RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 GUK1Q16774 197 aa12.14□□□□□ -0.47
CCS-203ENST00000526058 FAM222AQ5U5X8 452 aa12.14□□□□□ -0.47
CCS-203ENST00000526058 HSPB11Q9Y547 144 aa12.14□□□□□ -0.47
CCS-203ENST00000526058 YTHDF2Q9Y5A9 579 aaKnown RBP12.14□□□□□ -0.47
CCS-203ENST00000526058 IGHV4-4A0A075B6R2 117 aa12.13□□□□□ -0.47
CCS-203ENST00000526058 PET100P0DJ07 73 aa12.13□□□□□ -0.47
CCS-203ENST00000526058 PYYP10082 97 aa12.13□□□□□ -0.47
CCS-203ENST00000526058 RPP25LQ8N5L8 163 aaKnown RBP12.13□□□□□ -0.47
CCS-203ENST00000526058 SLC25A2Q9BXI2 301 aa12.13□□□□□ -0.47
CCS-203ENST00000526058 PARD6GQ9BYG4 376 aaPredicted RBP12.13□□□□□ -0.47
CCS-203ENST00000526058 SMIM3Q9BZL3 60 aa12.13□□□□□ -0.47
CCS-203ENST00000526058 TMEM14CQ9P0S9 112 aa12.13□□□□□ -0.47
CCS-203ENST00000526058 MBD2Q9UBB5 411 aa12.13□□□□□ -0.47
CCS-203ENST00000526058 FRAS1Q86XX4 4008 aa12.13□□□□□ -0.47
CCS-203ENST00000526058 TRBV19A0A075B6N1 114 aa12.12□□□□□ -0.47
CCS-203ENST00000526058 NDUFB4O95168 129 aa12.12□□□□□ -0.47
CCS-203ENST00000526058 PTTG1O95997 202 aa12.12□□□□□ -0.47
CCS-203ENST00000526058 RPL12P30050 165 aaKnown RBP12.12□□□□□ -0.47
CCS-203ENST00000526058 KIR3DS1Q14943 382 aa12.12□□□□□ -0.47
CCS-203ENST00000526058 MIR17HGQ75NE6 70 aa12.12□□□□□ -0.47
CCS-203ENST00000526058 ATP5SQ99766 215 aa12.12□□□□□ -0.47
CCS-203ENST00000526058 ZNF253O75346 499 aa12.11□□□□□ -0.47
CCS-203ENST00000526058 HIST1H1EP10412 219 aaKnown RBP12.11□□□□□ -0.47
CCS-203ENST00000526058 AZU1P20160 251 aa12.11□□□□□ -0.47
CCS-203ENST00000526058 CDKN1BP46527 198 aa12.11□□□□□ -0.47
CCS-203ENST00000526058 OR10J6PQ8NGY7 276 aa12.11□□□□□ -0.47
CCS-203ENST00000526058 BLNKQ8WV28 456 aa12.11□□□□□ -0.47
CCS-203ENST00000526058 FAM167A-AS1Q96KT0 104 aa12.11□□□□□ -0.47
CCS-203ENST00000526058 LINC01587Q99440 93 aa12.11□□□□□ -0.47
CCS-203ENST00000526058 NIPSNAP3BQ9BS92 247 aa12.11□□□□□ -0.47
CCS-203ENST00000526058 DNAH6Q9C0G6 4158 aa12.11□□□□□ -0.47
CCS-203ENST00000526058 M0R3E3 92 aa12.1□□□□□ -0.47
CCS-203ENST00000526058 CT45A10P0DMU9 189 aa12.1□□□□□ -0.47
CCS-203ENST00000526058 TIMM9Q9Y5J7 89 aa12.1□□□□□ -0.47
CCS-203ENST00000526058 TEX48A0A1B0GUV7 120 aa12.09□□□□□ -0.47
CCS-203ENST00000526058 C17orf112F2Z3M2 114 aa12.09□□□□□ -0.47
CCS-203ENST00000526058 HTN1P15515 57 aa12.09□□□□□ -0.47
CCS-203ENST00000526058 FCN2Q15485 313 aa12.09□□□□□ -0.47
CCS-203ENST00000526058 EXOC3-AS1Q8N2X6 119 aa12.09□□□□□ -0.47
CCS-203ENST00000526058 WFDC1Q9HC57 220 aa12.09□□□□□ -0.47
CCS-203ENST00000526058 KCNIP2Q9NS61 270 aa12.09□□□□□ -0.47
CCS-203ENST00000526058 PLAC8L1A1L4L8 177 aa12.08□□□□□ -0.48
CCS-203ENST00000526058 NPIPB6E9PJ23 425 aa12.08□□□□□ -0.48
CCS-203ENST00000526058 TAS2R60P59551 318 aa12.08□□□□□ -0.48
CCS-203ENST00000526058 PDE6HQ13956 83 aa12.08□□□□□ -0.48
CCS-203ENST00000526058 OXA1LQ15070 435 aa12.08□□□□□ -0.48
CCS-203ENST00000526058 TMEM256Q8N2U0 113 aa12.08□□□□□ -0.48
CCS-203ENST00000526058 MED28Q9H204 178 aa12.08□□□□□ -0.48
CCS-203ENST00000526058 OR51M1Q9H341 326 aa12.08□□□□□ -0.48
CCS-203ENST00000526058 FUT9Q9Y231 359 aa12.08□□□□□ -0.48
CCS-203ENST00000526058 J3KRW8 73 aa12.07□□□□□ -0.48
CCS-203ENST00000526058 IFNA5P01569 189 aa12.07□□□□□ -0.48
CCS-203ENST00000526058 OR10J4P0C629 311 aa12.07□□□□□ -0.48
CCS-203ENST00000526058 TSPOP30536 169 aa12.07□□□□□ -0.48
CCS-203ENST00000526058 DAD1P61803 113 aa12.07□□□□□ -0.48
CCS-203ENST00000526058 ERCC8Q13216 396 aa12.07□□□□□ -0.48
CCS-203ENST00000526058 FFAR4Q5NUL3 377 aa12.07□□□□□ -0.48
CCS-203ENST00000526058 GFI1BQ5VTD9 330 aa12.07□□□□□ -0.48
CCS-203ENST00000526058 SCGB1C1Q8TD33 95 aa12.07□□□□□ -0.48
CCS-203ENST00000526058 MRPL53Q96EL3 112 aaKnown RBP12.07□□□□□ -0.48
CCS-203ENST00000526058 MRPL32Q9BYC8 188 aaKnown RBP12.07□□□□□ -0.48
CCS-203ENST00000526058 BIRC6Q9NR09 4857 aa12.07□□□□□ -0.48
CCS-203ENST00000526058 NBEAP1P0C6P0 100 aa12.06□□□□□ -0.48
CCS-203ENST00000526058 HTN3P15516 51 aa12.06□□□□□ -0.48
CCS-203ENST00000526058 FXYD5Q96DB9 178 aa12.06□□□□□ -0.48
CCS-203ENST00000526058 ZNF503Q96F45 646 aa12.06□□□□□ -0.48
CCS-203ENST00000526058 NDUFAF3Q9BU61 184 aa12.06□□□□□ -0.48
CCS-203ENST00000526058 PAXXQ9BUH6 204 aa12.06□□□□□ -0.48
CCS-203ENST00000526058 DNAH2Q9P225 4427 aa12.05□□□□□ -0.48
CCS-203ENST00000526058 LYRM9A8MSI8 78 aa12.05□□□□□ -0.48
CCS-203ENST00000526058 H7BYZ3 331 aa12.05□□□□□ -0.48
CCS-203ENST00000526058 EIF3GO75821 320 aaKnown RBP eCLIP12.05□□□□□ -0.48
CCS-203ENST00000526058 ICAM4Q14773 271 aa12.05□□□□□ -0.48
CCS-203ENST00000526058 RNF141Q8WVD5 230 aa12.05□□□□□ -0.48
CCS-203ENST00000526058 ODF3Q96PU9 254 aa12.05□□□□□ -0.48
CCS-203ENST00000526058 AAMDCQ9H7C9 122 aa12.05□□□□□ -0.48
CCS-203ENST00000526058 PRELID1Q9Y255 219 aa12.05□□□□□ -0.48
CCS-203ENST00000526058 DEFB130BP0DP73 79 aa12.04□□□□□ -0.48
CCS-203ENST00000526058 DEFB130AP0DP74 79 aa12.04□□□□□ -0.48
CCS-203ENST00000526058 LEPP41159 167 aa12.04□□□□□ -0.48
CCS-203ENST00000526058 Q5BKY6 102 aa12.04□□□□□ -0.48
CCS-203ENST00000526058 FAM122CQ6P4D5 195 aa12.04□□□□□ -0.48
CCS-203ENST00000526058 PHYHIPLQ96FC7 376 aa12.04□□□□□ -0.48
CCS-203ENST00000526058 C16orf74Q96GX8 76 aa12.04□□□□□ -0.48
CCS-203ENST00000526058 C20orf144Q9BQM9 153 aa12.04□□□□□ -0.48
CCS-203ENST00000526058 AGPAT4-IT1Q9H0P7 198 aa12.04□□□□□ -0.48
CCS-203ENST00000526058 IGKV2-40A0A087WW87 121 aaPredicted RBP12.03□□□□□ -0.48
CCS-203ENST00000526058 TRAV12-3A0A0B4J271 114 aa12.03□□□□□ -0.48
CCS-203ENST00000526058 OR7C2O60412 319 aa12.03□□□□□ -0.48
CCS-203ENST00000526058 IGKV2D-40P01614 121 aaPredicted RBP12.03□□□□□ -0.48
CCS-203ENST00000526058 RNASE8Q8TDE3 154 aaKnown RBP12.03□□□□□ -0.48
CCS-203ENST00000526058 TMEM263Q8WUH6 116 aaKnown RBP12.02□□□□□ -0.49
CCS-203ENST00000526058 FAM19A4Q96LR4 140 aa12.02□□□□□ -0.49
CCS-203ENST00000526058 LINC00477Q96M19 166 aa12.02□□□□□ -0.49
CCS-203ENST00000526058 VGLL1Q99990 258 aa12.02□□□□□ -0.49
CCS-203ENST00000526058 RANP62826 216 aaKnown RBP12.01□□□□□ -0.49
CCS-203ENST00000526058 UBE2L3P68036 154 aaKnown RBP12.01□□□□□ -0.49
CCS-203ENST00000526058 TMEM88Q6PEY1 159 aa12.01□□□□□ -0.49
CCS-203ENST00000526058 ZNF493Q6ZR52 646 aa12.01□□□□□ -0.49
CCS-203ENST00000526058 C9orf47Q6ZRZ4 202 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms