13.2□□□□□ -0.3
CHMP1A-203ENST00000547614 SIX6O95475 246 aa13.2□□□□□ -0.3
CHMP1A-203ENST00000547614 ZNF493Q6ZR52 646 aa13.2□□□□□ -0.3
CHMP1A-203ENST00000547614 NPCDR1Q9BY65 106 aa13.2□□□□□ -0.3
CHMP1A-203ENST00000547614 ZNF586Q9NXT0 402 aa13.2□□□□□ -0.3
CHMP1A-203ENST00000547614 PRB4P10163 310 aaPredicted RBP13.19□□□□□ -0.3
CHMP1A-203ENST00000547614 OR5C1Q8NGR4 320 aa13.19□□□□□ -0.3
CHMP1A-203ENST00000547614 C16orf74Q96GX8 76 aa13.19□□□□□ -0.3
CHMP1A-203ENST00000547614 ODF3Q96PU9 254 aa13.19□□□□□ -0.3
CHMP1A-203ENST00000547614 TRBV19A0A075B6N1 114 aa13.18□□□□□ -0.3
CHMP1A-203ENST00000547614 HIST1H1EP10412 219 aaKnown RBP13.18□□□□□ -0.3
CHMP1A-203ENST00000547614 PDE6HQ13956 83 aa13.18□□□□□ -0.3
CHMP1A-203ENST00000547614 RNF212Q495C1 297 aa13.18□□□□□ -0.3
CHMP1A-203ENST00000547614 MRPL53Q96EL3 112 aaKnown RBP13.18□□□□□ -0.3
CHMP1A-203ENST00000547614 OR5AC2Q9NZP5 309 aa13.18□□□□□ -0.3
CHMP1A-203ENST00000547614 TIMM8BQ9Y5J9 83 aaPredicted RBP13.18□□□□□ -0.3
CHMP1A-203ENST00000547614 NPIPB6E9PJ23 425 aa13.17□□□□□ -0.3
CHMP1A-203ENST00000547614 H0YIZ8 118 aa13.17□□□□□ -0.3
CHMP1A-203ENST00000547614 DEFB130BP0DP73 79 aa13.17□□□□□ -0.3
CHMP1A-203ENST00000547614 DEFB130AP0DP74 79 aa13.17□□□□□ -0.3
CHMP1A-203ENST00000547614 HTN1P15515 57 aa13.17□□□□□ -0.3
CHMP1A-203ENST00000547614 DEFA1P59665 94 aa13.17□□□□□ -0.3
CHMP1A-203ENST00000547614 DEFA3P59666 94 aa13.17□□□□□ -0.3
CHMP1A-203ENST00000547614 LRRC37A5PQ49AS3 106 aa13.17□□□□□ -0.3
CHMP1A-203ENST00000547614 TMEM88Q6PEY1 159 aa13.17□□□□□ -0.3
CHMP1A-203ENST00000547614 C15orf53Q8NAA6 179 aa13.17□□□□□ -0.3
CHMP1A-203ENST00000547614 TMEM263Q8WUH6 116 aaKnown RBP13.17□□□□□ -0.3
CHMP1A-203ENST00000547614 PRELID1Q9Y255 219 aa13.17□□□□□ -0.3
CHMP1A-203ENST00000547614 CBY3A6NI87 242 aa13.16□□□□□ -0.3
CHMP1A-203ENST00000547614 CT45A10P0DMU9 189 aa13.16□□□□□ -0.3
CHMP1A-203ENST00000547614 H2BFSP57053 126 aa13.16□□□□□ -0.3
CHMP1A-203ENST00000547614 KIR3DS1Q14943 382 aa13.16□□□□□ -0.3
CHMP1A-203ENST00000547614 GFI1BQ5VTD9 330 aa13.16□□□□□ -0.3
CHMP1A-203ENST00000547614 LINC00336Q6ZUF6 198 aa13.16□□□□□ -0.3
CHMP1A-203ENST00000547614 THAP6Q8TBB0 222 aa13.16□□□□□ -0.3
CHMP1A-203ENST00000547614 RNASE8Q8TDE3 154 aaKnown RBP13.16□□□□□ -0.3
CHMP1A-203ENST00000547614 KCNIP2Q9NS61 270 aa13.16□□□□□ -0.3
CHMP1A-203ENST00000547614 DNAH10Q8IVF4 4471 aa13.15□□□□□ -0.3
CHMP1A-203ENST00000547614 NDUFB4O95168 129 aa13.15□□□□□ -0.3
CHMP1A-203ENST00000547614 ATP5G1P05496 136 aa13.15□□□□□ -0.3
CHMP1A-203ENST00000547614 LEPP41159 167 aa13.15□□□□□ -0.3
CHMP1A-203ENST00000547614 ATP5G3P48201 142 aa13.15□□□□□ -0.3
CHMP1A-203ENST00000547614 FCN2Q15485 313 aa13.15□□□□□ -0.3
CHMP1A-203ENST00000547614 LGALS9BQ3B8N2 356 aa13.15□□□□□ -0.3
CHMP1A-203ENST00000547614 GCSAMLQ5JQS6 135 aa13.15□□□□□ -0.3
CHMP1A-203ENST00000547614 UBE2DNLQ8IWF7 75 aa13.15□□□□□ -0.3
CHMP1A-203ENST00000547614 PPP1R1CQ8WVI7 109 aa13.15□□□□□ -0.3
CHMP1A-203ENST00000547614 PARD6GQ9BYG4 376 aaPredicted RBP13.15□□□□□ -0.3
CHMP1A-203ENST00000547614 TIMM9Q9Y5J7 89 aa13.15□□□□□ -0.3
CHMP1A-203ENST00000547614 DNAH6Q9C0G6 4158 aa13.14□□□□□ -0.31
CHMP1A-203ENST00000547614 CLINT1Q14677 625 aa13.14□□□□□ -0.31
CHMP1A-203ENST00000547614 CCDC28AQ8IWP9 274 aa13.14□□□□□ -0.31
CHMP1A-203ENST00000547614 WDR61Q9GZS3 305 aaKnown RBP13.14□□□□□ -0.31
CHMP1A-203ENST00000547614 BATF3Q9NR55 127 aa13.14□□□□□ -0.31
CHMP1A-203ENST00000547614 M0R3E3 92 aa13.13□□□□□ -0.31
CHMP1A-203ENST00000547614 SSNA1O43805 119 aa13.13□□□□□ -0.31
CHMP1A-203ENST00000547614 PYYP10082 97 aa13.13□□□□□ -0.31
CHMP1A-203ENST00000547614 FAM167A-AS1Q96KT0 104 aa13.13□□□□□ -0.31
CHMP1A-203ENST00000547614 LINC00477Q96M19 166 aa13.13□□□□□ -0.31
CHMP1A-203ENST00000547614 SLC25A2Q9BXI2 301 aa13.13□□□□□ -0.31
CHMP1A-203ENST00000547614 NOP10Q9NPE3 64 aaKnown RBP13.13□□□□□ -0.31
CHMP1A-203ENST00000547614 C17orf112F2Z3M2 114 aa13.12□□□□□ -0.31
CHMP1A-203ENST00000547614 F5H768 121 aa13.12□□□□□ -0.31
CHMP1A-203ENST00000547614 MPC2O95563 127 aa13.12□□□□□ -0.31
CHMP1A-203ENST00000547614 PET100P0DJ07 73 aa13.12□□□□□ -0.31
CHMP1A-203ENST00000547614 FAM3BP58499 235 aaPredicted RBP13.12□□□□□ -0.31
CHMP1A-203ENST00000547614 PYGO2Q9BRQ0 406 aa13.12□□□□□ -0.31
CHMP1A-203ENST00000547614 MRPL32Q9BYC8 188 aaKnown RBP13.12□□□□□ -0.31
CHMP1A-203ENST00000547614 AAMDCQ9H7C9 122 aa13.12□□□□□ -0.31
CHMP1A-203ENST00000547614 TRAV12-3A0A0B4J271 114 aa13.11□□□□□ -0.31
CHMP1A-203ENST00000547614 SLC25A5P05141 298 aaKnown RBP13.11□□□□□ -0.31
CHMP1A-203ENST00000547614 NBEAP1P0C6P0 100 aa13.11□□□□□ -0.31
CHMP1A-203ENST00000547614 MIR17HGQ75NE6 70 aa13.11□□□□□ -0.31
CHMP1A-203ENST00000547614 BLNKQ8WV28 456 aa13.11□□□□□ -0.31
CHMP1A-203ENST00000547614 OR51M1Q9H341 326 aa13.11□□□□□ -0.31
CHMP1A-203ENST00000547614 M0R2N4 97 aa13.1□□□□□ -0.31
CHMP1A-203ENST00000547614 C9orf47Q6ZRZ4 202 aa13.1□□□□□ -0.31
CHMP1A-203ENST00000547614 EXOC3-AS1Q8N2X6 119 aa13.1□□□□□ -0.31
CHMP1A-203ENST00000547614 LINC00612Q8N6U2 182 aa13.1□□□□□ -0.31
CHMP1A-203ENST00000547614 FAM19A4Q96LR4 140 aa13.1□□□□□ -0.31
CHMP1A-203ENST00000547614 ATP5SQ99766 215 aa13.1□□□□□ -0.31
CHMP1A-203ENST00000547614 AGPAT4-IT1Q9H0P7 198 aa13.1□□□□□ -0.31
CHMP1A-203ENST00000547614 HSPB11Q9Y547 144 aa13.1□□□□□ -0.31
CHMP1A-203ENST00000547614 SNURFLB1AK76 121 aa13.09□□□□□ -0.31
CHMP1A-203ENST00000547614 KLLNB2CW77 178 aa13.09□□□□□ -0.31
CHMP1A-203ENST00000547614 J3KRW8 73 aa13.09□□□□□ -0.31
CHMP1A-203ENST00000547614 NMBP08949 121 aa13.09□□□□□ -0.31
CHMP1A-203ENST00000547614 ERCC8Q13216 396 aa13.09□□□□□ -0.31
CHMP1A-203ENST00000547614 ICAM4Q14773 271 aa13.09□□□□□ -0.31
CHMP1A-203ENST00000547614 Q6ZR54 194 aa13.09□□□□□ -0.31
CHMP1A-203ENST00000547614 FUT9Q9Y231 359 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms