RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 SCXQ7RTU7 201 aa5.36□□□□□ -1.55
USP48-212ENST00000527823 NOXA1Q86UR1 476 aa5.36□□□□□ -1.55
USP48-212ENST00000527823 SELENOHQ8IZQ5 122 aaKnown RBP5.36□□□□□ -1.55
USP48-212ENST00000527823 LGI3Q8N145 548 aa5.36□□□□□ -1.55
USP48-212ENST00000527823 C11orf72Q8NBR9 251 aa5.36□□□□□ -1.55
USP48-212ENST00000527823 OR4D10Q8NGI6 311 aa5.36□□□□□ -1.55
USP48-212ENST00000527823 OR4D5Q8NGN0 318 aa5.36□□□□□ -1.55
USP48-212ENST00000527823 DTD1Q8TEA8 209 aa5.36□□□□□ -1.55
USP48-212ENST00000527823 C20orf144Q9BQM9 153 aa5.36□□□□□ -1.55
USP48-212ENST00000527823 HSPB7Q9UBY9 170 aa5.36□□□□□ -1.55
USP48-212ENST00000527823 U3KQ87 197 aa5.36□□□□□ -1.55
USP48-212ENST00000527823 TRGV2A0A075B6R0 118 aa5.35□□□□□ -1.55
USP48-212ENST00000527823 A0A087X0K7 114 aa5.35□□□□□ -1.55
USP48-212ENST00000527823 GABARAPH6UMI1 98 aa5.35□□□□□ -1.55
USP48-212ENST00000527823 B3GALNT1O75752 331 aa5.35□□□□□ -1.55
USP48-212ENST00000527823 GABARAPO95166 117 aa5.35□□□□□ -1.55
USP48-212ENST00000527823 SULT1A3P0DMM9 295 aa5.35□□□□□ -1.55
USP48-212ENST00000527823 SULT1A4P0DMN0 295 aa5.35□□□□□ -1.55
USP48-212ENST00000527823 GPX4P36969 197 aaPredicted RBP5.35□□□□□ -1.55
USP48-212ENST00000527823 DAZ2Q13117 558 aaKnown RBP5.35□□□□□ -1.55
USP48-212ENST00000527823 WFDC2Q14508 124 aa5.35□□□□□ -1.55
USP48-212ENST00000527823 RNASE10Q5GAN6 216 aaKnown RBP5.35□□□□□ -1.55
USP48-212ENST00000527823 LYPD5Q6UWN5 251 aa5.35□□□□□ -1.55
USP48-212ENST00000527823 MARCH1Q8TCQ1 289 aa5.35□□□□□ -1.55
USP48-212ENST00000527823 GPR82Q96P67 336 aa5.35□□□□□ -1.55
USP48-212ENST00000527823 RBKSQ9H477 322 aa5.35□□□□□ -1.55
USP48-212ENST00000527823 NAA60Q9H7X0 242 aa5.35□□□□□ -1.55
USP48-212ENST00000527823 PPP1R14DQ9NXH3 145 aa5.35□□□□□ -1.55
USP48-212ENST00000527823 LINC00854A0A1B0GVQ3 168 aa5.34□□□□□ -1.55
USP48-212ENST00000527823 PRSS46E5RG02 174 aa5.34□□□□□ -1.55
USP48-212ENST00000527823 J3KRW8 73 aa5.34□□□□□ -1.55
USP48-212ENST00000527823 ZNF324O75467 553 aaPredicted RBP5.34□□□□□ -1.55
USP48-212ENST00000527823 IGHV3-53P01767 116 aa5.34□□□□□ -1.55
USP48-212ENST00000527823 CD3DP04234 171 aa5.34□□□□□ -1.55
USP48-212ENST00000527823 CRYGDP07320 174 aa5.34□□□□□ -1.55
USP48-212ENST00000527823 ORM2P19652 201 aa5.34□□□□□ -1.55
USP48-212ENST00000527823 PSG3Q16557 428 aa5.34□□□□□ -1.55
USP48-212ENST00000527823 IZUMO2Q6UXV1 221 aa5.34□□□□□ -1.55
USP48-212ENST00000527823 C9orf47Q6ZRZ4 202 aa5.34□□□□□ -1.55
USP48-212ENST00000527823 PRR26Q8N8Z3 221 aa5.34□□□□□ -1.55
USP48-212ENST00000527823 RPUSD4Q96CM3 377 aaKnown RBP5.34□□□□□ -1.55
USP48-212ENST00000527823 TMEM147Q9BVK8 224 aa5.34□□□□□ -1.55
USP48-212ENST00000527823 FUT9Q9Y231 359 aa5.34□□□□□ -1.55
USP48-212ENST00000527823 TRAV9-2A0A087WT02 112 aa5.33□□□□□ -1.56
USP48-212ENST00000527823 TRGV1A0A0A0MS02 117 aa5.33□□□□□ -1.56
USP48-212ENST00000527823 TEX13DA0A0J9YY54 714 aaPredicted RBP5.33□□□□□ -1.56
USP48-212ENST00000527823 CRYM-AS1A6NIL9 109 aa5.33□□□□□ -1.56
USP48-212ENST00000527823 PRAC2D3DTV9 90 aa5.33□□□□□ -1.56
USP48-212ENST00000527823 K7EP13 123 aa5.33□□□□□ -1.56
USP48-212ENST00000527823 MRPS12O15235 138 aaKnown RBP5.33□□□□□ -1.56
USP48-212ENST00000527823 PSCAO43653 123 aa5.33□□□□□ -1.56
USP48-212ENST00000527823 CFDP00746 253 aaPredicted RBP5.33□□□□□ -1.56
USP48-212ENST00000527823 MT1HL1P0DM35 61 aa5.33□□□□□ -1.56
USP48-212ENST00000527823 EVI2AP22794 236 aa5.33□□□□□ -1.56
USP48-212ENST00000527823 HNRNPA3P51991 378 aaKnown RBP5.33□□□□□ -1.56
USP48-212ENST00000527823 CRYBA4P53673 196 aa5.33□□□□□ -1.56
USP48-212ENST00000527823 SCGB2B2Q4G0G5 96 aa5.33□□□□□ -1.56
USP48-212ENST00000527823 FAAP20Q6NZ36 180 aa5.33□□□□□ -1.56
USP48-212ENST00000527823 CCDC190Q86UF4 302 aa5.33□□□□□ -1.56
USP48-212ENST00000527823 CROCCP3Q8IVE0 287 aa5.33□□□□□ -1.56
USP48-212ENST00000527823 BPIFCQ8NFQ6 507 aa5.33□□□□□ -1.56
USP48-212ENST00000527823 ST6GAL2Q96JF0 529 aa5.33□□□□□ -1.56
USP48-212ENST00000527823 RTBDNQ9BSG5 229 aaPredicted RBP5.33□□□□□ -1.56
USP48-212ENST00000527823 SHANK2-AS3Q9BTD1 123 aa5.33□□□□□ -1.56
USP48-212ENST00000527823 GSN-AS1Q9NRJ2 163 aa5.33□□□□□ -1.56
USP48-212ENST00000527823 TMEM56-RWDD3S4R434 201 aa5.33□□□□□ -1.56
USP48-212ENST00000527823 TRAV12-3A0A0B4J271 114 aa5.32□□□□□ -1.56
USP48-212ENST00000527823 SLC17A3O00476 420 aa5.32□□□□□ -1.56
USP48-212ENST00000527823 SPINK4O60575 86 aa5.32□□□□□ -1.56
USP48-212ENST00000527823 TNFAIP8O95379 198 aa5.32□□□□□ -1.56
USP48-212ENST00000527823 APOA1P02647 267 aa5.32□□□□□ -1.56
USP48-212ENST00000527823 IAPPP10997 89 aa5.32□□□□□ -1.56
USP48-212ENST00000527823 RPL7P18124 248 aaKnown RBP5.32□□□□□ -1.56
USP48-212ENST00000527823 TBPP20226 339 aa5.32□□□□□ -1.56
USP48-212ENST00000527823 SMCO1Q147U7 214 aa5.32□□□□□ -1.56
USP48-212ENST00000527823 GPR107Q5VW38 600 aa5.32□□□□□ -1.56
USP48-212ENST00000527823 GGNBP1Q5YKI7 109 aa5.32□□□□□ -1.56
USP48-212ENST00000527823 NEGR1Q7Z3B1 354 aa5.32□□□□□ -1.56
USP48-212ENST00000527823 C10orf126Q8N4M7 172 aa5.32□□□□□ -1.56
USP48-212ENST00000527823 LRTM2Q8N967 370 aa5.32□□□□□ -1.56
USP48-212ENST00000527823 ZNF680Q8NEM1 530 aa5.32□□□□□ -1.56
USP48-212ENST00000527823 OR52I2Q8NH67 350 aa5.32□□□□□ -1.56
USP48-212ENST00000527823 OR1S1Q8NH92 325 aa5.32□□□□□ -1.56
USP48-212ENST00000527823 TERB2Q8NHR7 220 aa5.32□□□□□ -1.56
USP48-212ENST00000527823 ZFAND1Q8TCF1 268 aa5.32□□□□□ -1.56
USP48-212ENST00000527823 VGLL1Q99990 258 aa5.32□□□□□ -1.56
USP48-212ENST00000527823 PYGO2Q9BRQ0 406 aa5.32□□□□□ -1.56
USP48-212ENST00000527823 MRPL16Q9NX20 251 aaKnown RBP5.32□□□□□ -1.56
USP48-212ENST00000527823 PRO0255Q9UI72 69 aa5.32□□□□□ -1.56
USP48-212ENST00000527823 K7EQD1 137 aa5.31□□□□□ -1.56
USP48-212ENST00000527823 TCL1AP56279 114 aa5.31□□□□□ -1.56
USP48-212ENST00000527823 NEDD8Q15843 81 aa5.31□□□□□ -1.56
USP48-212ENST00000527823 MRPL23Q16540 153 aaKnown RBP5.31□□□□□ -1.56
USP48-212ENST00000527823 LINC01620Q4KN68 170 aa5.31□□□□□ -1.56
USP48-212ENST00000527823 STEAP1BQ6NZ63 245 aa5.31□□□□□ -1.56
USP48-212ENST00000527823 ACOT7LQ6ZUV0 252 aa5.31□□□□□ -1.56
USP48-212ENST00000527823 ZBTB8BQ8NAP8 495 aaPredicted RBP5.31□□□□□ -1.56
USP48-212ENST00000527823 Q9HAA7 133 aa5.31□□□□□ -1.56
USP48-212ENST00000527823 ZNF331Q9NQX6 463 aaPredicted RBP5.31□□□□□ -1.56
USP48-212ENST00000527823 COMMD3Q9UBI1 195 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms