RNA–Protein interactions for RNA: ENST00000540209.5

RAP1B-221, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-221ENST00000540209 SLC25A31Q9H0C2 315 aa13.77□□□□□ -0.21
RAP1B-221ENST00000540209 PPP1R14DQ9NXH3 145 aa13.77□□□□□ -0.21
RAP1B-221ENST00000540209 ZNF586Q9NXT0 402 aa13.77□□□□□ -0.21
RAP1B-221ENST00000540209 PRAC2D3DTV9 90 aa13.76□□□□□ -0.21
RAP1B-221ENST00000540209 ZNF253O75346 499 aa13.76□□□□□ -0.21
RAP1B-221ENST00000540209 DEFA1P59665 94 aa13.76□□□□□ -0.21
RAP1B-221ENST00000540209 DEFA3P59666 94 aa13.76□□□□□ -0.21
RAP1B-221ENST00000540209 THAP6Q8TBB0 222 aa13.76□□□□□ -0.21
RAP1B-221ENST00000540209 FAM210BQ96KR6 192 aa13.76□□□□□ -0.21
RAP1B-221ENST00000540209 BATF3Q9NR55 127 aa13.76□□□□□ -0.21
RAP1B-221ENST00000540209 HECTD4Q9Y4D8 3996 aa13.75□□□□□ -0.21
RAP1B-221ENST00000540209 PLAC8L1A1L4L8 177 aa13.75□□□□□ -0.21
RAP1B-221ENST00000540209 AZU1P20160 251 aa13.75□□□□□ -0.21
RAP1B-221ENST00000540209 TMEM14CQ9P0S9 112 aa13.75□□□□□ -0.21
RAP1B-221ENST00000540209 DNAH2Q9P225 4427 aa13.74□□□□□ -0.21
RAP1B-221ENST00000540209 TRBV19A0A075B6N1 114 aa13.74□□□□□ -0.21
RAP1B-221ENST00000540209 LYRM9A8MSI8 78 aa13.74□□□□□ -0.21
RAP1B-221ENST00000540209 P0DMU3 169 aa13.74□□□□□ -0.21
RAP1B-221ENST00000540209 FAM231AP0DMU4 169 aa13.74□□□□□ -0.21
RAP1B-221ENST00000540209 FAM231CP0DMU5 169 aa13.74□□□□□ -0.21
RAP1B-221ENST00000540209 DAD1P61803 113 aa13.74□□□□□ -0.21
RAP1B-221ENST00000540209 GCSAMLQ5JQS6 135 aa13.74□□□□□ -0.21
RAP1B-221ENST00000540209 OR10J6PQ8NGY7 276 aa13.74□□□□□ -0.21
RAP1B-221ENST00000540209 PPP1R1CQ8WVI7 109 aa13.74□□□□□ -0.21
RAP1B-221ENST00000540209 LINC01587Q99440 93 aa13.74□□□□□ -0.21
RAP1B-221ENST00000540209 TAS2R60P59551 318 aa13.73□□□□□ -0.21
RAP1B-221ENST00000540209 KIR3DS1Q14943 382 aa13.73□□□□□ -0.21
RAP1B-221ENST00000540209 PARD6GQ9BYG4 376 aaPredicted RBP13.73□□□□□ -0.21
RAP1B-221ENST00000540209 NPIPB6E9PJ23 425 aa13.72□□□□□ -0.21
RAP1B-221ENST00000540209 NDUFB4O95168 129 aa13.72□□□□□ -0.21
RAP1B-221ENST00000540209 HTN3P15516 51 aa13.72□□□□□ -0.21
RAP1B-221ENST00000540209 CLINT1Q14677 625 aa13.72□□□□□ -0.21
RAP1B-221ENST00000540209 MRPL53Q96EL3 112 aaKnown RBP13.72□□□□□ -0.21
RAP1B-221ENST00000540209 C20orf144Q9BQM9 153 aa13.72□□□□□ -0.21
RAP1B-221ENST00000540209 WDR61Q9GZS3 305 aaKnown RBP13.72□□□□□ -0.21
RAP1B-221ENST00000540209 SSNA1O43805 119 aa13.71□□□□□ -0.21
RAP1B-221ENST00000540209 MPC2O95563 127 aa13.71□□□□□ -0.21
RAP1B-221ENST00000540209 PYYP10082 97 aa13.71□□□□□ -0.21
RAP1B-221ENST00000540209 HIST1H1EP10412 219 aaKnown RBP13.71□□□□□ -0.21
RAP1B-221ENST00000540209 PDE6HQ13956 83 aa13.71□□□□□ -0.21
RAP1B-221ENST00000540209 GFI1BQ5VTD9 330 aa13.71□□□□□ -0.21
RAP1B-221ENST00000540209 POM121L12Q8N7R1 296 aa13.71□□□□□ -0.21
RAP1B-221ENST00000540209 C16orf74Q96GX8 76 aa13.71□□□□□ -0.21
RAP1B-221ENST00000540209 ODF3Q96PU9 254 aa13.71□□□□□ -0.21
RAP1B-221ENST00000540209 SLC25A2Q9BXI2 301 aa13.71□□□□□ -0.21
RAP1B-221ENST00000540209 H7BYZ3 331 aa13.7□□□□□ -0.22
RAP1B-221ENST00000540209 M0R3E3 92 aa13.7□□□□□ -0.22
RAP1B-221ENST00000540209 CT45A10P0DMU9 189 aa13.7□□□□□ -0.22
RAP1B-221ENST00000540209 RNASE8Q8TDE3 154 aaKnown RBP13.7□□□□□ -0.22
RAP1B-221ENST00000540209 FAM167A-AS1Q96KT0 104 aa13.7□□□□□ -0.22
RAP1B-221ENST00000540209 KCNIP2Q9NS61 270 aa13.7□□□□□ -0.22
RAP1B-221ENST00000540209 HERC2O95714 4834 aa13.7□□□□□ -0.22
RAP1B-221ENST00000540209 PET100P0DJ07 73 aa13.69□□□□□ -0.22
RAP1B-221ENST00000540209 HTN1P15515 57 aa13.69□□□□□ -0.22
RAP1B-221ENST00000540209 ZNF493Q6ZR52 646 aa13.69□□□□□ -0.22
RAP1B-221ENST00000540209 TMEM263Q8WUH6 116 aaKnown RBP13.69□□□□□ -0.22
RAP1B-221ENST00000540209 ATP5SQ99766 215 aa13.69□□□□□ -0.22
RAP1B-221ENST00000540209 FAT2Q9NYQ8 4349 aa13.68□□□□□ -0.22
RAP1B-221ENST00000540209 DEFB130BP0DP73 79 aa13.68□□□□□ -0.22
RAP1B-221ENST00000540209 DEFB130AP0DP74 79 aa13.68□□□□□ -0.22
RAP1B-221ENST00000540209 FCN2Q15485 313 aa13.68□□□□□ -0.22
RAP1B-221ENST00000540209 TMEM88Q6PEY1 159 aa13.68□□□□□ -0.22
RAP1B-221ENST00000540209 MIR17HGQ75NE6 70 aa13.68□□□□□ -0.22
RAP1B-221ENST00000540209 PRELID1Q9Y255 219 aa13.68□□□□□ -0.22
RAP1B-221ENST00000540209 HSPB11Q9Y547 144 aa13.68□□□□□ -0.22
RAP1B-221ENST00000540209 TIMM9Q9Y5J7 89 aa13.68□□□□□ -0.22
RAP1B-221ENST00000540209 LEPP41159 167 aa13.67□□□□□ -0.22
RAP1B-221ENST00000540209 BLNKQ8WV28 456 aa13.67□□□□□ -0.22
RAP1B-221ENST00000540209 MRPL32Q9BYC8 188 aaKnown RBP13.67□□□□□ -0.22
RAP1B-221ENST00000540209 TIMM8BQ9Y5J9 83 aaPredicted RBP13.67□□□□□ -0.22
RAP1B-221ENST00000540209 C17orf112F2Z3M2 114 aa13.66□□□□□ -0.22
RAP1B-221ENST00000540209 EXOC3-AS1Q8N2X6 119 aa13.66□□□□□ -0.22
RAP1B-221ENST00000540209 FUT9Q9Y231 359 aa13.66□□□□□ -0.22
RAP1B-221ENST00000540209 NACAE9PAV3 2078 aa13.66□□□□□ -0.22
RAP1B-221ENST00000540209 DNAH17Q9UFH2 4485 aa13.65□□□□□ -0.22
RAP1B-221ENST00000540209 J3KRW8 73 aa13.65□□□□□ -0.22
RAP1B-221ENST00000540209 RPL12P30050 165 aaKnown RBP13.65□□□□□ -0.22
RAP1B-221ENST00000540209 FXYD5Q96DB9 178 aa13.65□□□□□ -0.22
RAP1B-221ENST00000540209 FAM19A4Q96LR4 140 aa13.65□□□□□ -0.22
RAP1B-221ENST00000540209 OR51M1Q9H341 326 aa13.65□□□□□ -0.22
RAP1B-221ENST00000540209 AAMDCQ9H7C9 122 aa13.65□□□□□ -0.22
RAP1B-221ENST00000540209 MBD2Q9UBB5 411 aa13.65□□□□□ -0.22
RAP1B-221ENST00000540209 TRAV12-3A0A0B4J271 114 aa13.64□□□□□ -0.23
RAP1B-221ENST00000540209 CBY3A6NI87 242 aa13.64□□□□□ -0.23
RAP1B-221ENST00000540209 ATP5G1P05496 136 aa13.64□□□□□ -0.23
RAP1B-221ENST00000540209 NBEAP1P0C6P0 100 aa13.64□□□□□ -0.23
RAP1B-221ENST00000540209 ATP5G3P48201 142 aa13.64□□□□□ -0.23
RAP1B-221ENST00000540209 ERCC8Q13216 396 aa13.64□□□□□ -0.23
RAP1B-221ENST00000540209 ICAM4Q14773 271 aa13.64□□□□□ -0.23
RAP1B-221ENST00000540209 C15orf53Q8NAA6 179 aa13.64□□□□□ -0.23
RAP1B-221ENST00000540209 NOP10Q9NPE3 64 aaKnown RBP13.64□□□□□ -0.23
RAP1B-221ENST00000540209 KLLNB2CW77 178 aa13.63□□□□□ -0.23
RAP1B-221ENST00000540209 OR10J4P0C629 311 aa13.63□□□□□ -0.23
RAP1B-221ENST00000540209 RNF212Q495C1 297 aa13.63□□□□□ -0.23
RAP1B-221ENST00000540209 C9orf47Q6ZRZ4 202 aa13.63□□□□□ -0.23
RAP1B-221ENST00000540209 UBE2DNLQ8IWF7 75 aa13.63□□□□□ -0.23
RAP1B-221ENST00000540209 LINC00477Q96M19 166 aa13.63□□□□□ -0.23
RAP1B-221ENST00000540209 PAXXQ9BUH6 204 aa13.63□□□□□ -0.23
RAP1B-221ENST00000540209 SMIM3Q9BZL3 60 aa13.63□□□□□ -0.23
RAP1B-221ENST00000540209 AGPAT4-IT1Q9H0P7 198 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms